ClCG01G010710 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G010710
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-type domain-containing protein
Location	CG_Chr01: 16702443 .. 16703201 (-)
RNA-Seq Expression	ClCG01G010710
Synteny	ClCG01G010710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATCTATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAATGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAATGCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATACTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTTGGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAATCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAATGGTATAACTTCATGA

mRNA sequence

ATGAACATCTATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAATGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAATGCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATACTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTTGGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAATCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAATGGTATAACTTCATGA

Coding sequence (CDS)

ATGAACATCTATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAATGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAATGCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATACTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTTGGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAATCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAATGGTATAACTTCATGA

Protein sequence

MNIYFADVLSVAYRNSSSVRMWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS

Homology

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: XP_008465708.1 (PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >XP_008465709.1 PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >XP_008465710.1 PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >KAA0040509.1 zf-RING_LisH domain-containing protein [Cucumis melo var. makuwa] >TYK23453.1 zf-RING_LisH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 414.8 bits (1065), Expect = 5.2e-112
Identity = 212/232 (91.38%), Postives = 219/232 (94.40%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIRSKKNS   K VFWECSDD+VCSE+S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLV 200
           LLWMVESFNGNEGKLDHSFN DNQ VFSLPS T TSERRRLFFYNHLDC+ HL+FKFLL 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLPSGTVTSERRRLFFYNHLDCVIHLVFKFLLT 180

Query: 201 VIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS 253
           VIF+LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL+KLMN ITS
Sbjct: 181 VIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALDKLMNDITS 232

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: XP_038890517.1 (uncharacterized protein LOC120080047 [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 7.4e-111
Identity = 213/236 (90.25%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIR KKNS   K VFWECSDD+VCSE+S DEELECPICWESFN+VENVPY
Sbjct: 1   MWKLASNAIAGIRPKKNSTAPKQVFWECSDDEVCSEASRDEELECPICWESFNLVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIF+SCPWCHQLSLRVVY+GNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFLSCPWCHQLSLRVVYRGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDT----SERRRLFFYNHLDCLFHLIFK 200
           LLWMVESFNGNEGK DHSFN DNQPVFSLPS+TDT    SERRRLFFYNHLD + HLIFK
Sbjct: 121 LLWMVESFNGNEGKHDHSFNGDNQPVFSLPSETDTDTDISERRRLFFYNHLDFVVHLIFK 180

Query: 201 FLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS 253
           FLLVVIFLLIVVFVIPGSALILLLYLLITLL ALPSLLIFYLALHALEKLMN ITS
Sbjct: 181 FLLVVIFLLIVVFVIPGSALILLLYLLITLLLALPSLLIFYLALHALEKLMNDITS 236

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: XP_011655300.2 (uncharacterized protein LOC101218619 [Cucumis sativus] >XP_031741070.1 uncharacterized protein LOC101218619 [Cucumis sativus] >KAE8648500.1 hypothetical protein Csa_008920 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 2.4e-109
Identity = 211/236 (89.41%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIRSKKNS   K VFWECSDD+ CSE+S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVSKQVFWECSDDEACSEASRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTD----TSERRRLFFYNHLDCLFHLIFK 200
           LLWMVESFNGNEGKLDHSFN DN P+FSLPS T     TSERRRLFFYNHLD + HLIFK
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNHPLFSLPSGTGTGTVTSERRRLFFYNHLDFVVHLIFK 180

Query: 201 FLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS 253
           FLL+VIF+LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLA HALEKLMN ITS
Sbjct: 181 FLLLVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLAFHALEKLMNDITS 236

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: KAG6599045.1 (hypothetical protein SDJN03_08823, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.7 bits (997), Expect = 4.0e-104
Identity = 204/249 (81.93%), Postives = 212/249 (85.14%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFF 200
           LLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+                RRRLF 
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRHGIERRRRLFS 180

Query: 201 YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 253
           Y HLDC+ HLIFKFLL VIF+LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: KAG6599030.1 (hypothetical protein SDJN03_08808, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-103
Identity = 203/249 (81.53%), Postives = 212/249 (85.14%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFF 200
           LLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+                RRRLF 
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFLDGRVSRHGIERRRRLFS 180

Query: 201 YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 253
           Y HLDC+ HLIFKFLL VIF+LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of ClCG01G010710 vs. ExPASy Swiss-Prot
Match: Q8K0W3 (RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 0


Query: 61  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH 120
           E LECP C  ++N+ +  P VL C HS+C+ C+  L  S  K          FISCP CH
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FISCPTCH 195

Query: 121 Q 122
           +
Sbjct: 203 R 195

[Close]

BLAST of ClCG01G010710 vs. ExPASy Swiss-Prot
Match: Q9H0X6 (RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 26/67 (38.81%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 55  SESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFI 114
           S ++  E LECP C  S+N+ +  P VL C HS+C+ C+  L  S  K          FI
Sbjct: 133 SSAAAGEPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FI 191

Query: 115 SCPWCHQ 122
           SCP C +
Sbjct: 193 SCPTCRR 191

[Close]

BLAST of ClCG01G010710 vs. ExPASy Swiss-Prot
Match: Q13049 (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 61  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH 120
           E LECPIC ESF   +  P +L CGH++C+ C+  L  S +            + CP+C 
Sbjct: 16  EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 68

Query: 121 QLS 124
           +++
Sbjct: 76  KIT 68

[Close]

BLAST of ClCG01G010710 vs. ExPASy Swiss-Prot
Match: Q8CH72 (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 61  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCH 120
           E LECPIC ESF   +  P +L CGH++C+ C+  L  S +            + CP+C 
Sbjct: 17  EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 69

Query: 121 QLS 124
           +++
Sbjct: 77  KIT 69

[Close]

BLAST of ClCG01G010710 vs. ExPASy Swiss-Prot
Match: Q96D59 (E3 ubiquitin-protein ligase RNF183 OS=Homo sapiens OX=9606 GN=RNF183 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-04
Identity = 26/68 (38.24%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 55  SESSGDE-ELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIF 114
           +E  G E E ECP+CW  FN   + P +L C HS C  C+  L  S++  A R+      
Sbjct: 2   AEQQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL--SLVTPARRR------ 61

Query: 115 ISCPWCHQ 122
           + CP C Q
Sbjct: 62  LLCPLCRQ 61

[Close]

BLAST of ClCG01G010710 vs. ExPASy TrEMBL
Match: A0A1S3CPH8 (uncharacterized protein LOC103503329 OS=Cucumis melo OX=3656 GN=LOC103503329 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.5e-112
Identity = 212/232 (91.38%), Postives = 219/232 (94.40%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIRSKKNS   K VFWECSDD+VCSE+S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLV 200
           LLWMVESFNGNEGKLDHSFN DNQ VFSLPS T TSERRRLFFYNHLDC+ HL+FKFLL 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLPSGTVTSERRRLFFYNHLDCVIHLVFKFLLT 180

Query: 201 VIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS 253
           VIF+LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL+KLMN ITS
Sbjct: 181 VIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALDKLMNDITS 232

[Close]

BLAST of ClCG01G010710 vs. ExPASy TrEMBL
Match: A0A5A7TGX0 (Zf-RING_LisH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00120 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.5e-112
Identity = 212/232 (91.38%), Postives = 219/232 (94.40%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIRSKKNS   K VFWECSDD+VCSE+S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLV 200
           LLWMVESFNGNEGKLDHSFN DNQ VFSLPS T TSERRRLFFYNHLDC+ HL+FKFLL 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLPSGTVTSERRRLFFYNHLDCVIHLVFKFLLT 180

Query: 201 VIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS 253
           VIF+LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL+KLMN ITS
Sbjct: 181 VIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALDKLMNDITS 232

[Close]

BLAST of ClCG01G010710 vs. ExPASy TrEMBL
Match: A0A6J1KAL8 (uncharacterized protein LOC111493743 OS=Cucurbita maxima OX=3661 GN=LOC111493743 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.6e-104
Identity = 206/249 (82.73%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSER--------------RR--LFF 200
           LLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+R              RR  LF 
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVNRHGIERRPWLFS 180

Query: 201 YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 253
           Y HLDCL HLIFKFLLVVIF+LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCLIHLIFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of ClCG01G010710 vs. ExPASy TrEMBL
Match: A0A6J1G3L5 (uncharacterized protein LOC111450453 OS=Cucurbita moschata OX=3662 GN=LOC111450453 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.6e-104
Identity = 203/249 (81.53%), Postives = 212/249 (85.14%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNA AGIRSK NSA  K  FWECSDD+VCSE S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSL-PSDTDTSE----------------RRRLFF 200
           LLWMVES NGNEGKLDH FN DNQPVFSL PSD D S+                RRRLF 
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRHGIERRRRLFS 180

Query: 201 YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 253
           Y HLDC+ HLIFKFLL VIF+LIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of ClCG01G010710 vs. ExPASy TrEMBL
Match: A0A6J1D940 (uncharacterized protein LOC111018502 OS=Momordica charantia OX=3673 GN=LOC111018502 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.7e-100
Identity = 196/248 (79.03%), Postives = 211/248 (85.08%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIR +KNS   K VFWECSDD+VCSE+S DE LECPICWESFNIVEN+PY
Sbjct: 1   MWKLASNAIAGIRLRKNSVVSKQVFWECSDDEVCSEASRDEGLECPICWESFNIVENIPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQGSVLK+ATRQIR+PI ISCPWCHQLSLR+VYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQGSVLKVATRQIRVPICISCPWCHQLSLRLVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDT----------------SERRRLFFY 200
           LLWMVESFN +EGKLDHSFN DNQPVF LPSDT+T                  RR LF Y
Sbjct: 121 LLWMVESFNDDEGKLDHSFNGDNQPVFPLPSDTETVSSERLDSHVSRHGIGRRRRWLFVY 180

Query: 201 NHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALE 253
            +LD L HLI KFLLVVIFLLIVVFVIPGSA+ILLLYLLIT LFALPSLL+FYLALHALE
Sbjct: 181 KYLDWLIHLISKFLLVVIFLLIVVFVIPGSAVILLLYLLITFLFALPSLLVFYLALHALE 240

[Close]

BLAST of ClCG01G010710 vs. TAIR 10
Match: AT1G69330.1 (RING/U-box superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-59
Identity = 135/269 (50.19%), Postives = 165/269 (61.34%), Query Frame = 0


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASN I  +  KK+  +      +CSDD+V + S  +E LECPICWESFNIVENVPY
Sbjct: 1   MWGFASNVIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LC+NCV GLQ +VL+L+++ IRIP F+SCPWC  LS R+VYKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNFF 120

Query: 141 LLWMVESFNG---------NEGKL------------------DHSFNED--------NQP 200
           LLWMVES NG         + G L                  +HS N +        NQ 
Sbjct: 121 LLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLRNQS 180

Query: 201 VFSLP-SDTDTSERRRLF-FYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLL 253
              LP  D      R+LF F+  LD       KF  V+IFLLIV F IPGS +IL LY L
Sbjct: 181 TDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFL 240

[Close]

BLAST of ClCG01G010710 vs. TAIR 10
Match: AT3G29270.1 (RING/U-box superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 1.4e-54
Identity = 129/263 (49.05%), Postives = 165/263 (62.74%), Query Frame = 0


Query: 20  RMWKLASNAIAGIRSKKNSAECKPV--FWECSDDDVCSESSGDEELECPICWESFNIVEN 79
           RMW LAS+ + G    KN    +PV    ECSDDDV S  S DE LECPICWESFNIVEN
Sbjct: 8   RMWNLASSYLTGNIGPKNDIR-RPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVEN 67

Query: 80  VPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSK 139
           VPYVLWCGH++CKNC+LGLQ +++KL T  +++P+FISCPWC+ LS R+V++G L+FP K
Sbjct: 68  VPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHK 127

Query: 140 NFFLLWMVESFNG----------NEGKLD----------HSFNEDNQPVFS-------LP 199
           N+F+LWMVE  NG           +G  D          H+ +  +QP  S       +P
Sbjct: 128 NYFVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSPCLHNRHHRSQPEPSRSVNDHRIP 187

Query: 200 SDT-DTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFA 253
            D   TS R+ L F+        L  KF LVVIFLLI+++ IP SA IL +Y+L+TLL A
Sbjct: 188 RDNIQTSLRKSLVFF------VQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLLA 247

[Close]

BLAST of ClCG01G010710 vs. TAIR 10
Match: AT3G29270.2 (RING/U-box superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 1.4e-54
Identity = 129/263 (49.05%), Postives = 165/263 (62.74%), Query Frame = 0


Query: 20  RMWKLASNAIAGIRSKKNSAECKPV--FWECSDDDVCSESSGDEELECPICWESFNIVEN 79
           RMW LAS+ + G    KN    +PV    ECSDDDV S  S DE LECPICWESFNIVEN
Sbjct: 8   RMWNLASSYLTGNIGPKNDIR-RPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVEN 67

Query: 80  VPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSK 139
           VPYVLWCGH++CKNC+LGLQ +++KL T  +++P+FISCPWC+ LS R+V++G L+FP K
Sbjct: 68  VPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHK 127

Query: 140 NFFLLWMVESFNG----------NEGKLD----------HSFNEDNQPVFS-------LP 199
           N+F+LWMVE  NG           +G  D          H+ +  +QP  S       +P
Sbjct: 128 NYFVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSPCLHNRHHRSQPEPSRSVNDHRIP 187

Query: 200 SDT-DTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFA 253
            D   TS R+ L F+        L  KF LVVIFLLI+++ IP SA IL +Y+L+TLL A
Sbjct: 188 RDNIQTSLRKSLVFF------VQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLLA 247

[Close]

BLAST of ClCG01G010710 vs. TAIR 10
Match: AT1G74370.1 (RING/U-box superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-40
Identity = 108/265 (40.75%), Postives = 148/265 (55.85%), Query Frame = 0


Query: 21  MWKLASNAI-AGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVP 80
           MW LAS +I  G  SK   A  KP            +++ +E+LECPICWESFN+VENVP
Sbjct: 1   MWNLASKSIREGFISKGEEAATKPRRATLDRSGDGRKTTKEEKLECPICWESFNVVENVP 60

Query: 81  YVLWCGHSLCKNCVLGLQGS-VLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKN 140
           YVLWCGH++CK C+LGLQ + V+K +    ++P F++CPWC+ LSLR+V  G ++FPSKN
Sbjct: 61  YVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPSKN 120

Query: 141 FFLLWMVESFNGNEGKLDHSFNEDNQPVFS---------------LPSDTDTSERR---- 200
           F+LLWMVES NG+  +       DN+ V S                  D    + R    
Sbjct: 121 FYLLWMVESMNGSRSEAP----SDNKRVASGQRDLRNRCDGVSNTALGDEGLLDNRSWWN 180

Query: 201 ---RLFF---------YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLL 253
              R FF            +  + HL+ KF LVVIFLL+ ++ IP SA +L +Y  +T  
Sbjct: 181 GVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFA 240

[Close]

BLAST of ClCG01G010710 vs. TAIR 10
Match: AT1G21651.1 (zinc ion binding )

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-05
Identity = 22/59 (37.29%), Postives = 30/59 (50.85%), Query Frame = 0


Query: 61  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWC 120
           EE ECP+C +S++    VP VL CGH+ C+ C+  L            + P  I CP C
Sbjct: 2   EEPECPVCLQSYDGESTVPRVLACGHTACEECLTNLPK----------KFPDTIRCPAC 50

The following BLAST results are available for this feature:

BLAST of ClCG01G010710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465708.1	5.2e-112	91.38	PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >XP_008465709.1 P...	[more]
XP_038890517.1	7.4e-111	90.25	uncharacterized protein LOC120080047 [Benincasa hispida]	[more]
XP_011655300.2	2.4e-109	89.41	uncharacterized protein LOC101218619 [Cucumis sativus] >XP_031741070.1 uncharact...	[more]
KAG6599045.1	4.0e-104	81.93	hypothetical protein SDJN03_08823, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6599030.1	1.2e-103	81.53	hypothetical protein SDJN03_08808, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG01G010710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8K0W3	1.2e-05	40.98	RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2	[more]
Q9H0X6	1.5e-05	38.81	RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2	[more]
Q13049	1.7e-04	34.92	E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2	[more]
Q8CH72	1.7e-04	34.92	E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2	[more]
Q96D59	3.7e-04	38.24	E3 ubiquitin-protein ligase RNF183 OS=Homo sapiens OX=9606 GN=RNF183 PE=1 SV=2	[more]

BLAST of ClCG01G010710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPH8	2.5e-112	91.38	uncharacterized protein LOC103503329 OS=Cucumis melo OX=3656 GN=LOC103503329 PE=...	[more]
A0A5A7TGX0	2.5e-112	91.38	Zf-RING_LisH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1KAL8	5.6e-104	82.73	uncharacterized protein LOC111493743 OS=Cucurbita maxima OX=3661 GN=LOC111493743...	[more]
A0A6J1G3L5	5.6e-104	81.53	uncharacterized protein LOC111450453 OS=Cucurbita moschata OX=3662 GN=LOC1114504...	[more]
A0A6J1D940	3.7e-100	79.03	uncharacterized protein LOC111018502 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of ClCG01G010710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69330.1	2.4e-59	50.19	RING/U-box superfamily protein	[more]
AT3G29270.1	1.4e-54	49.05	RING/U-box superfamily protein	[more]
AT3G29270.2	1.4e-54	49.05	RING/U-box superfamily protein	[more]
AT1G74370.1	4.3e-40	40.75	RING/U-box superfamily protein	[more]
AT1G21651.1	3.4e-05	37.29	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 53..157 e-value: 8.5E-13 score: 49.6
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 65..94 e-value: 8.1E-8 score: 32.2
None	No IPR available	PANTHER	PTHR46616:SF1	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 173..252
None	No IPR available	PANTHER	PTHR46616	UBIQUITIN-PROTEIN LIGASE	coord: 173..252
None	No IPR available	PANTHER	PTHR46616	UBIQUITIN-PROTEIN LIGASE	coord: 21..169
None	No IPR available	PANTHER	PTHR46616:SF1	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 21..169
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 60..122
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 84..93
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 65..120 score: 9.937009

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010710.1	ClCG01G010710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity