ClCG01G010400 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G010400
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr01: 15697678 .. 15698754 (-)
RNA-Seq ExpressionClCG01G010400
SyntenyClCG01G010400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGACCTATCAAGAGACTCGAGAAGAGTTGGGTGTCCAGACCAAGGACTCTAGACTTGATGCCGGTGTTAGGGAGCAGGTTCAGGTTGGTGTTACATCAGAGTTGGCCAACATGAAGTTTGAACTGGCTAGCATGAAGACCGAGTTGGTTGGCAAGAAGTTCGAGTTTGCAGGGTTGACGTCTAAGTTTTCTGGTGTGAAGCTGGACATCGTTGTGATGTTGGGATACCTAAAGCAACTCGTGAAGGTATTAGTTGTTCAAAATTTAAGTTTATCTCATATATTTTCATGTATCCTAATGTTAAACATGTAGGTTTATGGAACAGGTTATTCATCCAATTGTAGGGCAAACATGTTGACGATCAAGCCCTAAATGGTAGTGGAGATGAGAATGGTGATGACAGCAAACCTAGGTCGTCGACTGGTTTTGGTGGCCCATTGGGATCTATAGGGCGGGACAGTGAGAACTGGCAGGATCGAGAAGCAGTTGCTTTTGATGCACTTATTCACGAGGAGGATGCAGACCCTTCGAAGCATTCACCGAGCATTGAAGAAGATGACTTGGCAAGTATAAATTTGATAATATTCAGATTAACTACATATAGTCCTGTTCTAACTTGCAGGTTGATGTTTATGTTATTGACAACGATGAGTAGGATGTAGACACAACAACGAATCAAGAAGAATAGTCTCCGATTTGATTAAGCAAAGCCACATCCAAGTTGGATGAGGAGGATGTAGGACACACCAGATTGAGACCTCCATGGTAACATTTACTGCGATTTTGTTTGCCATTGCACAAATTGTTTATATTTTGATTTATTTGTCCTTGTAAACTTCTTAATGCAATGTAGGTAAAAAAGACGATCACTCCTGCTATGGCCAAAATATAGAAGCAAGCCAGTTCAGAGATATGGAGGTTAGAGGCAACCTGGGAAGCCAACCGTATTGCTGTGAAGCAGGAGATCAAGAACTTGACACTCGATCCATTCCCTACGGTGCTATAAGGTATTTTAGTCCTAGACGAATTCGAACTAGTGAATTGTCGAAAACGGTGAGTACCCTGGACACTTCGTAG

mRNA sequence

GGGACCTATCAAGAGACTCGAGAAGAGTTGGGTGTCCAGACCAAGGACTCTAGACTTGATGCCGGTGTTAGGGAGCAGGTTCAGGTTGGTGTTACATCAGAGTTGGCCAACATGAAGTTTGAACTGGCTAGCATGAAGACCGAGTTGGTTGGCAAGAAGTTCGAGTTTGCAGGGTTGACGTCTAAGTTTTCTGGTGTGAAGCTGGACATCGTTGTGATGTTGGGATACCTAAAGCAACTCGTGAAGGGCAAACATGTTGACGATCAAGCCCTAAATGGTAGTGGAGATGAGAATGGTGATGACAGCAAACCTAGGTCGTCGACTGGTTTTGGTGGCCCATTGGGATCTATAGGGCGGGACAGTGAGAACTGGCAGGATCGAGAAGCAGTTGCTTTTGATGCACTTATTCACGAGGAGGATGCAGACCCTTCGAAGCATTCACCGAGCATTGAAGAAGATGACTTGGCAAGTAAAAAAGACGATCACTCCTGCTATGGCCAAAATATAGAAGCAAGCCAGTTCAGAGATATGGAGGTTAGAGGCAACCTGGGAAGCCAACCGTATTGCTGTGAAGCAGGAGATCAAGAACTTGACACTCGATCCATTCCCTACGGTGCTATAAGGTATTTTAGTCCTAGACGAATTCGAACTAGTGAATTGTCGAAAACGGTGAGTACCCTGGACACTTCGTAG

Coding sequence (CDS)

GGGACCTATCAAGAGACTCGAGAAGAGTTGGGTGTCCAGACCAAGGACTCTAGACTTGATGCCGGTGTTAGGGAGCAGGTTCAGGTTGGTGTTACATCAGAGTTGGCCAACATGAAGTTTGAACTGGCTAGCATGAAGACCGAGTTGGTTGGCAAGAAGTTCGAGTTTGCAGGGTTGACGTCTAAGTTTTCTGGTGTGAAGCTGGACATCGTTGTGATGTTGGGATACCTAAAGCAACTCGTGAAGGGCAAACATGTTGACGATCAAGCCCTAAATGGTAGTGGAGATGAGAATGGTGATGACAGCAAACCTAGGTCGTCGACTGGTTTTGGTGGCCCATTGGGATCTATAGGGCGGGACAGTGAGAACTGGCAGGATCGAGAAGCAGTTGCTTTTGATGCACTTATTCACGAGGAGGATGCAGACCCTTCGAAGCATTCACCGAGCATTGAAGAAGATGACTTGGCAAGTAAAAAAGACGATCACTCCTGCTATGGCCAAAATATAGAAGCAAGCCAGTTCAGAGATATGGAGGTTAGAGGCAACCTGGGAAGCCAACCGTATTGCTGTGAAGCAGGAGATCAAGAACTTGACACTCGATCCATTCCCTACGGTGCTATAAGGTATTTTAGTCCTAGACGAATTCGAACTAGTGAATTGTCGAAAACGGTGAGTACCCTGGACACTTCGTAG

Protein sequence

GTYQETREELGVQTKDSRLDAGVREQVQVGVTSELANMKFELASMKTELVGKKFEFAGLTSKFSGVKLDIVVMLGYLKQLVKGKHVDDQALNGSGDENGDDSKPRSSTGFGGPLGSIGRDSENWQDREAVAFDALIHEEDADPSKHSPSIEEDDLASKKDDHSCYGQNIEASQFRDMEVRGNLGSQPYCCEAGDQELDTRSIPYGAIRYFSPRRIRTSELSKTVSTLDTS
Homology
The following BLAST results are available for this feature:
BLAST of ClCG01G010400 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G010400 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G010400 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G010400 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G010400.1ClCG01G010400.1mRNA