ClCG01G009278 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G009278
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	DNA-directed DNA polymerase
Location	CG_Chr01: 12734923 .. 12741638 (+)
RNA-Seq Expression	ClCG01G009278
Synteny	ClCG01G009278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGGTTGTTCAATGAAAGGCATGTGCCTTGTGGTGGTCATGATGAGTGTGGTTGTCAATGAAACTCAAATGGTAGAGGCAGTGAGATGCGAGGAAAAAGAACTAAGGCCATGTCTTTTCTCGTTGGTGGAGCCATCGTCAACTTGTTGCAACAAGGTGAAGAAACATAGACAATGTTATCGTGGGTACAAGAAAAATCCAAATATTCAACACTATTTACAAGAGGATGCCACCAGAAAAATCATTTCTCAATGTGGGGTTACCACCCCAAAATGCTAGGATTTAAATATGCTTTGCGTACAATTTCATTTCATATTAATTAAATGATGATGTATACACTTGTTTTAAAAGATGATCATTACACAATATCTTTCTTACTACCTGCTTCACCCTCATTTTTAATCATCTAATCTATTTACTTTACGACAGAATAGTTACAATTATAAACACACGATTCTAGTAATAATAATTACGTTATTTTAATAATTAAATCATTCTCACTTTCTTGTAGTTCCTAATGTTGTTTATTTTGTTTCTAACGTTTTGACTTAATTTCTCTCGTTCTATGTTTGATTTATTATAGCTCATTTGTTATGAGAGCTCTCAACTTTGTTATTGTGGTTAATCAAACGTTCCAAAATTGTTCTTAAACTACCTTTGTAGGTAAAATAAAATAAATAAGAAGAAAGAACTCAAGTATTCCAGTTTGTCTCTACTTAGATAATATTTTTTATTGTAGTGAAATAGCAATATGAATGAAAAATTAATCCATAATCCTTTTATGAAATAGATTGAGGTCAGATTTGAAGAACTTTTTATTAAAAATAATTATTAGAAACTAAGTACATTGAAAAAACTTCAAAAACCAACACTAGTATTAGAGGTTCTACACTATTATTTGAATACACTATCAAGGTTTGTGGGAATATGATATAAGAAATCGAAATATAATTTTTTGTGGAAGGGTTAAGCGAGTGCGTCTTATAGAGAGAGACACCAATTTTTTCTTTTGCCCATGTGTCCAATTTATGTGAATCAAGACAGAATTTTGGAAAGTGCATTTTCATCGTAATAATTTTTGTTTGACCTAGATGTTAGCTTAAACCCATTGTATTGTGACAACCCAAATTTTGAATTAATTTTTAATTTTATCTTAAATTATTTGGGTGTTATTTTGAGTTTTAAGGTTAAAACTAAATTATTGTGATTAAGATAATTCTATTTAAATTAAGCGTTAAAATTTAAAATTTTGGAACTTTGGATTTTATTTAATTTTAATCGAATTTGTGAAAATTGAATTGAAATTGGGAGATTTGGAAGTTTATTTGTAATTTGGAGATATTTTGAGGAATTGTGTAACCCTACTTTCATTCTCAGTATTCTTGGGAAAGATGGCAAGCAAGTAGGTAGGTAAGAGCCTTTGTTATGGAGTAGTCGGGTAGTGCATGGCCGACAAGAAAAGTGACTAAGTGTTGGAGCATGTGTGGGAGACCTTGCGTAGCTGAGCCACCAAGAGAGTGTATGTGATGTGTCTTGCTTCGTGAGGGATGCGTCCATGGTGAGCTTGGTTGAAGATGTTGATGCATTGCTTGTTGGGCAAGTTGGGCTATGCATCCATGAGTTGGATACGTTGGTTGAGGTTAATGGAGGGAGCTTAGTACGATGAGACTATGCGTCCAAGGAGGCTTATGAGGCTGACGTATAGTGGGTTGACATCCAAGTCGACAACCATCAGCCAAAACGGGTTGTGTGCATGGGTAGCCGAGAAAAGTAGCCAACTAACCTCAAATAGATGCTTGAACTATGTGTGGAGAAATTTTTCCCAAGGATGCGTCCACTATTCCTTCTACCTTAAGCAAAGTTGATACTTAAGTATTAAGCAAGTCAGATTAGTTGTCAAAATTGGGTCAAGTGTGGCTTGGGCTTGCATGCAAGTAGGAGGTGACAAGCTAGGATCTTGCATGCAACTTTCTGGGAAGGCTATAAATAGAAGGGTTCAACAGATGAGGTTGGTGTGTGCAAACTACTCGAGCTATTTGAGAGTTTCTTCGGCCAAATTGTTTCAAATTAAGTCTAGTTTAACTAAGAGAGCTATTTGAAGGAAACTCATTGAGAAAGAACTCGAATTTCATCAGAAACTCAAGCTTACTTTGGCTATCGGGTGAATTAGAGTAGAGCAGAAAGATATAGTGATACTATCAATAGAAGAAAAGTTAGAAGCTGAAATTTTGAGGTAAGCTAACCAAGATAATTATCTATAAGTGTGTAAGAGACAGTAACGTCTAATTTTGGCTAGAAAGATTACTTATGGCAACTGGAAGTGAAGATAGTGTTTTTAAGGCTGTCGGGTGCGATTTGAAGGAGCTATGCATGCAGACAAGCTAAACCAGTGGTCGCAGGCTATCGACGAAGGTAACAAACGCACGCGCGCCCTGCCACTTTTGAAAGATATTTTGACAATACGTGTGCGGGGACTGCTGCCCACGAGAGGCAGTGTGTGTGAGGAAATGGCTGGACATTTGGGCAGCGTGCCTATGCGAGGATTGCTGCACATTTGAGGTTAGACAGGCTGGATGAGTGTGTTGAAGGGTTGTTAGACACACTTAGGGGCAGCTTACAACTTTTGGACATTTTGGTTAGTTTTTGCTTACTGGGAAGAGCTAGGGGAAGTTTATAATCCACTAAGAGCCCAAGACAAGTTGTGAGAACATGGTTATATGATTCTGCTTTCATGAGTTTTAACGTGCATATTATCTGTTTTATATTGAAAATCGTTTGAAGTATGCTGGTTGTTTAATGAGTTTATGAAAAGCATGTTGTTGTTAATTTAGGATTTAATGGAAAGCATTGAAGCTTATGAATGAAATTATGAAGATTTGAGATGTTAAAAACTCGTGAATTTATATTATGCCATTTGTAAACGTTATGTTTTTGAATGATGTTGTGAAAAGACTCCCAATGCTGAAGGACACGGAGAAGGCATGTGGGTAGTTGGGATATGAAAATGGTTCCCAATGCTGAAGGACATGGAGAAGGCATATGGGTAGCCGGGGTATGGAAATGGTTCCTAATGCTAGGACTCGGAGAAGGCATGTAGGTAACCTGAGTATAGAGATAGCCCCCAATGCTAAAGGACTCAGAGAAGGCATGCGTGTCACATCCTATTTTTTTTAAAGAAACGATGTGTTGAAGAATTTATGAGGAAAAGAGGTAAAAGACCATGTTGGACACATGGTCAGGGCTAGGTAACACATGGTAAGGGTGGACGCATGGAAGTAAATCGAGAATGGAAAGAAGTGAAGCGGATAAGCAAAAAAAGAATAAAGTTAAATTGTGAAGTGTTGAAGAAAGTTGTGAAGTAAACATAAAAACTGGTGCATGTGATGGACGCATGCTAATCTATCCTTAAGAGAAGTAGTCTAAGTTCAAGGATAGGAAGATGGTCATTGAACGCAGGATGAAGGTAAACGTGATAGGACCAACGCGTAGAGAAAGAGCTTGAGAAGGAGTTGTTATGAACATAAGGAAGGAGTTGGACGCATGATATGATGCGATGAGATACAAACACAGTATTGGGCGTTTGTCATTAACGCCTAGTAACATTGTGTAAGCACTGGTTTATAATAGTGCGGCTATGCGTTGAGGGTGATCACGAACGGTAGTGAACTGAAGTAGTCGCCGCGTTGGCGGAGGAAGAAACGTACTTGGCTTACCATGCATTGTTAAGGATGTTAAGCATTGAGGTCCCTATGCGTTGAAGACAGTTATCCTTACGCGTCAAAGAGTAGTATGATTGACTGTGAGTTAGAAAAATGAGTAGTGAAGCTCAAACATTAAAGAAAACTTAATGAACACATGAGGGCGTTGTGTTGAATAAATGGTTATCTGTTGGAAATGTTGGACGCATAAGATAAGTTTATAAGGCCAGGTGGCTATGTATAGATTTGACACCTTATCAGTAGGAGGTGTTAAAGGCATGTTAAGTAAATCATGCAAGGTGACACTTGGACTAATGCATGGTTAATTAAGCATGTAGCATGACATGTGGCAAACAAGTGGCAAAAGGAGAGGAAAAGGGGGATGGCAAGCTCCCTATAAATAAAACTTTGAGGGAAGAGGAGCGACTGATGACTCCCAAAGAAGAATTCTGGAGAGAAAAGAGAAGAAGGTAACAAGGACGTCTGTGGTAAGAGTATGCGGCCAACAAAGAAGGTATTTGACAACTTTGTTATTTTATGTAAAGAAGTTGTCTGGTGTTAAAAGGGTCGGCTATGCATTGAGGACAAACATAATGTCCAAGGTGAATGCGGCTTCCACAGATTAGATGACACGTTCATGATGGACCTTGCGTCCAAGAGAGGGCAACACATCCGAAAGGGAAGTATGAAGAGTCGGGATGCACTTGGCAGAAATAATCAACTTACCAACCTTGCATTGAAGGCTAGGGATGCGTTCAACCGAGCTGACAGAGGAAAGTGGAGCCTTGCGTTCCAGAGTTAGAACGCTGTGTTCAGAAAGCTCGGAAAGAGGAAATAGAGCATAGGAAGAAGAAGGATTCTTTGGCTAAGTACATGTGAGTAACACCTGCGTTTTACAAAATATAAAAGGGATCTTAATGAATATGATTTTATGGGTTTCTAATAGAACAATGTATGCGTTTTCATATATATAAAGTATGTGATTATGTGATTTATAGAGACATGAGCATGCGTCTTAGAGACAAGAGCATGTGTTTTACTTGAGAACTCTGAGAATGTTGGGTACTTGCTATGAGTTATAAAACGCATGATGAATGATTGATATTTGTTTTCATAACTTCTCTGAAAAGCATGGTATTATATGATTTCAAGAAAGATCTGAAAGTAAACTTAATCAAAAGCATGCGGTTTTATATTAAAATGTGAAATTGAACTTAGCATGCTGATGAGATGAGATTTCGAAACGGTAAACTCATGAGTTATTGATATAACGTTTATAAATATGTTTTGTGTTATATTAAACTTGAAAAGGCACCCGAGGCTCAGGGACATGGAGAAGGCCAAAGGGGTAGCCGTTCTATTAAAATGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGTGGGCGGCTCGGAATATAAAGGTACCCAATGCTCAGGGACTCGTAGAAGGCATATGGGTAACCTGGATATAGAAGTGGGACCCCAATGCTCAGGGACTCGTAGAGGGCATTGAGGGCAGCCCGAGTTTTAGTACCTATGTGCACATAAAGGTATATACGACGCTGATGTGTTGTGATTACTCCACACAGCTAGGGAAAACCGACGTTGAGTAGCGTTGAGTAGTACTTCGCCTCAACTAAGGAAAAAGTATTTTATAAGAATGAGATTTTGAGAATTTTGAGTATTTAATCTGTAACGGTCAAACATGTTTTCACGATGATGTTTGAGTATAATTTAATATGTTTTGAAGTGATATGTTTTATGCGAGTTTGACCAGTTTTTCAGTTAAAATATATTGTTATTAGAAATCCATTACTCACTGAGTCGTTAGTTCATTCTTTTAAATGTTTTCCATTTTCAGGTAGCATGACAGTTTTCGTTGCCGATCGAAGTCGAGGTTTGTCAAGAGCATTTGGATGGGAAGGTTGACAGTGGGTTACGTGACAGGGTAGTCGGTAACTGCTGTCTTTATATCTCTTCTTGGGTTATGGAGGATAATCTGGGAGGGGGTGTGACAATGTGGGTGGCCTGAACCTCGTATATAGGCCCCGGTACTGAAGAACTTGGAGAAGGTATTCGGGTAACCCAAGATAGGATATCTATGCGCACATAGAGGGATACTAGACGCTGTTATGTTGAGATTACTCCACACAACTAAGGATTTTTTACGTTGGGTGTGTTGAGATTACTCTGCCCCAACTAAAGATGTTTTCGACGTTGAGTAGCGTTGAGTTCCGCTTCACCTCAACTAAGAGAAATAATTTGAAATAAACTGAATTTCTGAGTATCTTTTCCTGGAATAAACATATATGATTTGACAATGCTATTTGAGCATGTTTTGCATTGGATATGATTTTGAATCGAAAGTTTTATACGTATTGTTTTATAATGTTTACACTATAATTAGTTTTCGATTTAAAGGAAAATATTTACAAAACAAGTCACTCACTAGGCAACCTAGCTCATGTTTTCCTTGTTTTTCTATTTTCCAGATAGCGAGCGAGTCCGGGGTGCTTAGCCTACATAGAAACTCGTATGGGCCCATCATCAATGTTTAGTATTTTGAGAATTGTAAATACTTGAACTTAATCATGTACATATAGAGGGTTAAGGGTGTTGTTGTGAAACTTATGTAATTATATGTTTCTAAGTGGAAAACAATGTCTGTATGATAACTTAACCATGGACTAAGTATGATATGCAAGTATTGTGTTTCACTGCTTATTAGGTGACGATCAAGTTTTATGGTTGGTAGTGGATGCTGTAAGAGGGTCGGTGTTTGTTGTCATCACACTTTTTCCTGGGTAAGAAGGGTACCTAAGAGAGGGTGTGACAGCTAATTGATCAATTGCTCATCCTTACAGCATTGTGGAGGACGTATTGGTTAAGCTGCACAAGTTTATCTTCCTGGCAGATTTTGTGAAACTAAACATGGAGAAAGATGCTGAAATTTCCATAATTCTTGGAAGAACTTTCTTGGCCACTGGAAGGGCTCTCATTGATGTATAA

mRNA sequence

ATGAAGAAAGGTTGTTCAATGAAAGGCATGTGCCTTGTGGTGGTCATGATGAGTGTGGTTGTCAATGAAACTCAAATGGTAGAGGCAGTGAGATGCGAGGAAAAAGAACTAAGGCCATGTCTTTTCTCGTTGGTGGAGCCATCGTCAACTTGTTGCAACAAGCTGAGCCACCAAGAGAGTGTATGTGATGTGTCTTGCTTCGTGAGGGATGCGTCCATGGTGAGCTTGGTTGAAGATGTTGATGCATTGCTTGTTGGGCAAGTTGGGCTATGCATCCATGAGTTGGATACGTTGGTTGAGCGTGCCTATGCGAGGATTGCTGCACATTTGAGGACACGGAGAAGGCATGTGGGTAGTTGGGATATGAAAATGGTTCCCAATGCTGAAGGACATGGAGAAGGCATATGGGTAGCCGGGGGTCGGCTATGCATTGAGGACAAACATAATGTCCAAGGTGAATGCGGCTTCCACAGATTAGATGACACGTTCATGATGGACCTTGCGTCCAAGAGAGGGCAACACATCCGAAAGGGAAAGTTAGAACGCTGTGTTCAGAAAGCTCGGAAAGAGGAAATAGAGCATAGGAAGAAGAAGGATTCTTTGGCTAAGTACATGCACCCGAGGCTCAGGGACATGGAGAAGGCCAAAGGGGTAGCCGTTCTATTAAAATGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGTGGGCGGCTCGGAATATAAAGGTACCCAATGCTCAGGGACTCGTAGAAGGCATATGGGTAGCATGACAGTTTTCGTTGCCGATCGAAGTCGAGGTTTGTCAAGAGCATTTGGATGGGAAGGCCCCGGTACTGAAGAACTTGGAGAAGGTGACGATCAAGTTTTATGGTTGGTAGTGGATGCTGTAAGAGGGTCGGTGTTTGTTGTCATCACACTTTTTCCTGGCATTGTGGAGGACGTATTGGTTAAGCTGCACAAGTTTATCTTCCTGGCAGATTTTGTGAAACTAAACATGGAGAAAGATGCTGAAATTTCCATAATTCTTGGAAGAACTTTCTTGGCCACTGGAAGGGCTCTCATTGATGTATAA

Coding sequence (CDS)

ATGAAGAAAGGTTGTTCAATGAAAGGCATGTGCCTTGTGGTGGTCATGATGAGTGTGGTTGTCAATGAAACTCAAATGGTAGAGGCAGTGAGATGCGAGGAAAAAGAACTAAGGCCATGTCTTTTCTCGTTGGTGGAGCCATCGTCAACTTGTTGCAACAAGCTGAGCCACCAAGAGAGTGTATGTGATGTGTCTTGCTTCGTGAGGGATGCGTCCATGGTGAGCTTGGTTGAAGATGTTGATGCATTGCTTGTTGGGCAAGTTGGGCTATGCATCCATGAGTTGGATACGTTGGTTGAGCGTGCCTATGCGAGGATTGCTGCACATTTGAGGACACGGAGAAGGCATGTGGGTAGTTGGGATATGAAAATGGTTCCCAATGCTGAAGGACATGGAGAAGGCATATGGGTAGCCGGGGGTCGGCTATGCATTGAGGACAAACATAATGTCCAAGGTGAATGCGGCTTCCACAGATTAGATGACACGTTCATGATGGACCTTGCGTCCAAGAGAGGGCAACACATCCGAAAGGGAAAGTTAGAACGCTGTGTTCAGAAAGCTCGGAAAGAGGAAATAGAGCATAGGAAGAAGAAGGATTCTTTGGCTAAGTACATGCACCCGAGGCTCAGGGACATGGAGAAGGCCAAAGGGGTAGCCGTTCTATTAAAATGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGTGGGCGGCTCGGAATATAAAGGTACCCAATGCTCAGGGACTCGTAGAAGGCATATGGGTAGCATGACAGTTTTCGTTGCCGATCGAAGTCGAGGTTTGTCAAGAGCATTTGGATGGGAAGGCCCCGGTACTGAAGAACTTGGAGAAGGTGACGATCAAGTTTTATGGTTGGTAGTGGATGCTGTAAGAGGGTCGGTGTTTGTTGTCATCACACTTTTTCCTGGCATTGTGGAGGACGTATTGGTTAAGCTGCACAAGTTTATCTTCCTGGCAGATTTTGTGAAACTAAACATGGAGAAAGATGCTGAAATTTCCATAATTCTTGGAAGAACTTTCTTGGCCACTGGAAGGGCTCTCATTGATGTATAA

Protein sequence

MKKGCSMKGMCLVVVMMSVVVNETQMVEAVRCEEKELRPCLFSLVEPSSTCCNKLSHQESVCDVSCFVRDASMVSLVEDVDALLVGQVGLCIHELDTLVERAYARIAAHLRTRRRHVGSWDMKMVPNAEGHGEGIWVAGGRLCIEDKHNVQGECGFHRLDDTFMMDLASKRGQHIRKGKLERCVQKARKEEIEHRKKKDSLAKYMHPRLRDMEKAKGVAVLLKWDPNAQGLVEGIVGGSEYKGTQCSGTRRRHMGSMTVFVADRSRGLSRAFGWEGPGTEELGEGDDQVLWLVVDAVRGSVFVVITLFPGIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV

Homology

[Close]

BLAST of ClCG01G009278 vs. NCBI nr
Match: XP_014506227.1 (uncharacterized protein LOC106765980 [Vigna radiata var. radiata])

HSP 1 Score: 73.2 bits (178), Expect = 5.2e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIFLADFV L+ME+DA++ IILGR FLATGRA IDV
Sbjct: 547 GIVEDVLVKVDKFIFLADFVVLDMEEDAKVPIILGRPFLATGRASIDV 594

[Close]

BLAST of ClCG01G009278 vs. NCBI nr
Match: XP_014506502.2 (uncharacterized protein LOC106766276 [Vigna radiata var. radiata])

HSP 1 Score: 72.8 bits (177), Expect = 6.8e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIF ADFV L+ME+DA++ IILGR FLATGRALIDV
Sbjct: 150 GIVEDVLVKVDKFIFPADFVVLDMEEDAKVPIILGRPFLATGRALIDV 197

[Close]

BLAST of ClCG01G009278 vs. NCBI nr
Match: XP_017416412.1 (PREDICTED: uncharacterized protein LOC108327189 [Vigna angularis])

HSP 1 Score: 72.8 bits (177), Expect = 6.8e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIF ADFV L+ME+DA++ IILGR FLATGRALIDV
Sbjct: 623 GIVEDVLVKVDKFIFPADFVVLDMEEDAKVPIILGRPFLATGRALIDV 670

[Close]

BLAST of ClCG01G009278 vs. NCBI nr
Match: XP_017420031.1 (PREDICTED: uncharacterized protein LOC108330072 [Vigna angularis])

HSP 1 Score: 72.8 bits (177), Expect = 6.8e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIF ADFV L+ME+DA++ IILGR FLATGRALIDV
Sbjct: 476 GIVEDVLVKVDKFIFPADFVVLDMEEDAKVPIILGRPFLATGRALIDV 523

[Close]

BLAST of ClCG01G009278 vs. NCBI nr
Match: XP_014511445.1 (uncharacterized protein LOC106770135 [Vigna radiata var. radiata])

HSP 1 Score: 72.8 bits (177), Expect = 6.8e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIF ADFV L+ME+DA++ IILGR FLATGRALIDV
Sbjct: 150 GIVEDVLVKVDKFIFPADFVVLDMEEDAKVPIILGRPFLATGRALIDV 197

[Close]

BLAST of ClCG01G009278 vs. ExPASy TrEMBL
Match: A0A1S3UJL2 (uncharacterized protein LOC106765980 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765980 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIFLADFV L+ME+DA++ IILGR FLATGRA IDV
Sbjct: 547 GIVEDVLVKVDKFIFLADFVVLDMEEDAKVPIILGRPFLATGRASIDV 594

[Close]

BLAST of ClCG01G009278 vs. ExPASy TrEMBL
Match: A0A1S3UZG8 (uncharacterized protein LOC106770135 OS=Vigna radiata var. radiata OX=3916 GN=LOC106770135 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIF ADFV L+ME+DA++ IILGR FLATGRALIDV
Sbjct: 150 GIVEDVLVKVDKFIFPADFVVLDMEEDAKVPIILGRPFLATGRALIDV 197

[Close]

BLAST of ClCG01G009278 vs. ExPASy TrEMBL
Match: A0A1S3UKE1 (uncharacterized protein LOC106766276 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766276 PE=4 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-09
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 310 GIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           GIVEDVLVK+ KFIF ADFV L+ME+DA++ IILGR FLATGRALIDV
Sbjct: 150 GIVEDVLVKVDKFIFPADFVVLDMEEDAKVPIILGRPFLATGRALIDV 197

[Close]

BLAST of ClCG01G009278 vs. ExPASy TrEMBL
Match: A0A2G9HJD9 (RT_RNaseH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09710 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-09
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 305 ITLFPGIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           +T   G++ED+LVK+ KFIFLADF+ L+ME D+EI IILGR FLATGR LIDV
Sbjct: 28  LTYSKGVIEDILVKVDKFIFLADFIVLDMEADSEIPIILGRPFLATGRTLIDV 80

[Close]

BLAST of ClCG01G009278 vs. ExPASy TrEMBL
Match: A0A2G9IBE4 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00161 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-09
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 305 ITLFPGIVEDVLVKLHKFIFLADFVKLNMEKDAEISIILGRTFLATGRALIDV 358
           +T   G++ED+LVK+ KFIFLADFV L+ME D+EI IILGR FLATGR LIDV
Sbjct: 260 LTYPKGVIEDILVKVDKFIFLADFVVLDMEADSEIPIILGRPFLATGRTLIDV 312

The following BLAST results are available for this feature:

BLAST of ClCG01G009278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_014506227.1	5.2e-09	79.17	uncharacterized protein LOC106765980 [Vigna radiata var. radiata]	[more]
XP_014506502.2	6.8e-09	79.17	uncharacterized protein LOC106766276 [Vigna radiata var. radiata]	[more]
XP_017416412.1	6.8e-09	79.17	PREDICTED: uncharacterized protein LOC108327189 [Vigna angularis]	[more]
XP_017420031.1	6.8e-09	79.17	PREDICTED: uncharacterized protein LOC108330072 [Vigna angularis]	[more]
XP_014511445.1	6.8e-09	79.17	uncharacterized protein LOC106770135 [Vigna radiata var. radiata]	[more]

BLAST of ClCG01G009278 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG01G009278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3UJL2	2.5e-09	79.17	uncharacterized protein LOC106765980 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
A0A1S3UZG8	3.3e-09	79.17	uncharacterized protein LOC106770135 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
A0A1S3UKE1	3.3e-09	79.17	uncharacterized protein LOC106766276 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
A0A2G9HJD9	3.3e-09	67.92	RT_RNaseH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=C...	[more]
A0A2G9IBE4	4.3e-09	69.81	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00161 P...	[more]

BLAST of ClCG01G009278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33067:SF17	SUBFAMILY NOT NAMED	coord: 310..357
None	No IPR available	PANTHER	PTHR33067	FAMILY NOT NAMED	coord: 310..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G009278.1	ClCG01G009278.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding