ClCG01G010390 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G010390
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr01: 15688116 .. 15688930 (-)
RNA-Seq Expression	ClCG01G010390
Synteny	ClCG01G010390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAAGAGACATCAAAACGACTGACAATGCAGTCGCATCAAGCCAGCAGCATCAAAAAGCAGAGACTACAGAAAAAGAGGGCGATGCGGGCACATCACCTCTCCAACACCGTAAGGGGAAAGCCCCTATGATTGAAGAGGAGGAGAACCTTGCTTCTCTTTTCGTAATATGAGATAAGAGGACGAACACCTGAAGACAGTTCGTTGAAATCCACATCAGCTAGACATGTGGAAGAGATTGAGAGGCCTTCGAAGGCCAACGTGGTAGCTCCAAGAAGAGTCACTAAATTCGCCTCTACAGGTAAAAGGAAGGCGGATTCGAGCTCAACCGCCCTCACTCAGAAAAGAGCAAGAGTACAGGGTGTATAGCAGGTTGTGCTCTCCTCGTCTAGTAACTCTAAAGACGAGGGAGAGTTGGAGCAACGTAGGAAAGCCCTCGGTTGGAGGAATTTTTTTTATGAATGTGGATTTTCGGGGAGAAGTGGTGGCATCTTGCCTGAGTATGTGAGGTTCAGCATTGAACACTATGAGTGGGAAGTGCTTGCCAGCCTGCCAGCCCACTTACATTTGCTAGCAGCTCTTTAGTTAAAGACTTCTACTTGGGGTTGTGGCCTAAGAGGGACATCTCCTTGGTCTGAGGAGTCCAAGTGGATTTCTCTGCTAGGGGCATCAATGAGGTGTATATGGTCCTCAATAAGGAAGGGGACGAGTGCAGAAGGAAAATGTACGCTCCCATTGAGGAGCAGGTGGTCGAGGCACTCAAATTGGTAGCACTTAAAGGACACGGGATGCAGGACACTACGACCAAGTGA

mRNA sequence

ATGGTGCAAGAGACATCAAAACGACTGACAATGCAGTCGCATCAAGCCAGCAGCATCAAAAAGCAGAGACTACAGAAAAAGAGGGCGATGCGGGCACATCACCTCTCCAACACCATAAGAGGACGAACACCTGAAGACAGTTCGTTGAAATCCACATCAGCTAGACATGTGGAAGAGATTGAGAGGCCTTCGAAGGCCAACGTGGTAGCTCCAAGAAGAGTCACTAAATTCGCCTCTACAGGTAAAAGGAAGGCGGATTCGAGCTCAACCGCCCTCACTCAGAAAAGAGCAAGAGTACAGGGTTTAAAGACTTCTACTTGGGGTTGTGGCCTAAGAGGGACATCTCCTTGGTCTGAGGAGTCCAAGGGCATCAATGAGGTGTATATGGTCCTCAATAAGGAAGGGGACGAGTGCAGAAGGAAAATGTACGCTCCCATTGAGGAGCAGGTGGTCGAGGCACTCAAATTGGTAGCACTTAAAGGACACGGGATGCAGGACACTACGACCAAGTGA

Coding sequence (CDS)

ATGGTGCAAGAGACATCAAAACGACTGACAATGCAGTCGCATCAAGCCAGCAGCATCAAAAAGCAGAGACTACAGAAAAAGAGGGCGATGCGGGCACATCACCTCTCCAACACCATAAGAGGACGAACACCTGAAGACAGTTCGTTGAAATCCACATCAGCTAGACATGTGGAAGAGATTGAGAGGCCTTCGAAGGCCAACGTGGTAGCTCCAAGAAGAGTCACTAAATTCGCCTCTACAGGTAAAAGGAAGGCGGATTCGAGCTCAACCGCCCTCACTCAGAAAAGAGCAAGAGTACAGGGTTTAAAGACTTCTACTTGGGGTTGTGGCCTAAGAGGGACATCTCCTTGGTCTGAGGAGTCCAAGGGCATCAATGAGGTGTATATGGTCCTCAATAAGGAAGGGGACGAGTGCAGAAGGAAAATGTACGCTCCCATTGAGGAGCAGGTGGTCGAGGCACTCAAATTGGTAGCACTTAAAGGACACGGGATGCAGGACACTACGACCAAGTGA

Protein sequence

MVQETSKRLTMQSHQASSIKKQRLQKKRAMRAHHLSNTIRGRTPEDSSLKSTSARHVEEIERPSKANVVAPRRVTKFASTGKRKADSSSTALTQKRARVQGLKTSTWGCGLRGTSPWSEESKGINEVYMVLNKEGDECRRKMYAPIEEQVVEALKLVALKGHGMQDTTTK

Homology

The following BLAST results are available for this feature:

BLAST of ClCG01G010390 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G010390 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G010390 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G010390 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010390.1	ClCG01G010390.1	mRNA