ClCG01G009290 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGCCGTTCTTATCCACTTTACTCCCTTTCTTTCTTCATCCTATAAATCCTTCATTTCAGTGGTTTCTCTCAAGTACTCAGCATTCTGAAATTGATTTTAAAGTTGTAATCACAAAATCAAGTTCTTGATCTTCTTGTGAGAGCTTTACAAATCCAATAATGACAACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGATACCATCAAGGTTTGCTCTTTGCACATTCTTTTTTTTTTTAAAAAAATTAAATTACTTTGCATCAAACTCAAGATTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTAATCACTATTTCTTACATTTTTCTAACAGGATCTGATTTTTCATTTGATAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAGTATCACCAACCCAAATGTGTAAGTGTCACTGATCTCTAATACGATTAAGAATATGAATATAAGATTAAAATTTTTGTCATTATTTGCTTATACATTTGAGTAGAATAGCTAGTAATTTAATATTGAATAGAGTATAAGTCGATCTTGTGTTTGAATTCTTATAATTTTTCATTTTTCTGTTATGGTACTAATTTTCAAGCCGACTAGTGAAAGAGAAAGTTTGAAATATGAATAAAAGAAACATGATAGTCTCTAGAGGAAATTCTTTTCATGACTTAAAGAGTACTTAGAGCAAAGAGTGGAGTTATGATGTTTGGAAAGTTAGGAAGTCCTAGGGTCCCCAATGTAAGGAACCTCAATAAAACATAAAATTGATGTTTTTTAGTTATAGGACCTACGAACTTGTTGGATCACTAACACAAGGAGGGGAGTTCATAACTCCAGTACTCTCTTAAGTCCTTTGGCCAAATGCTCTCCTAAAGAATTTATCATTCTACGAGTTCCCAGCTTGTCAAGCAAACGTAGTCAGGTTTGATGATAACTTTTATAAATTAGACGAAGTTGTGTGTAAGCTAGTCCAAATACCTTCAAAAGAAAAAGACAATCAAGAATATAACACAACATTATTGTATAATATGTGATAATTAGTTGTATAAATTTCTTTGCAGGCCAGGAAGTTTGTACATTGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAATTGGTAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGGTGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATCTTAAACCTATCACCATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTTAACACCCAAAGAGTTCAAGACCATCCATCTCGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGAGGATTGCAGATCCATGATGCATTCGTTCAGAAGGTTGCCTAA ATGACGAGCTTTACAAATCCAATAATGACAACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGATACCATCAAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAGTATCACCAACCCAAATGTGCCAGGAAGTTTGTACATTGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAATTGGTAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGGTGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATCTTAAACCTATCACCATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTTAACACCCAAAGAGTTCAAGACCATCCATCTCGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGAGGATTGCAGATCCATGATGCATTCGTTCAGAAGGTTGCCTAA ATGACGAGCTTTACAAATCCAATAATGACAACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGATACCATCAAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAGTATCACCAACCCAAATGTGCCAGGAAGTTTGTACATTGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAATTGGTAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGGTGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATCTTAAACCTATCACCATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTTAACACCCAAAGAGTTCAAGACCATCCATCTCGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGAGGATTGCAGATCCATGATGCATTCGTTCAGAAGGTTGCCTAA MTSFTNPIMTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWSITNPNVPGSLYIAELKQVSWLEVTCSTDNVQIGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKVA Homology
BLAST of ClCG01G009290 vs. NCBI nr
Match: XP_038894850.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 331.6 bits (849), Expect = 4.2e-87 Identity = 154/176 (87.50%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of ClCG01G009290 vs. NCBI nr
Match: XP_008459054.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043232.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa]) HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84 Identity = 151/176 (85.80%), Postives = 160/176 (90.91%), Query Frame = 0
BLAST of ClCG01G009290 vs. NCBI nr
Match: XP_004145459.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66903.1 hypothetical protein Csa_006885 [Cucumis sativus]) HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77 Identity = 141/178 (79.21%), Postives = 159/178 (89.33%), Query Frame = 0
BLAST of ClCG01G009290 vs. NCBI nr
Match: XP_022142416.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70 Identity = 129/176 (73.30%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of ClCG01G009290 vs. NCBI nr
Match: XP_022142415.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 265.0 bits (676), Expect = 4.8e-67 Identity = 124/174 (71.26%), Postives = 143/174 (82.18%), Query Frame = 0
BLAST of ClCG01G009290 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33 Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 0
BLAST of ClCG01G009290 vs. ExPASy TrEMBL
Match: A0A5A7TIU6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G001140 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 7.3e-85 Identity = 151/176 (85.80%), Postives = 160/176 (90.91%), Query Frame = 0
BLAST of ClCG01G009290 vs. ExPASy TrEMBL
Match: A0A1S3C9E6 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498278 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 7.3e-85 Identity = 151/176 (85.80%), Postives = 160/176 (90.91%), Query Frame = 0
BLAST of ClCG01G009290 vs. ExPASy TrEMBL
Match: A0A0A0LYR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G708660 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.0e-78 Identity = 141/178 (79.21%), Postives = 159/178 (89.33%), Query Frame = 0
BLAST of ClCG01G009290 vs. ExPASy TrEMBL
Match: A0A6J1CM42 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012557 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 7.8e-71 Identity = 129/176 (73.30%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of ClCG01G009290 vs. ExPASy TrEMBL
Match: A0A6J1CKW1 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012556 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.3e-67 Identity = 124/174 (71.26%), Postives = 143/174 (82.18%), Query Frame = 0
BLAST of ClCG01G009290 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 144.4 bits (363), Expect = 8.9e-35 Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 0
BLAST of ClCG01G009290 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 132.1 bits (331), Expect = 4.6e-31 Identity = 73/179 (40.78%), Postives = 101/179 (56.42%), Query Frame = 0
BLAST of ClCG01G009290 vs. TAIR 10
Match: AT5G45080.1 (phloem protein 2-A6 ) HSP 1 Score: 44.7 bits (104), Expect = 9.6e-05 Identity = 28/104 (26.92%), Postives = 52/104 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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