ClCG01G008940 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAAATCCAAAAGAGAGTACTTGACTTCATTCCACCTTTCAACTTGGGAATACTATCAAAACCCGTTATTCATACTCCCTCGTTAATAAATGAATTGGGGGACCACATTATAAAGTAGCATATTCATTTCTCATGGGGGAAACCCAAGAAAGTACCTGACTTGGCTCCGCCTTTTAGCTTGAGAATATTATTGAAAGACGTATGTACTCTGTCGTCTGGGCTGAGTCAAAGAACTTCAAGCAATCCACTTCCCTCCTTGCATGTCCCATCCATCATTTTACATAAGGAGTTTAGGATCAACATTGGAATATTACCAAAAGGTGTGCAAATTTCTTCGTTTGGGTCGAGTGACAGAACCTCAGATTATCCACCACCTCCATCACGTGCTCCTTCCATTATTTGAAAGAAAAAATCTTAATAAGTTTAATTTTTGGATGTATCCTAGAGCACCTATTCCACTCTTTACTGGAACAGGAAAGGTACCATTATGAGTACTTAATCAACCCTAGTTTTGTCGTTATCTCACTCTTTTGAGGACTCATTTTAATTGCTCCATCATCTTCATTTTTGTGGAACAATTTAAACATTTATTGTACATTGATTTCACCATAAAAGTGCTATTTTTCCTAGCTTAATTCAAGATTGTTTGTTGATTTTGTCATGTTATTCCTTGAATTTTAGGTTTTGAGCATTAAGAGGTAGAGTAGACCATTGAAGTCAAAACAAGACAAAAATGAACCAAAACGGAGCTCGAAAGCATTAACCATGCAGAGAGAGAAGAAAAATGACCAAAATGCCCTTGTGGAGCGTTGCTAGTGTGTGCCTTGCACTGTGCTCTACATTATTAACCGAAGAGCAAAAATTTCATAGAGCGTTACGATGTTGTAGGGGAGTGCAGCAACACTCCGGAGATTGATGAGAAATGGCAAAGCGCACTCGCACGCAAGAGCGCAGCGCACAACGTCGTTACACTCAAGATCGGCGCTACAACTTATATGGGCAACACTGTCCCCTCGATATAA ATGGGGAAAATCCAAAAGAGAGTACTTGACTTCATTCCACCTTTCAACTTGGGAATACTATCAAAACCCGTTATTCATACTCCCTCGTTAATAAATGAATTGGGGGACCACATTATAAACTTGAGAATATTATTGAAAGACGTATGTACTCTGTCGTCTGGGCTGAGTCAAAGAACTTCAAGCAATCCACTTCCCTCCTTGCATGTCCCATCCATCATTTTACATAAGGAGTTTAGGATCAACATTGGAATATTACCAAAAGGTGTGCAAATTTCTTCGTTTGGGTCGAGTGACAGAACCTCAGATTATCCACCACCTCCATCACGGGAGTGCAGCAACACTCCGGAGATTGATGAGAAATGGCAAAGCGCACTCGCACGCAAGAGCGCAGCGCACAACGTCGTTACACTCAAGATCGGCGCTACAACTTATATGGGCAACACTGTCCCCTCGATATAA ATGGGGAAAATCCAAAAGAGAGTACTTGACTTCATTCCACCTTTCAACTTGGGAATACTATCAAAACCCGTTATTCATACTCCCTCGTTAATAAATGAATTGGGGGACCACATTATAAACTTGAGAATATTATTGAAAGACGTATGTACTCTGTCGTCTGGGCTGAGTCAAAGAACTTCAAGCAATCCACTTCCCTCCTTGCATGTCCCATCCATCATTTTACATAAGGAGTTTAGGATCAACATTGGAATATTACCAAAAGGTGTGCAAATTTCTTCGTTTGGGTCGAGTGACAGAACCTCAGATTATCCACCACCTCCATCACGGGAGTGCAGCAACACTCCGGAGATTGATGAGAAATGGCAAAGCGCACTCGCACGCAAGAGCGCAGCGCACAACGTCGTTACACTCAAGATCGGCGCTACAACTTATATGGGCAACACTGTCCCCTCGATATAA MGKIQKRVLDFIPPFNLGILSKPVIHTPSLINELGDHIINLRILLKDVCTLSSGLSQRTSSNPLPSLHVPSIILHKEFRINIGILPKGVQISSFGSSDRTSDYPPPPSRECSNTPEIDEKWQSALARKSAAHNVVTLKIGATTYMGNTVPSI Homology
BLAST of ClCG01G008940 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida]) HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11 Identity = 52/120 (43.33%), Postives = 64/120 (53.33%), Query Frame = 0
BLAST of ClCG01G008940 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-11 Identity = 52/103 (50.49%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of ClCG01G008940 vs. NCBI nr
Match: KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 9.0e-11 Identity = 54/119 (45.38%), Postives = 60/119 (50.42%), Query Frame = 0
BLAST of ClCG01G008940 vs. NCBI nr
Match: KAA0037987.1 (hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 2.0e-10 Identity = 53/119 (44.54%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of ClCG01G008940 vs. NCBI nr
Match: XP_031744003.1 (abl interactor homolog [Cucumis sativus]) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09 Identity = 50/96 (52.08%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of ClCG01G008940 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 8.8e-12 Identity = 52/103 (50.49%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of ClCG01G008940 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11 Identity = 54/119 (45.38%), Postives = 60/119 (50.42%), Query Frame = 0
BLAST of ClCG01G008940 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 9.7e-11 Identity = 53/119 (44.54%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of ClCG01G008940 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09 Identity = 40/74 (54.05%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of ClCG01G008940 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 8.0e-05 Identity = 42/96 (43.75%), Postives = 48/96 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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