ClCG01G009910 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G009910
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RPM1-interacting protein 4-like
Location	CG_Chr01: 14366553 .. 14370192 (+)
RNA-Seq Expression	ClCG01G009910
Synteny	ClCG01G009910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTTTCAGATTAACAAATTTTTTAACCCAATTAGGTAGGGTCATATATATTTTAGTAAAGCAACAACATTCACTAATTACAAAGTTAACGAGGCCAAATTTACTTCCAACAAAAAGATAATCAAATAAAAAAATTATCTAGACAATAATGAGATTGAGACCTCTGTCTAGCAAGCTAACTCATCTGTCATCATATTTTGAGAACGATGAACGTAAAGAAACTGAATCTCGATTTGCACTCATGGACAAAATATTAATTGCAACTAATTTCACTGGAGTGAGCAGCTCTTCCTCCCCACTCATCAACTGCTCAACTATTACGTTGTCTGACACAACCACTAAAGGTGACTACACCATCGAGAGCACCTCCCGCAATCTAGCCGCAATTGCACTAACCTTGGCAAACAACCCTCCATCATGTTGCAACGAGAACACCCCTATGATCTCAAAGCGCCCAACTAATACCACCCTTACATTCTGAAATGTCCCAAGCAACATCACATGAAAACCCCATCCATTGCTCTAGGGGGTAGGCTCATACAACCTATGCATCGTCTTCTTGTACCCCACCCTCACTCAAGGTACAATGTCCACCTATAGAGCCAGATCCCACAACCTCTGTACCCCAAAAGGGTGTGACCGAACCTTGAATTTAGTCCATCGTGGTCCCCACATAGTCATATCCCTTACAAAAGACCACACAGTTATGACATTCCCAAATATGCACAATACAACAATGAAGATCATCAAATCATTAAATAATCCTGCGAGACACATTCACTCATCAAATTAATCCTGCGTGCCATATTCACTCATCCATTTAAAGAGTGAGGACATTTTCATTGATATATGTGAATAGAATCAAATAGAATCAACTCAAAATAAATATAAATCACTCATAATAGTCTAAATTGATTCACTTACTAAAAATTTGTAGTTTAAATTGATATAACTATTAATTTGAAAATTTAATTGCATACAACTTGTTCAAAGGATAAAAATTTATTATGAATTAATTATATTCCTAATGTAATAAGTTGTTTTAACATTAGTCTAGCTTCCATGGAGAAACTTTCCTGTTAATGCCACGTCACTCAAGATTCATGTACACTAAATTTATTTTTTCGAAACTTTTTAAAAAGTAAAAGGTTAAATAAATTTTCGAAAAAACAGGGGTATTTTTTAAAGTGAAGGATATTAAATTTTTGTTGATATATCTATATTTTCACTGATATTTCTACATTTCTCTAAACTTAGCATCAATATGAAAAATAAATCAACAATTTCATTATATCATAAAAGAATTCATAAAAAGTAAACAACAATTGTTAGGAGTGCAATCAAAGTTCCACATTAGTTAGGAAAGTAAATGATCATAGTAAGGAAAAATATCTCTATTAGTATGAAGCATTTTGGGTGGTTTCAAAAGCAAAGTCATGAGGATTATACTCAAAGTAGATAATATAATAGCATTATAGAAATACATTGAGGATCGCTATTGTTATAAAAAATCACTGACATCGAAATTTTCTTAAAATTTCAGTATTTTAAATCTTGATTAAAAGATATTCTTCCTAATTTAGTTAGAAAAAGAAACAAGAACAAGGAAAAAAAAAAAATAGATACCAACAATAGAAACAAAGTAAAAGGCCAAAACACAATAAAACACATCGAAAACGAACTTGGAAACCATCGAACTAAAATCGACTGATCAAAAAACTTTCAACCTCTTTACTCCTTACTCCTCCATGTTCCTCTCTTCTAACAATACAAACTTTTCCAAAACTCCGCCGTTGCCGCCGCCGCAGCAACCACAGAGCTGCCACAGCTCATGGCAGTGAGTGTTTTTTTTTTTTTTTTTTTCCTTGTCTTTTTTTCATCAGCACAATTACCATCTCAAATTAAATCATATTAATTACTAATAGAAGAATGAAATTTGTATTAATAATCTTCAATTAATCAATCTAATGGGCAGGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGGTAATTTTACATTTCTAATCATTTAATCGAACGTTGTGTTTAAAATTCATTAACAACCATTTAAAATAGTTTCTAAGGTGTATTTTAAACTATTTTTATTCAAAAAAAAAAAGTTTAAATAAAAATAAATTTTTTTTTAAAAAACATTATTTTTCTCAATTCAATTTAAACGGGCCCCTTGAAGTTGATGGTAAAGACTTCTGAATGATTTATCTTGATTATTTGGCATTAGTTTCTAATTAATGAAAAATTAAACTTATAAAAATTACTTTCATTTATCTATGAGTTTCATTGTTTTGATATCATATTTTACTATTGGTTTGAAACAACCAAACCAAAATTTTAAAACTAAAAGAAAATTAAAAGAGATGTTTTGCAAATATAAGAAAATAACATTGTCTGTTAGTGATAAATACTAAAAGACATCTATCAATGTCTATAACTGATAGACTATAACTAATAGATGATAATAGTCTATTAGTAGACAGTAACATTTTGTTATGTTTGAAAATATTTTCAGCAGTTTTGTCATTTATAATAATTACTTAAAATAAAAACTAAAAGTTAAATAATTACCAAATAGAGTTTAATTTTAACCTAACAATTTAGGTCATGACAAATTTAACAAGATAACAAGATTCTTTGAACATTGGAATTAAAATGATAAATAGTAACAACATCACAAATTTAAACTTTTTAGATTGCTTTTTTATTTTTAACCACTTAATAAGTAAAATCAAAGCATACTTTAAAACTTATATTTGAAAGTGCCCTTTTCATGTCAATCCATCAATGTTTTTATTTATAAAATTTAGTAAATTATATAAACAAGTTTAACTTTTAAAATGATAGAAAATAAATTTTAATTTTTTTTTCCTATGAACTAAATATAATTATTTAAAAAATAGTAAAGAATTTGTCCGTTTATTTATGCAGATATGTTGCTGTTTATGTCCAAAGTGAAGCACATCATCACTGCTCCAAGAGTACACAGAAAATAGTGGAAGTGTTTTGCTGA

mRNA sequence

ATGAAAATTTTCAGATTAACAAATTTTTTAACCCAATTAGGTAGGGTCATATATATTTTAGTAAAGCAACAACATTCACTAATTACAAAGTTAACGAGGCCAAATTTACTTCCAACAAAAAGATAATCAAATAAAAAAATTATCTAGACAATAATGAGATTGAGACCTCTGTCTAGCAAGCTAACTCATCTGTCATCATATTTTGAGAACGATGAACGTAAAGAAACTGAATCTCGATTTGCACTCATGGACAAAATATTAATTGCAACTAATTTCACTGGAGTGAGCAGCTCTTCCTCCCCACTCATCAACTGCTCAACTATTACGTTGTCTGACACAACCACTAAAGGTGACTACACCATCGAGAGCACCTCCCGCAATCTAGCCGCAATTGCACTAACCTTGGCAAACAACCCTCCATCATGTTGCAACGAGAACACCCCTATGATCTCAAAGCGCCCAACTAATACCACCCTTACATTCTGAAATGTCCCAAGCAACATCACATGAAAACCCCATCCATTGCTCTAGGGGGTAGGCTCATACAACCTATGCATCGTCTTCTTGTACCCCACCCTCACTCAAGGTACAATGTCCACCTATAGAGCCAGATCCCACAACCTCTGTACCCCAAAAGGGTGTGACCGAACCTTGAATTTAGTCCATCGTGGTCCCCACATAGTCATATCCCTTACAAAAGACCACACAGTTATGACATTCCCAAATATGCACAATACAACAATGAAGATCATCAAATCATTAAATAATCCTGCGAGACACATTCACTCATCAAATTAATCCTGCGTGCCATATTCACTCATCCATTTAAAGAGTGAGGACATTTTCATTGATATATGTGAATAGAATCAAATAGAATCAACTCAAAATAAATATAAATCACTCATAATAGTCTAAATTGATTCACTTACTAAAAATTTGTAGTTTAAATTGATATAACTATTAATTTGAAAATTTAATTGCATACAACTTGTTCAAAGGATAAAAATTTATTATGAATTAATTATATTCCTAATGTAATAAGTTGTTTTAACATTAGTCTAGCTTCCATGGAGAAACTTTCCTGTTAATGCCACGTCACTCAAGATTCATGTACACTAAATTTATTTTTTCGAAACTTTTTAAAAAGTAAAAGGTTAAATAAATTTTCGAAAAAACAGGGGTATTTTTTAAAGTGAAGGATATTAAATTTTTGTTGATATATCTATATTTTCACTGATATTTCTACATTTCTCTAAACTTAGCATCAATATGAAAAATAAATCAACAATTTCATTATATCATAAAAGAATTCATAAAAAGTAAACAACAATTGTTAGGAGTGCAATCAAAGTTCCACATTAGTTAGGAAAGTAAATGATCATAGTAAGGAAAAATATCTCTATTAGTATGAAGCATTTTGGGTGGTTTCAAAAGCAAAGTCATGAGGATTATACTCAAAGTAGATAATATAATAGCATTATAGAAATACATTGAGGATCGCTATTGTTATAAAAAATCACTGACATCGAAATTTTCTTAAAATTTCAGTATTTTAAATCTTGATTAAAAGATATTCTTCCTAATTTAGTTAGAAAAAGAAACAAGAACAAGGAAAAAAAAAAAATAGATACCAACAATAGAAACAAAGTAAAAGGCCAAAACACAATAAAACACATCGAAAACGAACTTGGAAACCATCGAACTAAAATCGACTGATCAAAAAACTTTCAACCTCTTTACTCCTTACTCCTCCATGTTCCTCTCTTCTAACAATACAAACTTTTCCAAAACTCCGCCGTTGCCGCCGCCGCAGCAACCACAGAGCTGCCACAGCTCATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGAATTTGTCCGTTTATTTATGCAGATATGTTGCTGTTTATGTCCAAAGTGAAGCACATCATCACTGCTCCAAGAGTACACAGAAAATAGTGGAAGTGTTTTGCTGA

Coding sequence (CDS)

ATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGAATTTGTCCGTTTATTTATGCAGATATGTTGCTGTTTATGTCCAAAGTGAAGCACATCATCACTGCTCCAAGAGTACACAGAAAATAGTGGAAGTGTTTTGCTGA

Protein sequence

MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIPADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGGSKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFKNLSVYLCRYVAVYVQSEAHHHCSKSTQKIVEVFC

Homology

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BLAST of ClCG01G009910 vs. NCBI nr
Match: KAA0054298.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 372.9 bits (956), Expect = 2.2e-99
Identity = 196/252 (77.78%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ SIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFKNLSVYLCRYVAVYVQ-SEAHHHC 240
           S +PQ VPPLMNQTKQP+ +TT A T+T+G TSF  K             VQ SEAHHHC
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK-------------VQISEAHHHC 237

Query: 241 SKSTQKIVEVFC 251
           SK+  K +  +C
Sbjct: 241 SKNRLKTMHPYC 237

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BLAST of ClCG01G009910 vs. NCBI nr
Match: XP_038895247.1 (RPM1-interacting protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 362.1 bits (928), Expect = 3.9e-96
Identity = 186/225 (82.67%), Postives = 196/225 (87.11%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTICFENARELRA G+ FDPNDPDTYPPAAV+NQ S P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+R      DYHQRR +GNSGSEKLSSERSGSDYALLKEAKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 121 TPTTTV---GGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQ 180
           TPTTTV   GGKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQ
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSKSPQAVPPLMNQTKQ-PIAKTTTATNTRGPTSFAFKNLSVY 222
           IGGS +PQAVPPLMNQTK+ PIA+TTT   T G  SF  K L  +
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKVLITF 220

[Close]

BLAST of ClCG01G009910 vs. NCBI nr
Match: XP_038895249.1 (RPM1-interacting protein 4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 361.3 bits (926), Expect = 6.7e-96
Identity = 185/220 (84.09%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTICFENARELRA G+ FDPNDPDTYPPAAV+NQ S P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+R      DYHQRR +GNSGSEKLSSERSGSDYALLKEAKQSGRKKK+SNGAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 121 TPTTTV---GGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQ 180
           TPTTTV   GGKGNRNPRVRRN+EGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQ
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 181 IGGSKSPQAVPPLMNQTKQ-PIAKTTTATNTRGPTSFAFK 217
           IGGS +PQAVPPLMNQTK+ PIA+TTT   T G  SF  K
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSK 215

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BLAST of ClCG01G009910 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 357.5 bits (916), Expect = 9.7e-95
Identity = 183/217 (84.33%), Postives = 192/217 (88.48%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ SIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFK 217
           S +PQ VPPLMNQTKQP+ +TT A T+T+G TSF  K
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK 215

[Close]

BLAST of ClCG01G009910 vs. NCBI nr
Match: XP_011660296.1 (RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_007241 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-89
Identity = 176/217 (81.11%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A GITFDPNDPDTYPP AV NQ S P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           A++ R+HDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P  TV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQ+GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFK 217
           S   Q+VP LMNQTKQPI +TT   +++ G TSF  K
Sbjct: 181 SNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSK 215

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BLAST of ClCG01G009910 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.8e-17
Identity = 65/207 (31.40%), Postives = 98/207 (47.34%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRATGI-TFDPNDPD----------TYPPAAVVN 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  QKSIPA--DNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKK---KN 127
            + +     +R H   R+  + +  G++G    S+E +        +      K    KN
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLHKN 123

Query: 128 SNGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFN 187
           S    G SR  PT            +R +   E +  VPKFG WD  +P S DGYT IFN
Sbjct: 124 SYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFN 183

Query: 188 KVKTEKQIGGSKSPQAVPPLMNQTKQP 198
           KV+ E+  G + S  +  P    ++ P
Sbjct: 184 KVREERSSGANVSGSSRTPTHQSSRNP 197

[Close]

BLAST of ClCG01G009910 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of ClCG01G009910 vs. ExPASy Swiss-Prot
Match: Q8S3M3 (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.7e-05
Identity = 53/219 (24.20%), Postives = 86/219 (39.27%), Query Frame = 0


Query: 8   SHVPKFGNWDSDDVPYTICFENARELRATGI-TFDPNDPDTYPPA------AVVNQKS-- 67
           +HVPKFGNWD +++ YT  FE     +  G   F+PNDP+  P A      A  +Q S  
Sbjct: 5   AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDHQHSEK 64

Query: 68  -----------IPADNRRHH--DGRDYHQ--------RRAIGNSGSEKLSSERSGSDYAL 127
                      +    R+HH  + R++H+        R        +   S   G+   +
Sbjct: 65  HHNDTSTDYHVVKQHRRKHHRREDREFHRYVEAPRPHRSPFQGVDMDSHRSRNHGTSATM 124

Query: 128 LKEAKQSG---------RKKKNSNGAEGMSRFTPTTTVGG--KGNRNPRVRRNNEGEMMA 186
               K++           ++ N + AEG S    TTT     K  +  R   +     ++
Sbjct: 125 SSSVKRNSDNWLPQHQHHRRTNKDLAEGKSWLFTTTTASSYTKSRKLSRECSSTTQSSIS 184

[Close]

BLAST of ClCG01G009910 vs. ExPASy TrEMBL
Match: A0A5A7UH42 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001090 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.1e-99
Identity = 196/252 (77.78%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ SIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFKNLSVYLCRYVAVYVQ-SEAHHHC 240
           S +PQ VPPLMNQTKQP+ +TT A T+T+G TSF  K             VQ SEAHHHC
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK-------------VQISEAHHHC 237

Query: 241 SKSTQKIVEVFC 251
           SK+  K +  +C
Sbjct: 241 SKNRLKTMHPYC 237

[Close]

BLAST of ClCG01G009910 vs. ExPASy TrEMBL
Match: A0A1S3C9P5 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.7e-95
Identity = 183/217 (84.33%), Postives = 192/217 (88.48%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A G+TFDPNDPDTYPPA   NQ SIP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           AD+ RHHDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P TTV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQIGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFK 217
           S +PQ VPPLMNQTKQP+ +TT A T+T+G TSF  K
Sbjct: 181 SNNPQTVPPLMNQTKQPMTQTTVAKTSTQGSTSFVSK 215

[Close]

BLAST of ClCG01G009910 vs. ExPASy TrEMBL
Match: A0A0A0M0M0 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89
Identity = 176/217 (81.11%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+A GITFDPNDPDTYPP AV NQ S P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
           A++ R+HDG D HQRR I NSGSEKLSSERS SDYALLK AKQSGRKKKNSNGAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
           +P  TV GKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVK EKQ+GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTA-TNTRGPTSFAFK 217
           S   Q+VP LMNQTKQPI +TT   +++ G TSF  K
Sbjct: 181 SNDTQSVPALMNQTKQPITQTTVGKSSSHGSTSFGSK 215

[Close]

BLAST of ClCG01G009910 vs. ExPASy TrEMBL
Match: A0A6J1CND0 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.9e-68
Identity = 151/222 (68.02%), Postives = 166/222 (74.77%), Query Frame = 0


Query: 5   KSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAA--VVNQKSIPAD 64
           KSSSHVPKFGNWD+DDVPYTICFENA ELRA G+TFDPNDPDTYPP A    N +S P+D
Sbjct: 4   KSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAFPAANHRSNPSD 63

Query: 65  NRRHHDGRDYHQR------RAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEG 124
            RRHH   D+H+R      R   +SGSEKLSSERSGSDY+LLKE    GR+KK +NG +G
Sbjct: 64  RRRHH---DHHRRPREQPNRDRRSSGSEKLSSERSGSDYSLLKE--PGGRRKKINNGVDG 123

Query: 125 MSRFTPTTT-VGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTE 184
           +SRF PT    GG  N NPR RR NEGEM+ASVPKFGSWD RDPKSGDGYTAIFNKVK E
Sbjct: 124 ISRFPPTAAGHGGNPNPNPRARR-NEGEMVASVPKFGSWDARDPKSGDGYTAIFNKVKME 183

Query: 185 KQIGGSKSPQAVPPLMNQTK-QPIAKTTTATNTRGPTSFAFK 217
           K+IGGS S QAVPPL NQTK QPI +        G TSF  K
Sbjct: 184 KKIGGSNSSQAVPPLTNQTKQQPIPQI-----VHGSTSFVSK 214

[Close]

BLAST of ClCG01G009910 vs. ExPASy TrEMBL
Match: A0A6J1GSU2 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 7.1e-59
Identity = 137/216 (63.43%), Postives = 151/216 (69.91%), Query Frame = 0


Query: 1   MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIP 60
           MAG KSS HVPKFGNWD+DDVPYTICFENARELRA GITFDPNDPDTYPP          
Sbjct: 1   MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVFKPVAHDG 60

Query: 61  ADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRF 120
            +++R    +   +R AI NSGSEKLSSERSGSDYALLK++K+        NG EG+SR 
Sbjct: 61  GEHQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALLKKSKE--------NGVEGISRL 120

Query: 121 TPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 180
            P   V G G  NP           ASVPKFGSWD RDPKSGDGYTAIFNK+K EKQI  
Sbjct: 121 AP--AVAGHGG-NP-----------ASVPKFGSWDARDPKSGDGYTAIFNKMKIEKQIAA 180

Query: 181 SKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFK 217
           S +PQ+VPPLMN+TKQPIA T T   T G TSFA K
Sbjct: 181 S-NPQSVPPLMNKTKQPIAHTNT---TSGFTSFASK 190

[Close]

BLAST of ClCG01G009910 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 90.1 bits (222), Expect = 2.7e-18
Identity = 65/207 (31.40%), Postives = 98/207 (47.34%), Query Frame = 0


Query: 8   SHVPKFGNWDSDD-VPYTICFENARELRATGI-TFDPNDPD----------TYPPAAVVN 67
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTK 63

Query: 68  QKSIPA--DNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKK---KN 127
            + +     +R H   R+  + +  G++G    S+E +        +      K    KN
Sbjct: 64  PEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLHKN 123

Query: 128 SNGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFN 187
           S    G SR  PT            +R +   E +  VPKFG WD  +P S DGYT IFN
Sbjct: 124 SYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFN 183

Query: 188 KVKTEKQIGGSKSPQAVPPLMNQTKQP 198
           KV+ E+  G + S  +  P    ++ P
Sbjct: 184 KVREERSSGANVSGSSRTPTHQSSRNP 197

[Close]

BLAST of ClCG01G009910 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-07
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG-SKSPQAVPPLMNQTKQPIAK 201
           +PKFG WDV DP S +G+T IFNK + EK+ GG S SP    P  N+  + + K
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLEK 61

[Close]

BLAST of ClCG01G009910 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 8.1e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of ClCG01G009910 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 8.1e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]

BLAST of ClCG01G009910 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 8.1e-07
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 148 VPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGG 181
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

The following BLAST results are available for this feature:

BLAST of ClCG01G009910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054298.1	2.2e-99	77.78	RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-inte...	[more]
XP_038895247.1	3.9e-96	82.67	RPM1-interacting protein 4-like isoform X1 [Benincasa hispida]	[more]
XP_038895249.1	6.7e-96	84.09	RPM1-interacting protein 4-like isoform X2 [Benincasa hispida]	[more]
XP_008458983.1	9.7e-95	84.33	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_011660296.1	2.7e-89	81.11	RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Cs...	[more]

BLAST of ClCG01G009910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	3.8e-17	31.40	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
O22633	1.1e-05	60.61	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8S3M3	9.7e-05	24.20	NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1	[more]

BLAST of ClCG01G009910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UH42	1.1e-99	77.78	RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C9P5	4.7e-95	84.33	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=...	[more]
A0A0A0M0M0	1.3e-89	81.11	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G69...	[more]
A0A6J1CND0	2.9e-68	68.02	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 P...	[more]
A0A6J1GSU2	7.1e-59	63.43	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE...	[more]

BLAST of ClCG01G009910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	2.7e-18	31.40	RPM1 interacting protein 4	[more]
AT2G04410.1	2.8e-07	48.15	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	8.1e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	8.1e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	8.1e-07	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 146..177 e-value: 2.1E-15 score: 55.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..130
None	No IPR available	PANTHER	PTHR33159:SF49	OS06G0636100 PROTEIN	coord: 5..213
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 5..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G009910.2	ClCG01G009910.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane