ClCG01G010760 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G010760
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CG_Chr01: 16854803 .. 16867088 (-)
RNA-Seq Expression	ClCG01G010760
Synteny	ClCG01G010760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGATGAGTTCAAAAGAGAGATGGCAAAGGAGTTTGAAATGAAAGACATTGGTCTCATGAGTTACTATCTTGGGATTGAGGTCAAACAAGGTGAAGATGAGATTTTTATATCCCAAAAGGGCTATGCTAAAAAAGTGCTCAAAAAGTTCAATATGAATAATGCTAATATAGTTGGAACACCGATGGAATGTGGAGTCAAAATCACCAAGCAAGATGGAGGAGAGAAGGTAAATTCTACATATTTCAAAAGCTTGGTTGGAAGTTTGAGATATTTGACATGTAGAAGACCGGATATTCTTTATTTGGTTAGAATGATTAGTCGATTCATGGGGGAATCGACAACAACACATTACAAAATGGCAAAAAGGATACTTCGTTACATCAAAGGGACGATTGGGTATGGTCTTTCCTATGTCTCTTCTAGCAATTTTGATATTGTTGGTTATTGTGATAGTGATTGGAGTGGTGATTTGGATGATCGAAAGAGCACTACGGGGTTTGTGTTTTTTATTGGTGAAACGACGTTCACATGGATGTCAAAAAAGCAACCCATAGTCACATTATCAACATGTGAGGTAGAGTACGTCGCAGCAACTTCATGTGTATGTCATGCAATTTGGCTAAGAAACTTAGTGAAGGAGTTGAAGTTTCAAATGGAAGGTCCAATGAAAATTTTTGTTTACAATAAACGGCCATTGCCTTAGCCAAAAATCCAGTATTTCATGGGAGGAGCATGCACATTGATACTCGATTTCACTTCATTCGGGATTGCATTACGAAGAAAGAAGTGAAACTCAAATATATCAAGTCACAAGACCAAGCGGCGGACATCTTCACAAAGCCCCTCTAGTTGGAGATTTTTATCAAAATGANGGGGGGGGGGGGGAGTGGGAGAAATGAAAGGTTTGTCATTATTAAACTTTATTTGTGGCATTTAGTGTGATTTTTGGGTTTTGTGTCTTTTAGTTTTTTGTAACCAATAGTGACCCTTGAATTATAGAAATTATGTGAGTTATGAGCATTTGATAACATTTATAACTTTAAACCATTGACATTCCTATGGTTATGATTTTAAGCCTACATAAAGGTATGCTTAGTTGAATGGAAAATGTATCTCTCATTCTCATATTTGTTCTCCACGTTTTTTTTTCCTAACACCTTTTAGAATTTATGTTTTCAAATACTTTTTATCTTTTTAAAAAATTATTACACCTAAAAATGGTCATTAGATTTATAAAAAAAAACTCATAGGTTGACACAAAAAGTCATCACAAAATCACTCATTTGTAAAATTCCATTGTATTAGAGAAAGTTATTTGCTTCTCCCAAATTTTCTCCGAAGATTAATTCAAACCAAAATAAAACAACGAAAAAAATAAGCTGGAATTATTGTTTTGGAACTCAACATCTTCTTAAAACATAATTAAAAATTATAATTATAAAAAGAAGGATAGTCCTAGTAACAATCAAACCTAGTCTTGACTCTTGAGTGATCATTAGCATCTATTGGTAGGAGCTATTTTCGTTGAAATTTTCTTTTGTTACAAAGAGTAACAACAAATCGAGGCATTAAAAAAATAACAAAGAAATACCTAAATATGAATCTTAACAAAGTTGCTGCAATGCCTTGAGAATGTTGGAAAATTCTCCTAACATTTTCTAAAATGTTAACAATGTCATAGATGCGTCACCTCTCAATATTTACTAAATGCAAGTCACAAAAAATCGTCCAATTAACCAAAGTAAAAATTTTAAGAAAAGAGAGGAAAAAAGAACTTGGAGTTGTCGTTTTGGAATTGACACTCCATCGTATTAGTGACGTAGAGTTTAGAGTTATATACACTTTAGTTGATAATTTAGAAATGATTGCTAGTCGACAAAAACAAGATTCTACACCGACTTAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAAAAGGTAGGCTAGTGTGGCTTCGTTGGATGATTCTTGGGAGAATGCAAGATTCACTCCTCTTTTCGTGAACTTTGTCTAGTGGGTTTCTATAAGTCACAAATAAAATGAAATTTCAACTTCAATTTCTGGAATTTGAAAAAGGAGTAATTTGAATTTAATTTGATAATTGAAATTATACTTGCAAAATGCACCGAACATTCTAAATCACAAGTCCAGATAAATTAACTTAGAGATTATTTAAAATCATTTTCCAAACTTCGGACACTAAAAATGTGACAGGTAAACCATCAAAATCAAATAGCTGCAAAACTTAAACTTTATGAACCAAAAATATACTTTTTCCTATAAAATATGCATCGAGATAAATATAGAAATATTACATTCTCGTGACTATTTAAAAATTAATGAAAAAACTCTAATTATTCAAATCAAATCATATTATCAATAATGGGTAAGTTCATCGGATTTTTAACCATTGTTTTTTTAGAGTTAAACAAGAAGTAAAATTGGAGGGGCTTAGAAAATAAAACTGTGAGAATGGATTTTGAGACTTGAGCTTTTAAATTAAAAATGTTGCTTGATGGACTTAATAATTAGGAGATAAAACACTAAAAACAATGGTTAAAAACATATATCACAACAAGTGAGTGATGTGATATTCCCTGTAAATATATTCAAGAAAAATTAATTATTTACAACTATTTATAATAATGTACATGCATTAGACATTAATCACATATAGATAAATTAAAAATTATTAGCATCAGCCAAGTCTTATTAAAAATTATAAGAGGCAGTTGCTTACACAAATATTTGCAATAACATTATATTCACCATCTTCAAATAAACACAACATATGTAGGGAAGGAGAAATGACACTGCTTAACTTTTTCTATTTGAGATGAAAACTTGAAAATTAATAAAGTTTTTAATGAAATGATAACATTGAAAAAAAATTAGTCCAATATATAATATGGTTTTTATAAAGAGTCAGAAGAAAAAACAAATGACATTTTTATCTTATGCCTTGGTCGGGGCTACAAGTTACACCAATTATATTGATATTGGAAGATCTGTTAATAAAGACAATACAATCATCACCTATATTTTTCTTCAATATAATTACAGGATAGATATGAATATGTAAGGAGGTTTGACCATCAAATTGTCCACCTCCTTTGAGATTCAAACCTTCTTGTGTCAAAAAAATTGGACCCATTAATTATTTGCACCATCACTTGGCCATTCATCCTTACTTGGAGCCATTACAGTTCCGCTAGGCTACAAAAACATAATACAAGAAAAATTTAAAATAATTGAAAGTTACTACGTATACAAATAAAGAATTTTAAATCCTAATCCGAATCCTGTGTTTGGGGTTGTTATAAGAAGATTCAATAAAAAAGAAAAGATGGTGAAAATGAATGAATATGACATTTTTTAAACATTGAGAACCTTAGAAGTAAAATGAGAAATTAATGAAGATTAGAAAAAGAAGGTATCAATGTAATATAATTGGGATTTGGTTCAAATAATAGAGCAAATATCCATATATAGATTAGTACTTCTGCTTTTTAGCCTCTTGTGTTTCTTTGAAATGTATTCAAATGCTATAAATAAGTCACAATATGAATGCATTTATTTTATGTGATTTTCATATATATATATATATAACAAAATGTTACTGTCTATCCATGATAAACAATGATAGACACTAATAGACATCTATCAATGTCTATCACTAATAGATAGTGATAGATGATAGTAGTTTATCTATGCCTATCAATCTATCGGTACATTTTGCTATAATTGTAAATATTTGGGTTCATTTTGCTATATTTGAAAACAACTCATTAATCGTTTTTATTTTAGATGATTAATCAATGAGTTGACTAATTATTTAATTTTATTAATTCTTTTTTCCTATTGAAGAATTTATTTCGGAGAAATTACTATAAAAAATATAATAGTTTGTGTGTATAGGTATGGCATGGGACATCGAAATGTGAGTCAATTTAATTTCGTCCAAATTTGTAGAAATACAAACTTAATTTTGTTGGATTTATTTCATGCCTCAGATTTACTACTCCCCGAACCACATCCTACTAGGAGAGGTTCCACTCTCATACCATCTATAACAAGGTCAGGATTAGGAAATCTGAATTCTGCACCTGATGGTTCCAACATTAACGTCATCTTTGCTTATCTTAAATGCTTCTAAGAGTGAAGACTATCCGCAGGAGGTCACCCAACATAAAATTATTCCAAACTAAGCACACTTAACTTTGAAGTTTCTATGATTGAGCTAACGAAAAAGAAGTTACACCTTGTTGATATGGGTAATAACTTTTAACTCTATTAAGCTTTTCTTAACCATACTTTCATATCTTCAAGATCCCTCTCATTCAGATGTGATCTCGGTTCATTCATGTACTCCTCCTAAACTCGGGTCGTTATAGTCTCTAAAGTTTAAAAACTGCACTTTAGTTACCGTTTAAAAAAAAAAAAGTGTCCGATTTAGTTAAGGTATATAAATACTCTCATTTTTCTCATATTTGTCTAATTCTTACACCAATTTGTCACAACAAAATATAAATCACAACTTCAAGTTAAAGCATAAAATCCTACAAAACTCCAAAAATAAAATTCTCCCATAAAACTCACCAAAACTATAAATAGCCAAATACAAAAAGAATGTATTTGGCTATTAAACATACACTCAACTACTAACTTATAATCTTATTAAAACATATAAGTCTGAAGGCCCCTAATCTGATGCTTCCATTANTAAACAATCTTATACAATGTTAAAAGAGAAAGAAACTACCTTTTGACAGTCGGTGAGGGCTCGAGGTGGCGGTTGAGACAGCTGGAACGACGGACAACGACTATGTGGAAAAAAAATCACACAAATAAATATAAATCAAATCCAAGCAATATTATCACATAAAACCTAAACAATACTATCTTATAAATCAAATCTAAACAATATTATCACATAAAATAAATTTAAAAAATATTTCACAAAGTCATGGACCCGATCCTCGAATATCCTTGTAAAAAATAATTCTAAATCTAAATCTAAACAATAATATATTCATATTTTTATAAAAAAATAATCATAAATTTAAACAATATTATACCATATTAAAAGAGAAATATAATACCTTCTAGCCTTCGGTGAGGGCTCAGGGTGGCGGTGGAGACAACTGGAACGGATGGCGGCGATGGCGACGGGAAGAAAAGGTCTTGAGTGAAGGAAGATAAGTGGGGAGGAGAGGATGTGGGGAAGAAGGGCTCTCGAGTGGATTGAAAGAGATGAAAATCGTGGACCCCGTCCACGATTCTTATCCCTGCCAAATGGCAGACATGCTCCAGCACGGCAGCCAACAAGGTAGGCAACTTTTGACAAGATGAAAATCGTGGACAGGGTCCACAATTTTCCCACCTATTTTTGTCATTTGTTTTCCCTCTACCCTATTTCTGTTATTATTTATTAAAATAATATTATTTTTAAAAAATTTTTAAAATTTGAGATTTAATAATTAAAAAATTAAAAAAAGTTTTTTTTTTTTAAGGTATATTATCTTTTTCAATTTTTTTCTTTTACGTGAATTGTGTTGTTTAACTTTGGGAGAGATTGAGATTTAGCTTGAATAGTTTTTAAAATAAAATAATTTTTTTTTTAAAAGAAAGTTAAAATAATAGCTATAAACATATTAGAAATAGGTTCCTATTTCTAGTCATGGTGATTAGCTTTTATTTTAAAGTTTTCTTATTATAAATGTAAATATTATTAGTTTATTTCTTCGTTTACTATTAAAAATTTAAACTACCAGATCAAAGATCAATTCGAAAGCTTTTAAAAAATAGTTCTAAAAAACATAATAATTCAAACTAGTTTTGAGTAATATGAAAAAAAAAAAAAAAAAAAATTTAAATCCTTCTTCCGTTAGTACTCTTAGCCTTGAAGAAAAAAAAATTCAAATGCTTCTACCGTTCATATAGTGATCAATTTGTTTGAAGTTTTATTGAGTTTGAAAAGAAACAAGTTTAAAACAAATTATTTAGATATATTTTTTTTTTTTTTTTCATATAAATACTCTCATTTGTCCAATTCCTATGTCAATTTTGTCACAACAAAATATAAATCACAACTTCAAGTTAAAGCATAAAATCCTACAAAACTCCAAAAATAAAATTATCCCTTAAAACTTACCAAAATTATAGTTAGTCAAATACAAAAAGATCATATTTGACTATCAACATACACTCAACTCCTAACGTATAATCTTTTTAAAACATTTTTCTCATTTGTCCAATTTTTACACCATTTTTGTCACAACAAAATATAAACTACAACTTCAAAATAAAGCATAAAATCCCACAAAACTCCAAAAATAAGATTCTCCCCTTAAAACTTACCAAAACTATAAATATTCAAATACAAAAATAACGTATTTGGCTATTAACATATACTCAACTACTAACATATAATCTTATTAAAACAAAGTCTAAGACCCCTCTAGTGCTTCCATTTTTTTTTTAATGAGATCAACAAAAGGTTAAACAATTAACAAGAAGGAGAGTAACATAGGAGAGGAAAAAAAAAAAAAAAAGAAAGAAAGAACAGAGAAGTGATAGATTATAGGTTATAGATTGAAGTAGGGGAGAGAAAAAAAATGGAAGAGGTGATGAGGTGTAGATAAACAGTAATAGTATTTTTAACTTTTAGTTTTTTTACATACGGGTACTAACGCAACTTTTAAAAGTTTATAGGTATTTATGTAAGAAGTATTAATAGTTTTGTTCATAGTATTAATTATAAGAGTATTTTTGAAATTTTCTTTTAAGTTTAAGGGTAGTTTGAAACTTTTGAAAGTTTAAAGGTATTTTTGAAACAAAAAAACTAACAGTTTTTCATCCAAAACTAATTGTAGTAGTGTTTTTGAACTCTTATTGAAAGTTTAAAAATATTTTTGAAACTTTTAAAAGTATAAAGGTATTTTTATACAAACTACAAAGTTCAAAGACGTATGGTATAATTTAACCTTAATATTTTCAAATAAAATTTGGTAAGATTTATACCATGTAATCTCATTTCTATCCTTCTAACATTTTAGTTTTACTTTTAAACTTAAAAAAAATGTTACATCTTTGTTTGGCGCCTCATGATAACATGTTGACACATGCCATTTATTTGTTAAAACCAAAATAAAGATAAAAGTTCAAATAATTTTAATTAACTTAATTACCAGTTTAGTGTTTCAACTTTTAAATTTAAGTTTAGTCTTTGATATATTTATATAAGTTTAGGATTTAAATTGATTTAATTATTAATTAATTGTTATAATCTAAAGTTTAGTGTCGTAAATTGATATTGTTTCAAAATATTGTCAAATCAAACCTCATAGATCAAAATATAATTTTCAATTTTTAGTCCCTGAGTTTTGGGTCTAATTCCTATATGATCCCTGCGTTTTAAAGTGTTATACATTTAGTCCTTAAGTTTTGAGTTTGGTTTCAATTTAGTCATTAGGTTTCAAAATGTTACAATTTCACCCTTGACATTTGAATTTTGTTTAGATTTCAAAATTTACATTTTTAGCCTTGGTTTTTTCCTAAATACTAATTTTTCATCTTTAGTGTCAACGTATGTTAATAAATTTACAATAGTCAACTTAATTATAATTAATTAAGTCTCACTGGTTTTCATCACTTCTAAAATAAAAGTTGAAATTTTCACTTCATAATTATTTTAAATCAATTTATAGGCATTGATAATGAATTTTTAATGAAAATTTAAGGTAAAAAATGTAAAATCTTCAAATCTATGGACTAAGTTGAAACAAAACTTAAATTTCAAAAGTAAAATTGTAACATTTTGAAACTTATGGACTAAATTGGAACAAAAACTAAAATTTAAAGACTAGATGAGAAACATTTTGAAATGCAAGTACTCGATAGAAACTAGACCGAAACCTAGAGGTCTCAAAATAGTACTTTTTTTTTTTTTTGAAATGCCCAATAAATATCTAATATGTGTATATATATTTTGAAATATTAACAAATTTTTAAAATTGGAAAACTTTTTTTGGGCATAAAATGGAAAGTTTGAGAGCTCCAAAATTGTGAGTCTTCTCAAGAGGACTTGAAATAACGGCGATATAACCCATCGCAGTTTCAATTTCAAGTTGGGCGGACGCGAATATTTCCACCACCATAAAGTTAGTAGCTGCAACTCCTGTGAGTAAATAGCTTCAATTTCTATCGTTTACTTCCTCTTTCTTGCTCTTCTTTTGCAATTCTACAGCTTCCTTGTCTTTCTACACGATTTTGGGTGAAAATTGGTTGGTTTATGAGAGTGAAAGCCTGAAAGGGGAGGGGACTCAAGGAATCTGGATTTTTAGATGCTTAGTTTTTTTTGTTAATTTAGGTTGCTGATTGATTTCGTCCTGTTGCTTGTGCTACCATAGATTCCATTTGTGGTTTCTCTGTGTTCCTTTTAAGCAGTGTGCAGTGTAGAGTAATGGACCCTTGAATATAGAGTTGGTTTCTGCAACTTCTTGGAAACAGGATATGCTGAGTTCAGTAGATTAGGTCATTGGAAGTTGAAAGATGGTTTGATTCTATGAATGCTCCCAACGGGCGGCTTTGGTTGTAATTAATGTGGGAGTTTAGCTGAAGGGTTGGGTTTAAGCATCCGAGTGGAATGTTGTGGATTTCTAAACCAGAGAAAACTCTAGCGGTTTGTTGGAAAATTGGAGTTGATATTATGACTTGCAATGTCTTTATGTTAAGCAGCTGGCCAAATACCATGGATATCAAAGGAAAATTTGTGAAATGTTCAATTTGAAGCTTCATCCCATAACTTCATGGTTGTGTCTAACGAGTCCTATACTTTAAATGTATGTAGGGGACATTTGGGGCGCTGACTTGATTATTATAGTTTTTGGTTCTTATAGTCAATAGGTTATAATAATCAATAGATTATAATAGTTAGTATTTGGGGTGCTGACTAATTTAGTCTGAGTTATAATAGTTTGTGTTCGGGGTGTAATTTATTTTTATTTGCGTATGAAATAGTAAACACAATAGCAAAGAAGAAAAGAAAGGATGAGTGAAAAATAGTAAATACTTTAACAAAGAGGGTTTTGAAATAGTATTTACTAAATTGTAGGTTATAAGTAGTTATATACACCACTATTATATTTGGTGCCCATAACATGGAGTGAGCTATAATAATCCACTCCACCAACTTCTAGTGGGTGCCCCAAACCCCTTAATAGGTTAACTTTCAATTTTGTTTCTAACAAATCTTGAACTTTAAAAAGTGCCTAACAGGTTGTTATTTGTTAAAACTTTCAATTTTGTGTTTAATAGGCCCCTAACCTATTTAGTGTATTTCTAAAAAAATTGTGGACATGCTAGACACAAAATTGGAACATTAGGTTCCCATTAGACACAAAATTGAAAGTTGGAGGAGAGACCTATTAGATACATTTAAAGTTGATGAAACTATTAAGCATGAAATTGAAAGGTTAAAGACCTACCATATACTATTAAAAGATGTTGGACCTATGAGACACAACTCCCAACTGTTTAGGGGCTAAGCTTCTAATTTAACAAAGGAAAGAAAAACTAAATCCAGCTATGAACAAAACACTGCAAATAATTTCTATCCTCATTTCTGTTGGCTATCTGAATCAGTTACATTCTTCTTCTACAGAAAACATAGAAGACATTCCTAATGCACTCCAATTAGTGAAGCTTATCTCTAGTTCTTATCCCGTTATGCCGGCAGATGCACTAATAACGCCAAAAAATTCATTACAGTAATAATGTGACTCCTCGTTAATGTATAGCATCCAATGGATCTATTAAGGACTCCTTATATTTCACATGGATTTGATGACCAAGAAAAAAGAACTAATAGCAATTGGAAAATAAACCCTTCTGTTGATTCTGCTTGAACGGGCTTAGGAACCAATTGGTATGGTTGATACTATGTAGATGTTATATTGCTGATTAGTGCTAGCTAGTGTAATTAATTAGCAGCTAGGAACAACTTGGGATTATAAACATGGCCGGATGGGAACTGGTAAGAGTGGAAACTGACAAAAAAATGGTTCAAGGACCGACCAACTTGTCATTTTCAACCGAATTAGGACATGGATACTATGTAGAGGTTACCAAAATTATGTTCCTTTAGATACATTCAAATACTTCTCTGCAGATTATTGGTTTGCCGATTTGAAATTTTGCATTTTGAATTTTGGGCATGTTTGAGAGTGATTGAAGTGATTAAAATCAGTTTTGCCATATTCAAAATCACTCCAATATTTGTCTTCTCTAAAAAAAGAGAATCACTCCAATATTTGGCTTTAATCATTCAAAATCAATTAAATGTTTAGTTTAATTTAACACTTTTCAAGCCGATCTTCATAGGGTCAAAATTAATTTTCAAGGATTAAAAGTATGTTTTGGGATGATTTTGAATATGATAAAAGTGATTTTTAACGATTTCAAAATCACTCTGAAACATGTTCTTATACAAGACAAAATGGATGAAGGCGAAATATGACATTTTTGTGAAGTTAGTAGTAGTATTTACATATTTCTAACTATATAATGTATTATAACAACTGTTTTGAAGAAAATCCAAAATGATAGAAACGTTTCCTTCAATAGATTGGAAAGCCGAGTTTTAAATAGTCTTAAGCGATCCCTGGAATCATCACTTGGTTAATGCTTTAGTCAAAAAGTTGACCAGACTAAGTATTTATATGGCAATGATTACGTAGCTTTTTAAATCAAATTTTTTATATTACTTTTGCTTATATAGTAGAACAAACAATTTGCTGACTTTAAGTTCACACTTCTTTTTTCCATTCTGTTATATGTTATTGACTTTTGAAGTAACTCGTCTCTCATGGAGGGTGTTCTGCCCCCTTGAACTTTGTACATCAATCTGAACTTTATAATGAATTGTTTGTTATTATGAACGAAATATCATTTGTTATAATATTATGTAGTCTAAAGAGAGATGTCTAGTGTAGGAAGTTCCCGCAATTTATTTTCATAACCTCTTTAGAACTTTTCAGTAACTTATTTGCCCTCTTTTTCCATTCATACGTGTGTATGTATATATATATATTTATATATTTCCTTTGATTGATGACTTCCTGTATCTGTATCAGTCTTGTTACGAATGGAATGGTTCATTGTGGATTAGTTCAGATGGTGATGCATTACTAGTTAAATATGCCCTTAAATTTCTTGATTTTACCAACAAAGTTTGTGGTTGGCTGTTTATAGAGCTTGGTATCTTTCAGTTTCCTAGTTCAAACATTTGTTATGCTAGCACAATATTTTCCTAATCAAATTCACGCCCCCTGATCTTCCTCGAAACTTGCTGATGATGGATTGGTCAATATTTGGAAAGTTGCAATGATTAGACTTTTTTGTATGACAAAAGGACTTCCCTTTCTTCCAATTCTATGTAATTATCCCTGTGGAAGTTACTACACATTATTTTCAATGGGCAAATCTGTATTTCCTTTCAAGGACTCTAGTATTGTAATGCGTTTCACTAACTTTTGAATTTGCATGTTTGAGAAAAGTTAGATTTTGATAACTTAACATGCACGTGTAAATTTCTTTGTTCAACTCCCTCCACACACTAGGGGCATTTCACATTTCAGGCTTTTGATAATTTGTTTACATCCCTATCTATGATTCCGGAACTCGTCAATTATTTGTTGTCTGAAGTGATGATGGAATTTGTTCATTTCAGCTCCTGTAGACATGCAAAGCATCAGAAATTCAATCCTGAAACACATGAGGATCAGAGGACCTAATACTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCGCCATTTGTGCACATCAAAATGTACAAGCACTGATGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTTGATAGAATCGACGCCTGTAAGGTAATTAGTCGAGGGCCAGCCTATCATCTCATCTTTGAACTTTTAAACTTTATTCAGGATTTCTGTGGATTCCCTCCTAATTATCGGATTCTATTAAATACAATACAATATATTTCTTAACATTTAATGTCGTGTTGAGCTGAGCAGGTTACTGAAACGGCTGATTTCCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAACAGGCAGATAAGCTTACGTGCTGTGCAGATGTAGCACGATACATAACTTCTCAAGTAGAGGAAAAGAAAGAGGAGAAACTCTGA

mRNA sequence

ATGTTTGATGAGTTCAAAAGAGAGATGGCAAAGGAGTTTGAAATGAAAGACATTGGTCTCATGAGTTACTATCTTGGGATTGAGGTCAAACAAGGTGAAGATGAGATTTTTATATCCCAAAAGGGCTATGCTAAAAAAGTGCTCAAAAAGTTCAATATGAATAATGCTAATATAGTTGGAACACCGATGGAATGTGGAGTCAAAATCACCAAGCAAGATGGAGGAGAGAAGGTAAATTCTACATATTTCAAAAGCTTGGTTGGAAGTTTGAGATATTTGACATGTAGAAGACCGGATATTCTTTATTTGGTTAGAATGATTAGTCGATTCATGGGGGAATCGACAACAACACATTACAAAATGGCAAAAAGGATACTTCGTTACATCAAAGGGACGATTGGGTATGGTCTTTCCTATGTCTCTTCTAGCAATTTTGATATTGTTGGTTATTGTGATAGTGATTGGAGTGGTGATTTGGATGATCGAAAGAGCACTACGGGTTTCAATTTCAAGTTGGGCGGACGCGAATATTTCCACCACCATAAAGTTAGTAGCTGCAACTCCTCTCCTGTAGACATGCAAAGCATCAGAAATTCAATCCTGAAACACATGAGGATCAGAGGACCTAATACTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCGCCATTTGTGCACATCAAAATGTACAAGCACTGATGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTTGATAGAATCGACGCCTGTAAGGTTACTGAAACGGCTGATTTCCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAACAGGCAGATAAGCTTACGTGCTGTGCAGATGTAGCACGATACATAACTTCTCAAGTAGAGGAAAAGAAAGAGGAGAAACTCTGA

Coding sequence (CDS)

ATGTTTGATGAGTTCAAAAGAGAGATGGCAAAGGAGTTTGAAATGAAAGACATTGGTCTCATGAGTTACTATCTTGGGATTGAGGTCAAACAAGGTGAAGATGAGATTTTTATATCCCAAAAGGGCTATGCTAAAAAAGTGCTCAAAAAGTTCAATATGAATAATGCTAATATAGTTGGAACACCGATGGAATGTGGAGTCAAAATCACCAAGCAAGATGGAGGAGAGAAGGTAAATTCTACATATTTCAAAAGCTTGGTTGGAAGTTTGAGATATTTGACATGTAGAAGACCGGATATTCTTTATTTGGTTAGAATGATTAGTCGATTCATGGGGGAATCGACAACAACACATTACAAAATGGCAAAAAGGATACTTCGTTACATCAAAGGGACGATTGGGTATGGTCTTTCCTATGTCTCTTCTAGCAATTTTGATATTGTTGGTTATTGTGATAGTGATTGGAGTGGTGATTTGGATGATCGAAAGAGCACTACGGGTTTCAATTTCAAGTTGGGCGGACGCGAATATTTCCACCACCATAAAGTTAGTAGCTGCAACTCCTCTCCTGTAGACATGCAAAGCATCAGAAATTCAATCCTGAAACACATGAGGATCAGAGGACCTAATACTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCGCCATTTGTGCACATCAAAATGTACAAGCACTGATGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTTGATAGAATCGACGCCTGTAAGGTTACTGAAACGGCTGATTTCCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAACAGGCAGATAAGCTTACGTGCTGTGCAGATGTAGCACGATACATAACTTCTCAAGTAGAGGAAAAGAAAGAGGAGAAACTCTGA

Protein sequence

MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLGGREYFHHHKVSSCNSSPVDMQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITSQVEEKKEEKL

Homology

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BLAST of ClCG01G010760 vs. NCBI nr
Match: XP_038889191.1 (uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida])

HSP 1 Score: 278.1 bits (710), Expect = 9.6e-71
Identity = 138/161 (85.71%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
           MFDEFKREMAK+FE+ DIGLMSYYLGIEVKQGED IFISQ+GY KKVLKKFNMN+AN  G
Sbjct: 36  MFDEFKREMAKDFEITDIGLMSYYLGIEVKQGEDGIFISQEGYVKKVLKKFNMNDANPFG 95

Query: 61  TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
           TPMECGVKITKQDGGEKVNSTYFKSLV SLRYLTC RPDI Y V +ISRFM E TTTH K
Sbjct: 96  TPMECGVKITKQDGGEKVNSTYFKSLVESLRYLTCTRPDIFYSVGIISRFMEEPTTTHCK 155

Query: 121 MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDD 162
           M K I RYIKGTIGYGL YVSSSNFDIVGYCDSDWS DLDD
Sbjct: 156 MTKMIFRYIKGTIGYGLFYVSSSNFDIVGYCDSDWSSDLDD 196

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: XP_038896505.1 (secreted RxLR effector protein 161-like [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-68
Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 15  MKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTPMECGVKITKQDG 74
           M +IGLMSYYLGIEVKQGED+IFISQ+GYAKKVLKKFNMN+AN VGTPMECGVKI KQDG
Sbjct: 1   MTNIGLMSYYLGIEVKQGEDDIFISQEGYAKKVLKKFNMNDANPVGTPMECGVKINKQDG 60

Query: 75  GEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMAKRILRYIKGTIG 134
           GEK+NSTYFKSLV SLRYLTC RPDILY V  ++RFM E T TH KMAKRILRYIKG IG
Sbjct: 61  GEKLNSTYFKSLVASLRYLTCTRPDILYSVGTLNRFMEEPTVTHCKMAKRILRYIKGMIG 120

Query: 135 YGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
           YGLSYVSSSNFDIVGYCDSDWS DLD+ KSTTGF F +G
Sbjct: 121 YGLSYVSSSNFDIVGYCDSDWSSDLDNLKSTTGFVFFIG 159

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: XP_038895793.1 (secreted RxLR effector protein 161-like [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 6.5e-67
Identity = 129/156 (82.69%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 15  MKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTPMECGVKITKQDG 74
           M DIGLMSY+LGI+VKQGED IFISQ+GYAK+VLKKFNMN+AN+VGTPMECGVKITKQDG
Sbjct: 1   MTDIGLMSYFLGIKVKQGEDGIFISQEGYAKEVLKKFNMNDANLVGTPMECGVKITKQDG 60

Query: 75  GEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMAKRILRYIKGTIG 134
           GEKVNSTYFKSLVGSLRYLTC R DILY V +IS+F+ E T TH KM KRIL Y+K TIG
Sbjct: 61  GEKVNSTYFKSLVGSLRYLTCTRSDILYSVGIISQFIEEPTATHCKMTKRILHYVKVTIG 120

Query: 135 YGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNF 171
           YGLSY+SSSNFDIVGYCDSDW+ DLDDRKSTTGF F
Sbjct: 121 YGLSYISSSNFDIVGYCDSDWNSDLDDRKSTTGFVF 156

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: XP_038888115.1 (uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida])

HSP 1 Score: 259.6 bits (662), Expect = 3.5e-65
Identity = 132/173 (76.30%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 1   MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
           MFDE K    +  + +DIGLMSYYLG   KQGE   F +Q+GYAK+VLKKFNMN+AN VG
Sbjct: 1   MFDESKERWQRSLKCRDIGLMSYYLGSRSKQGERWDFYTQEGYAKEVLKKFNMNDANPVG 60

Query: 61  TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
           TPMECGVKITKQDGGEKVNSTYFKSLV SLRYLTC R DILY V  ISRFM E TTT  K
Sbjct: 61  TPMECGVKITKQDGGEKVNSTYFKSLVESLRYLTCTRSDILYSVGSISRFMEEPTTTQCK 120

Query: 121 MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
           MAKRI RYIKGTIGY LSYVSSSNFDIVGYCDSDW+ DLDDRKS TGF F +G
Sbjct: 121 MAKRIFRYIKGTIGYDLSYVSSSNFDIVGYCDSDWNSDLDDRKSITGFVFFIG 173

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: RZB91916.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja])

HSP 1 Score: 250.0 bits (637), Expect = 2.8e-62
Identity = 120/173 (69.36%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 1    MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
            MF+EFK++M+ EFEM D+GLM+YYLGIEVKQ +  IFI+Q+GYAK+VLKKF M++AN VG
Sbjct: 950  MFEEFKKDMSNEFEMTDMGLMAYYLGIEVKQEDKGIFITQEGYAKEVLKKFKMDDANPVG 1009

Query: 61   TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
            TPMECG K++K + GE V+ T +KSLVGSLRYLTC RPDILY V ++SR+M   TTTH+K
Sbjct: 1010 TPMECGSKLSKHEKGENVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHFK 1069

Query: 121  MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
             AKRILRYIKGT  +GL Y SS N++IVGY DSDWSGDLDDRKSTTGF F +G
Sbjct: 1070 AAKRILRYIKGTTNFGLHYYSSDNYNIVGYSDSDWSGDLDDRKSTTGFVFFMG 1122

[Close]

BLAST of ClCG01G010760 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 136.0 bits (341), Expect = 7.7e-31
Identity = 69/173 (39.88%), Postives = 108/173 (62.43%), Query Frame = 0


Query: 3    DEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTP 62
            + FKR + ++F M D+  + +++GI ++  ED+I++SQ  Y KK+L KFNM N N V TP
Sbjct: 1102 NNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTP 1161

Query: 63   MECGVKITKQDGGEKVNSTYFKSLVGSLRY-LTCRRPDILYLVRMISRFMGESTTTHYKM 122
            +   +     +  E  N T  +SL+G L Y + C RPD+   V ++SR+  ++ +  ++ 
Sbjct: 1162 LPSKINYELLNSDEDCN-TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQN 1221

Query: 123  AKRILRYIKGTIGYGLSYVSSSNFD--IVGYCDSDWSGDLDDRKSTTGFNFKL 173
             KR+LRY+KGTI   L +  +  F+  I+GY DSDW+G   DRKSTTG+ FK+
Sbjct: 1222 LKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKM 1273

[Close]

BLAST of ClCG01G010760 vs. ExPASy Swiss-Prot
Match: Q9FGJ4 (Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.0e-28
Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 193 MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTS---TDEIVDRVIGLV 252
           M  IR+SIL+H+R+R     T LL ++EN  + +     TS+  +    D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 253 KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARY 312
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDE+ADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 313 ITSQVEEKKEE 321
           I S+   K  E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of ClCG01G010760 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.0e-27
Identity = 64/167 (38.32%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 8   EMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTPMECGV 67
           +++  F MKD+G + Y+LGI++K     +F+SQ  YA+++L    M +   + TP+   +
Sbjct: 26  QLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLP--L 85

Query: 68  KITKQDGGEKV-NSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMAKRIL 127
           K+       K  + + F+S+VG+L+YLT  RPDI Y V ++ + M E T   + + KR+L
Sbjct: 86  KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVL 145

Query: 128 RYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
           RY+KGTI +GL    +S  ++  +CDSDW+G    R+STTGF   LG
Sbjct: 146 RYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLG 190

[Close]

BLAST of ClCG01G010760 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 9    MAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTPMECGVK 68
            +++ F +KD   + Y+LGIE K+    + +SQ+ Y   +L + NM  A  V TPM    K
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 69   ITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMAKRILRY 128
            ++   G +  + T ++ +VGSL+YL   RPDI Y V  +S+FM   T  H +  KRILRY
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 129  IKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLGGREYFHHHKVS 185
            + GT  +G+     +   +  Y D+DW+GD DD  ST G+   LG      HH +S
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLG------HHPIS 1340

[Close]

BLAST of ClCG01G010760 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26
Identity = 62/176 (35.23%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 9    MAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTPMECGVK 68
            +++ F +K+   + Y+LGIE K+    + +SQ+ Y   +L + NM  A  V TPM    K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 69   ITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMAKRILRY 128
            +T   G +  + T ++ +VGSL+YL   RPD+ Y V  +S++M   T  H+   KR+LRY
Sbjct: 1214 LTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRY 1273

Query: 129  IKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLGGREYFHHHKVS 185
            + GT  +G+     +   +  Y D+DW+GD DD  ST G+   LG      HH +S
Sbjct: 1274 LAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLG------HHPIS 1323

[Close]

BLAST of ClCG01G010760 vs. ExPASy TrEMBL
Match: A0A445J0L7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Glycine soja OX=3848 GN=D0Y65_024077 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62
Identity = 120/173 (69.36%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 1    MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
            MF+EFK++M+ EFEM D+GLM+YYLGIEVKQ +  IFI+Q+GYAK+VLKKF M++AN VG
Sbjct: 950  MFEEFKKDMSNEFEMTDMGLMAYYLGIEVKQEDKGIFITQEGYAKEVLKKFKMDDANPVG 1009

Query: 61   TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
            TPMECG K++K + GE V+ T +KSLVGSLRYLTC RPDILY V ++SR+M   TTTH+K
Sbjct: 1010 TPMECGSKLSKHEKGENVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHFK 1069

Query: 121  MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
             AKRILRYIKGT  +GL Y SS N++IVGY DSDWSGDLDDRKSTTGF F +G
Sbjct: 1070 AAKRILRYIKGTTNFGLHYYSSDNYNIVGYSDSDWSGDLDDRKSTTGFVFFMG 1122

[Close]

BLAST of ClCG01G010760 vs. ExPASy TrEMBL
Match: Q9C536 (Copia-type polyprotein, putative OS=Arabidopsis thaliana OX=3702 GN=T18I24.5 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 117/173 (67.63%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1    MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
            MF+EFK+EM KEFEM DIGLMSYYLGIEVKQ ++ IFI+Q+GYAK+VLKKF M+++N V 
Sbjct: 1012 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVC 1071

Query: 61   TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
            TPMECG+K++K++ GE V+ T FKSLVGSLRYLTC RPDILY V ++SR+M   TTTH+K
Sbjct: 1072 TPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFK 1131

Query: 121  MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
             AKRILRYIKGT+ +GL Y ++S++ +VGY DSDW GD+DDRKST+GF F +G
Sbjct: 1132 AAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIG 1184

[Close]

BLAST of ClCG01G010760 vs. ExPASy TrEMBL
Match: Q9C739 (Copia-type polyprotein, putative OS=Arabidopsis thaliana OX=3702 GN=F11I4_21 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 117/173 (67.63%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1    MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
            MF+EFK+EM KEFEM DIGLMSYYLGIEVKQ ++ IFI+Q+GYAK+VLKKF M+++N V 
Sbjct: 1044 MFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVC 1103

Query: 61   TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
            TPMECG+K++K++ GE V+ T FKSLVGSLRYLTC RPDILY V ++SR+M   TTTH+K
Sbjct: 1104 TPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFK 1163

Query: 121  MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
             AKRILRYIKGT+ +GL Y ++S++ +VGY DSDW GD+DDRKST+GF F +G
Sbjct: 1164 AAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIG 1216

[Close]

BLAST of ClCG01G010760 vs. ExPASy TrEMBL
Match: A0A0L9TAH8 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan437s000300 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61
Identity = 116/173 (67.05%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
           MF+EFK++M  EFEM D+GLM+YYLGIEVKQG   IFI+Q+ YAK VLKKF M++AN+VG
Sbjct: 237 MFEEFKKDMTMEFEMTDMGLMAYYLGIEVKQGNKGIFITQESYAKDVLKKFKMDDANLVG 296

Query: 61  TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
           TPMECG+K++K + GEKV+ T +KSLVGSLRYLTC RPDILY V ++SR+M   TTTH+K
Sbjct: 297 TPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHFK 356

Query: 121 MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
            AKRILRYI+GT  YGL Y  S+++ +VGY DSDWSGD+DDRKST+GF F +G
Sbjct: 357 SAKRILRYIQGTTSYGLYYSISNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMG 409

[Close]

BLAST of ClCG01G010760 vs. ExPASy TrEMBL
Match: A0A314LAQ6 (Retrovirus-related pol polyprotein from transposon tnt 1-94 OS=Nicotiana attenuata OX=49451 GN=POLX_81 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 121/182 (66.48%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 1   MFDEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVG 60
           MF+EFK  MA+EFEM DIGLMSYYLGI+V+Q +D IFISQ  YAK++LKKF M+N N V 
Sbjct: 101 MFEEFKEAMAREFEMTDIGLMSYYLGIQVQQRKDGIFISQGEYAKEILKKFEMDNCNPVS 160

Query: 61  TPMECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYK 120
           TP+ECGVKI+K   GE VN T+FKSLVGSLRYLTC RPDILY V ++SRFM   TT+H K
Sbjct: 161 TPVECGVKISKHGDGENVNPTFFKSLVGSLRYLTCTRPDILYGVELVSRFMEAPTTSHLK 220

Query: 121 MAKRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLGGREYFHH 180
           +AKRILRYIK T+ YG+ Y SS +   VGYCDSDW+GD+DDRKSTTGF F LG   +  +
Sbjct: 221 VAKRILRYIKDTLDYGILYSSSKDSKFVGYCDSDWAGDIDDRKSTTGFVFFLGNSAFTWN 280

Query: 181 HK 183
            K
Sbjct: 281 SK 282

[Close]

BLAST of ClCG01G010760 vs. TAIR 10
Match: AT5G47630.1 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 125.9 bits (315), Expect = 5.7e-29
Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 193 MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTS---TDEIVDRVIGLV 252
           M  IR+SIL+H+R+R     T LL ++EN  + +     TS+  +    D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 253 KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARY 312
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDE+ADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 313 ITSQVEEKKEE 321
           I S+   K  E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of ClCG01G010760 vs. TAIR 10
Match: AT5G47630.2 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 125.9 bits (315), Expect = 5.7e-29
Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 193 MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTS---TDEIVDRVIGLV 252
           M  IR+SIL+H+R+R     T LL ++EN  + +     TS+  +    D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 253 KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARY 312
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDE+ADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 313 ITSQVEEKKEE 321
           I S+   K  E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of ClCG01G010760 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-28
Identity = 64/167 (38.32%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 8   EMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTPMECGV 67
           +++  F MKD+G + Y+LGI++K     +F+SQ  YA+++L    M +   + TP+   +
Sbjct: 26  QLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLP--L 85

Query: 68  KITKQDGGEKV-NSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMAKRIL 127
           K+       K  + + F+S+VG+L+YLT  RPDI Y V ++ + M E T   + + KR+L
Sbjct: 86  KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVL 145

Query: 128 RYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
           RY+KGTI +GL    +S  ++  +CDSDW+G    R+STTGF   LG
Sbjct: 146 RYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLG 190

[Close]

BLAST of ClCG01G010760 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 102.8 bits (255), Expect = 5.2e-22
Identity = 54/171 (31.58%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 3   DEFKREMAKEFEMKDIGLMSYYLGIEVKQGEDEIFISQKGYAKKVLKKFNMNNANIVGTP 62
           DE K ++   F+++D+G + Y+LG+E+ +    I I Q+ YA  +L +  +        P
Sbjct: 298 DELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVP 357

Query: 63  MECGVKITKQDGGEKVNSTYFKSLVGSLRYLTCRRPDILYLVRMISRFMGESTTTHYKMA 122
           M+  V  +   GG+ V++  ++ L+G L YL   R DI + V  +S+F       H +  
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

Query: 123 KRILRYIKGTIGYGLSYVSSSNFDIVGYCDSDWSGDLDDRKSTTGFNFKLG 174
            +IL YIKGT+G GL Y S +   +  + D+ +    D R+ST G+   LG
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468

[Close]

BLAST of ClCG01G010760 vs. TAIR 10
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1 )

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-17
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 195 SIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKFDR 254
           ++RN+IL+H+R+  P  T  L       +  +          S + +VDRV+ +VK F +
Sbjct: 2   ALRNAILRHLRV--PVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPK 61

Query: 255 IDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYI 311
           +D  KVT    FQ DL LDSLD VE+VMA E+EF +EIPD++ADK+  C+    Y+
Sbjct: 62  VDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYV 115

The following BLAST results are available for this feature:

BLAST of ClCG01G010760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889191.1	9.6e-71	85.71	uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]	[more]
XP_038896505.1	2.6e-68	83.65	secreted RxLR effector protein 161-like [Benincasa hispida]	[more]
XP_038895793.1	6.5e-67	82.69	secreted RxLR effector protein 161-like [Benincasa hispida]	[more]
XP_038888115.1	3.5e-65	76.30	uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]	[more]
RZB91916.1	2.8e-62	69.36	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]	[more]

BLAST of ClCG01G010760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04146	7.7e-31	39.88	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9FGJ4	8.0e-28	54.96	Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 ...	[more]
P92519	3.0e-27	38.32	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	7.5e-26	36.93	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	7.5e-26	35.23	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of ClCG01G010760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A445J0L7	1.4e-62	69.36	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Glycine soja OX=3...	[more]
Q9C536	1.1e-61	67.63	Copia-type polyprotein, putative OS=Arabidopsis thaliana OX=3702 GN=T18I24.5 PE=...	[more]
Q9C739	1.1e-61	67.63	Copia-type polyprotein, putative OS=Arabidopsis thaliana OX=3702 GN=F11I4_21 PE=...	[more]
A0A0L9TAH8	2.0e-61	67.05	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Phaseolus angu...	[more]
A0A314LAQ6	2.6e-61	66.48	Retrovirus-related pol polyprotein from transposon tnt 1-94 OS=Nicotiana attenua...	[more]

BLAST of ClCG01G010760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47630.1	5.7e-29	54.96	mitochondrial acyl carrier protein 3	[more]
AT5G47630.2	5.7e-29	54.96	mitochondrial acyl carrier protein 3	[more]
ATMG00810.1	2.2e-28	38.32	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	5.2e-22	31.58	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
AT2G44620.1	1.3e-17	40.52	mitochondrial acyl carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 244..310 e-value: 3.1E-9 score: 37.0
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 239..314 score: 17.933876
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 239..313 e-value: 6.8E-22 score: 75.1
IPR003231	Acyl carrier protein (ACP)	PANTHER	PTHR20863	ACYL CARRIER PROTEIN	coord: 190..319
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 240..314 score: 16.343874
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 220..321 e-value: 2.7E-24 score: 87.2
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 237..316
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 2..64 e-value: 6.1E-15 score: 55.5
None	No IPR available	PANTHER	PTHR20863:SF60	ACYL CARRIER PROTEIN 3, MITOCHONDRIAL	coord: 190..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010760.2	ClCG01G010760.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding