ClCG01G004860 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G004860
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	SWR1 complex subunit 2
Location	CG_Chr01: 5140505 .. 5156242 (+)
RNA-Seq Expression	ClCG01G004860
Synteny	ClCG01G004860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAACAAATTTACAACTTGCAGCTTCTTGCTTAGCAATAATTAATAAATAATAATTCATCATGAACTATCACAGAATTGAAACACCATAAACATATCACTGCCTCTGCTTAGTAACATTTGTTACAAGATTGAAACAAAGAAATCCCAAAGAAAAGAACATTTTTATAGCTGGAAAATAAGTGAGGACAATATATATTGAGTACCTTAACAATCCAACACCTAAGGAATTCCCCTTTATGCACCATATCTGTATTGATACTACAAACAAATGCTGCCAAACTACATTAGTAACCATCCAAGGGAGAAGAGAACACAAACAGTATCGTAATTGAACACAGAACCCCGACGAGTTCAATCTGTGGTCCTGGGTAACTCTTTCTTCATTGTGGTTTTGTGTACTCTCAATAAAGGTCGAGTGAATCGCCATCCCTTCCAGCCTTACTATTTCTCCTCAAACTCCACATCAATGACATTGGGTTGTGACTTGGAACTAGAACTACCTTTTCTTGAATTGTATTCCCCTTGGCCTTTAGGCTGCCACACTATGTTTCCACAGCCTGTGCATGAAATAATTTGGTTCTTGTACCCAGCAAATTCTCTATTACAGGCTGGACAAGTACCCTGTACAATTATTTAAACCTCGTTTAGGAAAATATTTATACAAACAATAAAAATATTAAAGTAAAACCTAGATGAGAAGTTTTGAACCTAAAGGTTCAAGTTTATATCTAAAGACTTTGAACCTAAGAAGTGTTTAATAGGGTCTTGAACTCCCAATTTTGTGACTAACAAGTACTTGAATTTTCAATTTTGTGCCTAATAGCACCTTAATTTTTCAATTTTATATCAAATAGGTCCTTGACTTATGTGACATTTTATAAAATTCACCGATCTGTTATAAAAAAATAATTGAAAATTTAGAGCTTTATTAGGCCTAAAATTCAATTTAATGTCTAAAAGATACTAATTTAAAATGCTGAATATATTCTGGACCTATTATACACAAAATTGAAAGTTCAAAAACCTATTAGACATCATTAATAAATTTCCACTTCACCAATGCCACATCATTTTCCTTAGATAACTAAGAGTCAAATTTAACCTAGAAACCATTTTGAACTATTTTTCAAACCTTAGAAACTAAAAGTGTCACTTTTGTAACTTCAAGGACCAAGTAGATATTAAACTCAAAACTCATTAATCAATATTATAATCCTGACCAATGTTAAGCAAATTGGTTGATGATATTCCAAATTTCATCATATAAGAATCTCAAATGCTCACGTGCAACTCTAACAAAGTCGATTAACATAACATAGTAGAGTATTATAAAAAAGAGAGTATTTATGTTATCTCTAACACACCCTCTGTGCTGCTTAACCTAATATTTATGATATTTTTTCTCCAACACTAAAGAGACGTTTTATTATGGAGGTTGGAACGAGAAATCACAAGGCCGGAATGTCAGATTGAGAAGAAGCTTCTTTGACATAGAAATACAATGTCGTCTTCAGTTTTTCCTTCAAACTTAAGTCCTAAATCCTACTAGGCTGGACCGGAGAAGTACAATAGTTTGGAACCTAGAGAATAAGGGCTCCTGTTCTTGCATATCATTGACGTTCAATATGACGGAAAGAAGAAGATTCATATTGTTTGGCAGAACCACTTCCCATGTTGGAAATGGACAGCATGTAATTCCAGTATTTTGTGCCATGGGGCAGCTAACCCACAGGAGATTGGTTCTCCAAACTTTTCTTGCACATGAAACACCAATATTGAAGAAAGAGCTAGCCTAAGGAGCGTTTGTGGATCTCTCTTGGCTTGATGCTAGCGTGACTTAGCTCCCATTGAAAGAAGTTTACCATTTTAGGATATTTACCTCACCAAATATCAGTGTACATTGGTTCCTAGAATTGGCATTGCCTCTTAAATAAGTCTTTGTTGAGTGAGATGAAGAAATAATTTTGATGGACCGGCCACATCCATTTGTCAGCACATTCATTGGGCATCACGAGGGAAAGGGCTTCCAAAAGAGTGTTCCATTCAACTAGTTCATCATCACAAAAACTTTTCCAGAATTCCAAGTCCCAAAATAAACAGGGTTTTTATTTTATTTATTTATTTATTTTTATCAAGAGGCACCCAAAATAAACAAGAATTGTAGACTCATTAACAAAAGCTGAAACATTGCTGGAAAGGGCAAAGAGAAATTGACTCCTAATTCTCTAAATCTAAAAATTTCTTCTGAAGCGAAGGGACTGCTCACCCAAGAAATTGTGCAGCAGTTACAGAAATAGCCTTACGATTGGGCAATGGCAAATGAGGAGGGGAGTCAGATTTCCTGTGGTGAAATGCAAAACTGCCACGGAAGTTGTGATGAACATTTGATTATAAAAATTGGTAGTGGAATTCTAGAATATGACTATACGAGTTGGGAAGAACAAGAACCTCCAAGATTATTCCTCAACCCCAGATACCAGATATCTTCCATAAAGAATGGGAGAGTGGCAGACTTTTTTCCGACAGGAAGAAATCTTAATTTTATTAGGCCACTTAATGATATTGAAAGTGATGATTGAGCTACTCTCCTATTACTTGAAAGCTGGTCCCTAATAAAAAAATAAAACAAAATAAAGGTATAAAAGGCATTATTTTCTACTTAAATTGTTTGTAGTTGTACACAACGCTTCACTAAGATATCATCAATTTTAGTAATCATTAAAAGGTACGATAGGTGGCTTCTTTAACAAGATTAATTTTAAGTGTTTGCACCATTTTGAACTAGGACTAGCATAATCATCACACAAAGCTGATAGATTTTAGTAATTATACAGATGCACAATATCACTTATACAATCGCAAAGGATCAGCAAGGCACATACCTTTATTACAAGGCTATTGGCAAAAGTCCCAATGAGTAGTGGACCAGCAAACGGTAGTATCCACGTCGCAAATATCAAGAATCGGAAAAGCCATCCAGACAGTGCAAACCAAAGGAAGAATATTGTCTACAATGAAATGGAAAGATGAATTTACGAGGTGATACATGAAGAAAAGGAAAGAGAAGAATAAATTAGGGGCAGAAAATTCTTTCTCTTCATTCATAGTTCAATTCAGTGTGTATTTAGAAGTTTAATATTGAAAGCTAGTTTATTTACAGCAGAAGACTTCTTTATTTTAAAATCCAAACTCTAACTAAAATTTCTATTTCTAATTGGATGTCTATGTCGTCGTCGGGTTCAAATCCTAGAAATTGGATGTCTATGTCGTGGGAGTACAAGTCTAATAAGTTTCTTAGATCAATTAAGTTTGTTGATCTTTAGGTACAGCTGGTGTAAATTCGTCTAGCAATTATTATGAACACATAACTATGGTTTTACTTGATTTCCACCTGTTGTTGACAGTGGCAAGAAAATTCAAGCCTTAAAGTCTAGTTGACTGCTAAGATATTGTGATGGATTCCACAAATCTCCTATTTTCTGCTCTTTTTCCTAATAAATAATAAACAAGAATCTGATTTCAGATTGTGACAGTTTGAAAATCCCTTTCAAAAGCCACAAACCCTCACATTGAACCTAAAATTAACTTCAATTACACAGTATCTACAGAAACGTGGGTTCAACTGCCAGAATATATAAATCAATCAATAGAACTTATATTCTAAATATACAATTATAATTTGCAACTATCATGCCCAAATCAAATTACATGAGTGGTTCAATGGAATGACCACCTAACTCTACAACATTTTCAACCGAGTTTCTTAATGATGTGAGTTATTTATGTATTATTTTGTACTGCCATTTGTCTTTTACCATAGTAAAACAATTATAACAATGGTGGTAATAGTTCTTCCTTTCAGTTATTAGGTTTGGTGGTTGACTGGAAGTACTAGACATAGGCTGATGACCTGCAAAAGCCAACCCTCATACTTCTTGATCATTCCTTCATTCGTAAACATAATTTCTAATCATTTATTTTATTTCTACATCAAAGTGGTACAAAGAGTTACACTCATCCAACCCAGGATGGCATCAGCAAGATTCAACAGAAAGAGGAGGGTGAACCACACCAACAAAAAGGTTACAGGCTGCTTTATTTTTTAAATCCAACAATGGACAGAAGAAAGAATGTCATCAAAGATGTTTGGACAAATATACCACGATCTATTTGGGCACAAAGAATCAAAATGGCATAAATTTTAGACCTTGGGGGTTTGGGCATAGGTAAATTTGACTTTTTTTTGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGGGGCGCTAGCTAACAAACAAAAAGTCTCACCATCAGCCCTCTCCCTCTCTGTTCATTCTACTCCTTTCCCTTCTCCCGCTATGAAAGTCTCTATCCACTTTCACCTCTATCTTTTGCAGATTCACACCTCTGTCTCCATATGTAAAGTTCTTTTGTAATTACCTTTTAGGTCTCATTTTCCTTCATTGAAGCCTCTTTTTGTATTAGTTTGGCTCCTTCAGAGATTTTTATTTGTATTCCCTTTGTATTTTCCCCCCTCAATAAAGATTGGTTTCTCATTAGCACAAAAATAAATAAATAACGCACTTCGGGTTATTGCCTAATGGGATCCCAAAGTAAAAAGAAGGAAGATGGCTCACCTCACAGCCTACAAGAGCAGCTCAAGAACTCAACTTAGAAGAATCACACGATACAGATGATCAAACTTTTTCCTCTATTTATTCTTAAGACCAAAAATATATTAAAAAAGAAAAAAAGTTAGATGATCATTCAGAATAATAAAAGAACTTTCCTAAGCCCTTCTTCCAAAGGATCTTATCCAGGAAATCATCAACATGATTGTAAGCTTTTTCAAAACCTATCTTAAAGATTACATCTTCTTGTTTCCTCTTTAGCAATTAGCACTTGATCCAAAATTTGTCTTCCTCCTATGAAGGCTCCTTATGAGTTAGAAACCGTACTAGGGTACTAGGAGGACTTCTCTTAATCTATTTGACAAAATTTTAGCAAATAAACATTGGCGGATAGATTTTATGACTGCAGAAGCATGAGATTGCAAACTCAAAAACAAGTTTAAAATTCAACCTTGATTAAAAATTTGACAACCACAAGAGAAGTATCTCAAATGCTTCAACTCCCAAATTCTGTAGTCTTGATATAGAGCTAAATCTAAACCTTTTGTAAGTTATCCTATTCTTCTTTATTATAGTCAATTAGTGAGCTTTATATACCTTCCTCAATTGTTCTATGGACAGATTCTTACTCTCCCCTCCCTTGTACATAGGACATCATTCTAAGTTATTGTTAGGAACCAAGACAGTAGGGGCTACCTTTGTCCCACATTGGTTAGAATGAGATGACCAATGTGGTACTTAAGTGGCTTGGCACTCCCACTTCAATAGGTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACAATGGTATTAGAGCATTGAGGTGGGAGAGCCAAGCCACTCAAGTCCCACATTGGTCATCCCATTCTAACCAATGTGGGACAAAGGTAGCCCACACTACCTTGATTCCTAACAGCTATACTACATAATATAGCATTGAGAATAGTAGATTACATGTAAATACCAAAAAAAAAACATACACGAGACAACTTGGCATATTCTAGACTTAGGCATGGACACTCCTTACTAGTCCAACCAATAATCTTAAACTTGAAGAGTGGCATCCGACTATTTCAACCATTGAAGTACTTACTCTTGGACGAGCAATCTAAACTCTAGTCAATATATAACCACAAAATTTTTCAAGCATTTGTTTGCAACACTTCAAATATCAAACAAATTCATGATTTTTTTAGCCCAATAAATGACACCCCCACAATTTCTGCCTATTACTCCTAGATTGTCCTCTCTCTGGTAATCCACATTCACATAGCTTCATCTAGTCCCACCACATGGATTTCCATCTTTCAAACTTAAGAATGAAACCACGCACAAAGTTTCATCCTTCATTAAGTTCCTCTAACTTCCTGACAATCCCTTTAAGTATAAAAGAAAATCTCTAAAATTCATGTAATCTTCATGAGTTATCTTCTCAAAGCTTCCAACAAGGTGAACCAGTCATATTGGAGATGAAGTCTTATCACAACTATAGTTTTTTTATTATTGTTGTTGAAATCAACACTATGCCAGGTGGGAGATTTGAACATATGACCCTCTTGGTTGAGGCCACTTGCTTTATGTCAGCTGAACTATGCTCATGTAGTCATGTTGGCCACAACTATTGTATGTTCCAATCAACTTGAGCAAACTCAAATATCATCTTCACTATGGATTATTTTTCTCTAATTGATCGACATATTTCCTTTTAAACTCAGCCTATTCCTCTACTTTGTATTCTTCCTTTCCCCATTGAGTTTTCCTCCCTCCCAAGTGAAATTATCCCCCCTTCAAAATCATTCTTCCCTTGGATTTCTTCCTTTCCCAACTGAAATTAACCTTATCCTGGTATTAGCTTTGACCTTATAACCAACTAATAATTGTGCAAGAGAATTCTCCTCATTTTCCCCCTTGCACTCAAGAAAAAACTACCCAGATTCTTCCTATCTAATAGCACCTTTGTGAAGTCACCCAACAATTCCCAAAAAACCAAGGACCATTGTCAACTCCTGCTGGAACCAAATATATCTCCTGACACGCCATCTGAATAAGTGGTGATTTCCACATATTCCATTATGATTTGGACAAAGTTCCTTCAAAGAAACTTTCTTGAAGAACTAAATGTTCAATGGACATTGAATAACTTTTAACAGTAATCGTTCCAACCAAAGAAAGTGCTCCAAATAAAATCTGATGTAGAAAAGAAACTCTATCAAGAAACCTCAAGAAATATCAGCTAAACTAATACAAGAAGACTTGTTTTACAGCCCGTAGTCCATGGCACTCATAAGATATAAGTTCATTTTCAAAAAAGAGAGAAGGCCTACCATTATTCTATTTGATTATATTCTATTAAATGTATTTACCTTCTAATAACTACAGAACCATGTGTCCACAAACTCAGATACAAAACTAAAAGTTCAACCTTGATTAGAAAATTGAAGAAAGAGCCACAAAAGAATTATCTCCAATGCTCCAACTTCTGAATTTTTCAACTTGGTTTTCTTTTCCTTTTTTGGGAAAAAATTGAGCTTTCATTGAGAAAGAATGAAAGAATGTACGAGGACTTACAAAAAACAAGGCCACAAAAAACAGTCCACCTTACTAACTACAGAAAATGACTCCAATTCAAGAGAATCAAACCACATTCATAATAGCAACCTCCCGGACCTCCTCCCACGATCTCTCTACTATTTTCTCAAGCCAAATCCCCCATAACTTAGCAAAGAAACAAGTGTACCACAAAACTTCATTTTTATCTCAAAACAGGGAATTAAGGAGCACCTCCTTAATCATAGCCTTGAACCTCTATCTTGAGCCAAACATAACCCAAACAAACTCAAGCATTTGTACCACAGATAACCTTGATTCTAATTTCTTATTAGCGAAAGATTATCCATCATCTTAAAGCCCCTTATTGGGAAGATTTTAAATTTAAGGAGCCCAGTAATTGTTTTATGATACTGATAGCAACAGCCAAAAAGGTAAGGAGGTGAAGAATCTTATTTGCTACTGCATTTCCTTGGATAGTTAATTGTGGATCCTTGAAATTACCTAATCAATTGGGGAACATTTTGTAATCTCCTCAATTTCTCTTTTAGTGGATTCTGAATCCTCCTTTGTACATCTTTCTAGGTTAATATACTGCATAAATAGTATGGATTGGAGTAGATTATAAGTAAAAAAACATACACAATACAGGTTGACATATTCTAGACCTAAGGAATAGAATAGGTCAACCATTTAGCTACTGTGACATGAAATATGTGTTGCTGGATTCAAATTATCTCTTCTAGCATTTTTGGGGACTAATGGCTAAAAAAAAACAAAAGGATAGTAAAAATATTTTGAATAGGAGAGTTTTGCAGCTTCTTTTTTAGCATAAAAAATAAACTAGGACTTTCAATGTATTCCTCTAGTTGATCTTCAAGAAAACACCTCGAGACCATCATTCACGTCTTAAAAATAAAGCAAAGTGATCTCATATTACTGCCATTCTAAGAACACGCTAAACACAGACCATCAGTAACACCAAGAATCTTAGTAATAAGCCCGTGTGGCGTGTATATAAAATAAAAGCTTATACTACGTACCACAAAACTTTTTCCCAATGGCGTGTCCATAAACTCATTGAGTTGCCTCCTATACTGCACAGACCAAGGGAAATAAGAGTGAGTGACGAGGGACGGCGCTAAGGTTAGAGAACAAAACAGTTGAGAAAATAACAAAATTCAACAGACATTTTAAAGATAAGAACACCCAATATTACAGACAACCAAGAAAAAGAGACATTATGGTTTTCATTCTACTTCCGTGAAAACTAGTAAATTATAAATATCTTGGATAAAAGGCACCAAGCATTGACACTCGGACTGACTGCTGATCTTAGAGAGGACTAATTAAGAACGATCCTACAGATAATTTCAAAACTTCACTTCCACAATCGACAATAACTAAGCAGGCCCTATCTACACAAATTCATTTCACAAGCACGAATACCAATCAATCCGCAGTACAAACCCTTGGCCAATTTCTGCTAAAATCCAATGTAAAATTACGCCAGCGCAATCCAATTCCAAACTCCCTATCAATCTCGCGCGCTCGGTCGGCCGCCGATTGAGCAACAGAACTAACACGGCGCGAGACAGAGTAACGCCTATCAAGGCTCTCCGCAGTTTTCCTCGCCTCGAATACGAATTTCTCGAAGCCATCGTTGGCGCCTCGCCACACTTTGTTCCAGGCCTCGCCAAAACCGTCGCTGTTGCCGCCGCCCCGACGGTATGCCTGAACGAAGCCAACAGTTCTCCGGAAAGGGATCATTGAGGGCCTACTCCTCCTCAATCTTAACGGAGCTTGAAGCGGTGGCTGCCATGGCGGCAGAGCTGTTGAAGCTATCATCACAAGTTGTATTTAACGTTGCTTGGATTTTCTCTTCTTCTACTACTTCAAGTTATAGCTTTTGCTAGAAGGTCTCTATCGTTCAGCCAGGCTCGCGTCTGCGGTCAGAATGTTTTTTGATTAAATATAAAACTTAAATCAATTATTTATTTATTTGATAAATCACACTTTTATTTTTGGTTTTGGAATTGGTGTAAAATTAGTTGAAGAATCAAATCCCAACATTTTAATTGAGGTTTTCAACTAATAAAAAATAAATCAAAATATTAATAAATATTTGTATTATTATATTTTACTATTATTTATAAATATCTTTAACAATTTTATTATTTAAAATAAATTTTCATTTTATTTTATTTTAGTTATATATCCTTTTAGAATTAAAAAAAATATATATATAATCGAAATAATAACATACTTTTAAAAAAATTATCGCTCTATCGAAATAGAAGAATGAGAAAAGTGAAAGTTATGTCAATTCATATGTATATGAAGTTTGATTTTACTCTCAAGCTTTGTTTTTTTGTGTAAATAGAGGATTGAACATTTAATCTTTCGAAATATAATTATATTAATTATTGTTGTGATAAATCCAATTTTCAATTATATTTGTTTGACTTGTCAACTTTAAAATTTATTAAATAAATTACAACTAAAGAGATACAGCAGAAGGATTAATAATATATTATGTATGAACATAGCTAAACATAATGGTTGTAATATCGACCTCTCAATTCCTCCATCCATATATTTTTCTTTATTTCTCCTCCATCCATATATTGTGAAATATATATATACATATTTGGGTGTGTAGCTTTAAAGAAGTACGTTGTTCGTGCAAGACCTAGAGGGAACAGAGGGGTTTGGGTGGTGCACTCTGGGGAATCCGATCCACCAAAATTTCCCGCCTTTCATCGTAACGTTACCTTACAACAGATCAATTTAAGTTATCGTCACTATCCGATTCGAGTTCCAGTCACCAGAGAGTTCTCGTATTCCGGCATTTCGGCCATCGGTGGCCGGCTGTGATTTCTCTGAAGTCTTGAACTTCAATTTCCAGCATTCTTTTTTGGGTTTCCTTTTTTCTTTTCTTTTTTTTCTTTTTTCAAGTCATGGATTCCTCCAAAGAAGAAGATGCTCCCGTTTTTCTTGATCGTTCTTCTCGGTTGACTAGAGGAAAGAGGTACCGGACTACTTGCCTAGCTTTTCTTTTCTTGGGGATGGATTTTGTTGTAAATTGGCAATGAACTGATGCAAGATGCTTCAAATTGTATGTATTTATGAATGGGGTATTTTTATTGGTTATAGGATGACCAAGTTGCTTGATGAGGAAGTTGAAGAAGACGAGTTGTTTTGGAATCAGGATGCTCTTAAAGAGGTATATTTAAATAGATTTAATCTTTTTTTCTTCTCTAGGGACGATATTAAGTTATAATCGCTTCGCTTGATGCTTTACTGTGGTTAATAGTAAAATTGTGATTACAACAATGCAATGTGTCCACTCAGTTATGGGGCTTGAGTTTTGATTAAATCAAGTATCCTGTTTGAACTTGTCCATCTTCAAAATACGCTGCAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGCTGATGAATTTGATAGTGATTTCAATGAAGATGTAAGTTATATTTCAGTTCCTTTTCACAACTTATTCTGTTCAACCATAAAATTATTTTCATAACATGACTACTTTTATGGACAGGAGTCTGAGCCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGGTTTTCTCTTATCTGAAATGCTTGGATGTTGGATTAGATGTATTTCAATTTTCTGTTTTAAAATTGAGTTTTCTTCCAGAACACAAACGAAGAAGCGACTAATATTTCCTGGAAAGAATTCTTCTAAGAACAAGAATAAAAAAAGAGTCATTTCCAAGATTGAGAAACCTTCCAAAGATGAAGCATCAACTGATCACTCTACGCCTCCTGAACATCATGATACACCGGATGATACTGAAGTTGAGAGAACAGTGAGGAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGGGATGCTATTCGTGCAGCTTTGCAAGCCACAATGAAGGTGAGTCCTGAATACTTGAGACATTTGATTTGTAGGATGAAGACAAAACCATTCTTCGTTAGAGTAGTTTGAGTTTTTCTTGAAGGCAGTTTCTTGATTGAATAGGGTGATGCTATGATGACGTGGAAACTACTATGGAATTTTACTCATTTTTTGTGCCATGTTAGAACATTCATTTCAATCTATAGGTCCATTCTGTGTTTAAGGGATGAGGTGAAATGAAAAGGGAGAAAAACCTGCAAAAAGAAAAAGAAAACGAAAAATACTAAACAGAATCTTCTGAGTTCTAATTAGTTTGTTTGGAATAACTTTGAATTTTATTGACACCCAATGATTGGCTCTCCATTTATATGGTTTTAGTGGTGTTTGAGTATATAAAAAGAACTTTTCGTTTTTTCTTTTGGGCTAGATAATGCATTCTCCTAAAGAAGTTATTGGACTAGTTTACACCCTACTCTTTCGATATATAACACTTCAGGTCCTAAGGTTTAGAACCTCTTCCCTTACCAAAGAAATATTTTTTAAGAGATAAGAACTGACACTGTATACAAGAGAAAGAAATCAGTACGGTTGATAAGACGTCCACCCTAAGCCAAAAGTGGTTAAAAGAGGCCCCCAATTTTGCTAAAGAAAAAAACTTCATGATTCAATAAGTTTAAATGGTGTGCACCATATGGAAGTGAGAAATCTTTCCTCTAATCCCAATCTTCTATATGCAGGCCTTAGCATCCATGTCAAAGGATTTCATGTGGTTCTAATTATTAATCGCACATTTTTTCCTGCTTTCTCAAAAAATTCCTTTCCTGCTACTTTTCCTGCAATGTTCAATATTATTCTTGGGTTTGCCATAAAATAATTTCCTCAAGATTTGAGTGAGACTGTATCCTTTCTTGTCCACCAGCCAATCAAGAGGAAAAATCCTGGTGAGGAGAAGAAGATGAGTCAAGAAGAAATGCTTCTTGAAGCTGCTCAAACAGGTGAAACTGATGGTTAATGTATGCTGTTGTAAGTTGCAACACTAGGTGGATACTTGAAGGAATCTTCTCATTTTCTCTTGAATTATTTCAACCTTCCATATCCAAGAAATCATGAACTTGAGGAATTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTCAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCACGGATACGATACTTGTCAAGAAATGGTACCATCTGAAGTGTGATTCAAAATTGTGTTCTTTCAGAAAAGAACTTGTCCATGTTCGGAATTAAGTTATATCGGTGTATTTTGTTGCAGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCGAATCAGTTCCATGTAATTAATTACTTATATATAATCATCCACCCAATATCATTTCGAATATGAAATTTTCATTGAATTAATAAAAGGAGACTAATGCTCAAAAGGCATAAACCTCAAAAGAGAGATAAAAGGAAAATGCAAGGCATGATTAATGAAAGATGGCAAAAATTAATGAAAGATAAAGACTTCCTAATTCATACAAATTTCTTGCAAACAAAAGAAAAAAATGATTTAGCAAGAGAACACCATCAAGAAGTTTTACACTACCTGTCTTGAAACGACTGTACCAATGCTCCTAAAAGTTCTCAAAACTTTTTTGATACAAATTTTTTAGGTAACAGCCTTCATTGCATATTTTAGTTTACAATGATGAACCCTTAAGCATTGTTAGCTCAGCAATATTTTCCCGCGTCCTGCTTCCTTGTGTTTACAGGGTCTTTTTCATTCTATCAAATGTGTTTTCTGTCAAAAAGAAAAAGAATACGGATCTTTTTCTGACCAGGACCTTGTCCCTAAATTTGAGTGTCTTCTCGTCAACTCCTTTGGTTTCTCACTTTCGGTAACTTCTCAAATTTTCAATGAAGAGTAAGACTTCTCATGAGAAACATTGTTCTTTCCCCTCTTATAAAGTCTAAATAGGACGAGTTAAAAACAAATGGATCAGATTTAGTTCTGAGAGCTAATGTCCCTTGTAATGTGTCTATAAGGTATCAAATTCATTCCATTAAGTTTTTAGTTTTTCTCTTCCTCTTCCTTTGTATTTGAAGAATATGTTAGGTTCTGATCTTACCTTGATCTGTATTCAGTTATGAATACAATTATTCATTTCTTATCCCAGGAAAAGTAAATGAAACATGGAGAGAATCTTGTATGCTATTTTGCACTGTAAGTTGTCCTTTTATTTTTTTAAGTTAAGAACCTAAAAATATTTCTCTTCCCTTTTTCTTTCTAGATCCAGAGAAAGCTGTATGTGTGGTTACAGGTTTGCCTGCGAGGTAAGATCTCATTGCCATTTGTTTCTTCGCAGTTTGTCAGCTTAGTTCATGGTCCAATTCCTTGAAATTTACTTCATGATGGAAAAATGATAGATTCTGTGGTTCTAAATAGATCAGAAGAGGTTTTATCGTTGTTATTTACTTATTTTAAATAGTAAAGTGCATGAACAGGTGCCATCCTCGGAGCTTTAAACACAGAGTAGGAAAAAGTTACCTTATGCGACTAAAGGAACTTTTAATTCTCTAGGATATTGCTCCTAAGAACAGTAATTACGTAGGCTATCAAAAAGTGAACAATTCTGCAGTGTAATTAATGCTTTTTATGCTGAAGGTATCGTGACCCAAAAACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGGTATAGTTCTTCTTGCTTATTTTTGGGTTTTGATTTACTCATTATATTATAGCTTTGTTTGTATACTTCTCACTTCACTTCACTTCATTTTCTTTAAGTTTCTTTATTTCTGCATTAAAATAGTTTCTTCACTGTATTATATGTCAATATTGTGTATAAACAAGACATGAAAATGTTGGTTGGAGGGGTGACTGATGATAAAAGTTCAGAGAAAAATCAATTAATTCATTTTTGCCTGCGACATCTTAACTTTCATTCTGATGTCATTGGAATGGTCAAACAATTTAATTAATTTCTCAAAGTTTATGTACATCCAGGGTCCAGGAAGCCTAGCCTTCATTAGGGGAGGCTTTCGCTTTGAGAATAAGGCTAGACTACAAAAAATACTCAAGTACTTAAAACGGCAGCTCATTAACTTACTAAGAAACTAACTAATAAACCAATTTGACTGACAGATTAAACAAAATTACAAGTAGTTTACAACCGTACTGTTAATGAGCCTACATCAATTCTCTTTCTCATAAGAAAACTCGAGTTTCCAATCAGGCTCATGAAGAGGGTAATAAGTGGCCGAAGGGAAAAAACAGTATGGACATTTGTGATATTGGAATTAGTTCAATGACCGAAACATAAAGTTCCACTCTTTTGAGTTCCCAGATCGGCCCAATCATTCTCTTATTAGAGCATGGAACCTATTTTAATATAGATGGTAATTCAGAGTCTTGGTAATGGGGAACCTGTATCTTCTAAAGGTGTCTTTGTGGTCATCGTAATTTAGAGGTTAATATTATGAAAAGGCTGAAAGAGTAGCTCAACTCTTTCAATTATCTGCACTGAATTGTAAGGAAGATGTTCTTTAAGGCTCCTGCTTTACTTGATTACCCCAAATTGATCATTTTATTTTATCCTTCCATGAGTCCAGTATCTCACTAATTGCTGATGTGATGCAGTTTTGCGGATGATGGTAAGGGAGCCAAGGAAATGGACATGGGATATTTATTTGCTTCACTTTCTGGTAATGGGTTCTCAAGAAGGCGGAAGAGATCAACACCTCAAAATAAAAATGAAATGTCCTACTTGCGCCACTTTTCACGTTTTCGCCAAATTCCAGCATTTGATTCTGAACTTTCTGATTAGTTTTTCAAGGTACTTTAGTAAATTCCCTTATGGCCAAACTTTTCTATGCATATTCTGCCATTCCATGTTCACGAACCAGTTTCATTATTATTTCGAATAATCACAGTTTATTGTTCGGGATGGTACTGGAAGGGGAGAGGATACAGTATTTTGATTTCAACACTGGAATAGCCATGATCTTAGAAGACATCGACTTTGGTTACCTTAGAAACCAGAACATAGAACCGAATTTTCTTACTCCTTAGGCTTCATGTCAAGAGAATTTCAGAAACCTAATGCCTCAGTTTTGTGGGGTCTTTCTGTTCATCTTTAGTCGTCGACCCTTGTTCTGCTACCATTGCAAGGCAGGTTTCTAGCCATCTCTTGGATGATATGTTCTTGACAGAGCTTTCAAATGTGTTCTCGATAATCAGTAGTTTCGGGGCAAATTGTTGTGCCACAGCCATTCTTGAGGAATGA

mRNA sequence

TGAACAAATTTACAACTTGCAGCTTCTTGCTTAGCAATAATTAATAAATAATAATTCATCATGAACTATCACAGAATTGAAACACCATAAACATATCACTGCCTCTGCTTAGTAACATTTGTTACAAGATTGAAACAAAGAAATCCCAAAGAAAAGAACATTTTTATAGCTGGAAAATAAGTGAGGACAATATATATTGAGTACCTTAACAATCCAACACCTAAGGAATTCCCCTTTATGCACCATATCTGTATTGATACTACAAACAAATGCTGCCAAACTACATTAGTAACCATCCAAGGGAGAAGAGAACACAAACAGTATCGTAATTGAACACAGAACCCCGACGAGTTCAATCTGTGGTCCTGGGTAACTCTTTCTTCATTGTGGTTTTGTGTACTCTCAATAAAGGTCGAGTGAATCGCCATCCCTTCCAGCCTTACTATTTCTCCTCAAACTCCACATCAATGACATTGGGTTGTGACTTGGAACTAGAACTACCTTTTCTTGAATTGTATTCCCCTTGGCCTTTAGGCTGCCACACTATGTTTCCACAGCCTGTGCATGAAATAATTTGGTTCTTGTACCCAGCAAATTCTCTATTACAGGCTGGACAAGTACCCTTTATTACAAGGCTATTGGCAAAAGTCCCAATGAGTAGTGGACCAGCAAACGGTAGTATCCACGTCGCAAATATCAAGAATCGGAAAAGCCATCCAGACAGTGCAAACCAAAGGAAGAATATTGTCACAAAACTTTTTCCCAATGGCGTGTCCATAAACTCATTGAGTTGCCTCCTATACCTTGGCCAATTTCTGCTAAAATCCAATGTAAAATTACGCCAGCGCAATCCAATTCCAAACTCCCTATCAATCTCGCGCGCTCGGTCGGCCGCCGATTGAGCAACAGAACTAACACGGCGCGAGACAGAGTAACGCCTATCAAGGCTCTCCGCAGTTTTCCTCGCCTCGAATACGAATTTCTCGAAGCCATCGTTGGCGCCTCGCCACACTTTGTTCCAGGCCTCGCCAAAACCGTCGCTGTTGCCGCCGCCCCGACGGTATGCCTGAACGAAGCCAACAGTTCTCCGGAAAGGGATCATTGAGGGCCTACTCCTCCTCAATCTTAACGGAGCTTGAAGCGGTGGCTGCCATGGCGGCAGAGCTGTTGAAGCTATCATCACAAGTTGTATTTAACGTTGCTTGGATTTTCTCTTCTTCTACTACTTCAAGTTATAGCTTTTGCTAGAAGGTCTCTATCGTTCAGCCAGGCTCGCGTCTGCGCTTTAAAGAAGTACGTTGTTCGTGCAAGACCTAGAGGGAACAGAGGGGTTTGGGTGGTGCACTCTGGGGAATCCGATCCACCAAAATTTCCCGCCTTTCATCGTAACGTTACCTTACAACAGATCAATTTAAGTTATCGTCACTATCCGATTCGAGTTCCAGTCACCAGAGAGTTCTCGTATTCCGGCATTTCGGCCATCGGTGGCCGGCTGTGATTTCTCTGAAGTCTTGAACTTCAATTTCCAGCATTCTTTTTTGGGTTTCCTTTTTTCTTTTCTTTTTTTTCTTTTTTCAAGTCATGGATTCCTCCAAAGAAGAAGATGCTCCCGTTTTTCTTGATCGTTCTTCTCGGTTGACTAGAGGAAAGAGGATGACCAAGTTGCTTGATGAGGAAGTTGAAGAAGACGAGTTGTTTTGGAATCAGGATGCTCTTAAAGAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGCTGATGAATTTGATAGTGATTTCAATGAAGATGAGTCTGAGCCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGAACACAAACGAAGAAGCGACTAATATTTCCTGGAAAGAATTCTTCTAAGAACAAGAATAAAAAAAGAGTCATTTCCAAGATTGAGAAACCTTCCAAAGATGAAGCATCAACTGATCACTCTACGCCTCCTGAACATCATGATACACCGGATGATACTGAAGTTGAGAGAACAGTGAGGAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGGGATGCTATTCGTGCAGCTTTGCAAGCCACAATGAAGCCAATCAAGAGGAAAAATCCTGGTGAGGAGAAGAAGATGAGTCAAGAAGAAATGCTTCTTGAAGCTGCTCAAACAGAAATCATGAACTTGAGGAATTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTCAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCACGGATACGATACTTGTCAAGAAATGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCGAATCAGACGAGTTAAAAACAAATGGATCAGATTTAGTTCTGAGAGCTAATGTCCCTTGTAATGTGTCTATAAGTTATGAATACAATTATTCATTTCTTATCCCAGGAAAAGTAAATGAAACATGGAGAGAATCTTATCCAGAGAAAGCTGTATGTGTGGTTACAGGTTTGCCTGCGAGGTATCGTGACCCAAAAACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGTTTTGCGGATGATGGTAAGGGAGCCAAGGAAATGGACATGGGATATTTATTTGCTTCACTTTCTGGTACTTTAGTAAATTCCCTTATGGCCAAACTTTTCTATGCATATTCTGCCATTCCATGTTCACGAACCAGTTTCATTATTATTTCGAATAATCACAGTTTATTGTTCGGGATGGTACTGGAAGGGGAGAGGATACAGTATTTTGATTTCAACACTGGAATAGCCATGATCTTAGAAGACATCGACTTTGTCGTCGACCCTTGTTCTGCTACCATTGCAAGGCAGGTTTCTAGCCATCTCTTGGATGATATGTTCTTGACAGAGCTTTCAAATGTGTTCTCGATAATCAGTAGTTTCGGGGCAAATTGTTGTGCCACAGCCATTCTTGAGGAATGA

Coding sequence (CDS)

ATGGATTCCTCCAAAGAAGAAGATGCTCCCGTTTTTCTTGATCGTTCTTCTCGGTTGACTAGAGGAAAGAGGATGACCAAGTTGCTTGATGAGGAAGTTGAAGAAGACGAGTTGTTTTGGAATCAGGATGCTCTTAAAGAGGATGAGGTTGATGACGAATATGAAGAAGAACCTGAGGTTGCTGATGAATTTGATAGTGATTTCAATGAAGATGAGTCTGAGCCAGAGGAAGAAGCTGAGAATGAAGCAGATGAGAGAACACAAACGAAGAAGCGACTAATATTTCCTGGAAAGAATTCTTCTAAGAACAAGAATAAAAAAAGAGTCATTTCCAAGATTGAGAAACCTTCCAAAGATGAAGCATCAACTGATCACTCTACGCCTCCTGAACATCATGATACACCGGATGATACTGAAGTTGAGAGAACAGTGAGGAAATCCACTAGAACTTCAGTTATTGTTAGGCAAGCTGAGAGGGATGCTATTCGTGCAGCTTTGCAAGCCACAATGAAGCCAATCAAGAGGAAAAATCCTGGTGAGGAGAAGAAGATGAGTCAAGAAGAAATGCTTCTTGAAGCTGCTCAAACAGAAATCATGAACTTGAGGAATTTGGAGCGTGTTTTGGCAAGGGAAGAAGAAGTCAAAAAGAGAGCAATTGTGCATAAAGCTGTGTACAATGGTCCACGGATACGATACTTGTCAAGAAATGGTTGCTCATATCTAGAGTTTAGTAAAGGGTCATCGTTTCAGGCAGAGCTTTCAACCGAATCAGACGAGTTAAAAACAAATGGATCAGATTTAGTTCTGAGAGCTAATGTCCCTTGTAATGTGTCTATAAGTTATGAATACAATTATTCATTTCTTATCCCAGGAAAAGTAAATGAAACATGGAGAGAATCTTATCCAGAGAAAGCTGTATGTGTGGTTACAGGTTTGCCTGCGAGGTATCGTGACCCAAAAACAGGGTTGCCTTATGCAACTAAAGAAGCTTTCAAGACAATCCGTGAACGTTTTGCGGATGATGGTAAGGGAGCCAAGGAAATGGACATGGGATATTTATTTGCTTCACTTTCTGGTACTTTAGTAAATTCCCTTATGGCCAAACTTTTCTATGCATATTCTGCCATTCCATGTTCACGAACCAGTTTCATTATTATTTCGAATAATCACAGTTTATTGTTCGGGATGGTACTGGAAGGGGAGAGGATACAGTATTTTGATTTCAACACTGGAATAGCCATGATCTTAGAAGACATCGACTTTGTCGTCGACCCTTGTTCTGCTACCATTGCAAGGCAGGTTTCTAGCCATCTCTTGGATGATATGTTCTTGACAGAGCTTTCAAATGTGTTCTCGATAATCAGTAGTTTCGGGGCAAATTGTTGTGCCACAGCCATTCTTGAGGAATGA

Protein sequence

MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEVADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSYLEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRESYPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSGTLVNSLMAKLFYAYSAIPCSRTSFIIISNNHSLLFGMVLEGERIQYFDFNTGIAMILEDIDFVVDPCSATIARQVSSHLLDDMFLTELSNVFSIISSFGANCCATAILEE

Homology

[Close]

BLAST of ClCG01G004860 vs. NCBI nr
Match: XP_038907261.1 (SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907262.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907263.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907264.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907265.1 SWR1 complex subunit 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 551.2 bits (1419), Expect = 8.6e-153
Identity = 310/359 (86.35%), Postives = 313/359 (87.19%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGK SSKNKNKKRV+SK+EKPSKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTSSKNKNKKRVVSKVEKPSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY
Sbjct: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGLPARYRDPKTGLPYATKEAFKTIRERFADD   AKEMDMGYLFASLSG
Sbjct: 301 YPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERFADDSMVAKEMDMGYLFASLSG 318

[Close]

BLAST of ClCG01G004860 vs. NCBI nr
Match: XP_022970136.1 (SWR1 complex subunit 2 [Cucurbita maxima] >XP_022970137.1 SWR1 complex subunit 2 [Cucurbita maxima])

HSP 1 Score: 537.0 bits (1382), Expect = 1.7e-148
Identity = 303/359 (84.40%), Postives = 310/359 (86.35%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEEDA VFLDRSSRLTRGKRMTKLLD+E+EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGK  SKNKNKKRV+SKIEK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGLPARYRDPKTGLPYATKEAFKTIRERFADDG GAKEMDMGYLFA+LSG
Sbjct: 301 YPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERFADDGMGAKEMDMGYLFATLSG 318

[Close]

BLAST of ClCG01G004860 vs. NCBI nr
Match: XP_023550830.1 (SWR1 complex subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 536.6 bits (1381), Expect = 2.2e-148
Identity = 303/359 (84.40%), Postives = 310/359 (86.35%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEEDA VFLDRSSRLTRGKRMTKLLD+E+EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGK  SKNKNKKRV+SKIEK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGLPARYRDPKTGLPYATKEAFK+IRERFADDG GAKEMDMGYLFASLSG
Sbjct: 301 YPEKAVCVITGLPARYRDPKTGLPYATKEAFKSIRERFADDGMGAKEMDMGYLFASLSG 318

[Close]

BLAST of ClCG01G004860 vs. NCBI nr
Match: KAG6579641.1 (SWR1 complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 536.6 bits (1381), Expect = 2.2e-148
Identity = 303/359 (84.40%), Postives = 309/359 (86.07%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEEDA VFLDRSSRLTRGKRMTKLLD+E+EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGK  SKNKNKKRV+SKIEK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGLPARYRDPKTGLPYATKEAFKTIRERFADDG GAKEMDMGYLF SLSG
Sbjct: 301 YPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERFADDGMGAKEMDMGYLFTSLSG 318

[Close]

BLAST of ClCG01G004860 vs. NCBI nr
Match: XP_022928918.1 (SWR1 complex subunit 2 [Cucurbita moschata] >XP_022928919.1 SWR1 complex subunit 2 [Cucurbita moschata])

HSP 1 Score: 534.6 bits (1376), Expect = 8.3e-148
Identity = 303/359 (84.40%), Postives = 309/359 (86.07%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEEDA VFLDRSSRLTRGKRMTKLLD+E+EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGK  SKNKNKKRV+SKIEK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGL ARYRDPKTGLPYATKEAFKTIRERFADDG GAKEMDMGYLFASLSG
Sbjct: 301 YPEKAVCVITGLRARYRDPKTGLPYATKEAFKTIRERFADDGMGAKEMDMGYLFASLSG 318

[Close]

BLAST of ClCG01G004860 vs. ExPASy Swiss-Prot
Match: F4IP06 (SWR1 complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SWC2 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 9.1e-97
Identity = 226/394 (57.36%), Postives = 274/394 (69.54%), Query Frame = 0


Query: 6   EEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEVADEFD 65
           EE+  VFLDR++R TRGKRMTKLLD+EVEEDE FWNQ+ALKE+E DDEYE E EVADEFD
Sbjct: 5   EEEPMVFLDRTTRATRGKRMTKLLDDEVEEDEQFWNQEALKEEEHDDEYEAEREVADEFD 64

Query: 66  SDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKK-RVISKI------EKPSK 125
           SDFN+DE EP+  A NE + R   KKRLI+PGK +SK K KK +V+S++      EKP  
Sbjct: 65  SDFNDDEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPG- 124

Query: 126 DEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNP 185
           +E         E ++  +D E E+ +RKSTRTSV+VRQAERDA+RAA+QAT KPI+RK  
Sbjct: 125 EELGNKEQEEKEENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPIQRKKV 184

Query: 186 GEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGC 245
           GEEK+M+QEEMLLEAAQTEIMNLRNLERVLAREEEVKK+AIVHKAVY GP+IRY S++GC
Sbjct: 185 GEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKKAIVHKAVYKGPQIRYHSKDGC 244

Query: 246 SYLEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWR 305
           +YLEF  G+SF +ELST+S               VP                        
Sbjct: 245 NYLEFCNGASFNSELSTKS---------------VP------------------------ 304

Query: 306 ESYPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKG-AKEMDMGYLFASL 365
             YPEKAVCV+TGLPA+YRDPKTGLPYAT++AFK IRERF D+  G  K+M+MG LF   
Sbjct: 305 --YPEKAVCVITGLPAKYRDPKTGLPYATRDAFKAIRERFMDEHDGLRKKMEMGDLF--- 348

Query: 366 SGTLVNSLMAKLF---YAYSAIPCSRTSFIIISN 389
                ++L+AK F      + IP S  SF + S+
Sbjct: 365 -----DTLVAKGFATKQKRTKIPKSNKSFSLRSS 348

[Close]

BLAST of ClCG01G004860 vs. ExPASy Swiss-Prot
Match: Q9VKM6 (Vacuolar protein sorting-associated protein 72 homolog OS=Drosophila melanogaster OX=7227 GN=YL-1 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-11
Identity = 101/337 (29.97%), Postives = 151/337 (44.81%), Query Frame = 0


Query: 15  RSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEVADEFDSDFNEDESE 74
           RS R   G ++  LL+EE E+D    +    +EDE D EYE++ E  D  DSDF+ DE++
Sbjct: 5   RSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYEQKDEEEDVVDSDFSIDEND 64

Query: 75  PEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDEASTDHSTPPEHHDT 134
                + EA E+   +KR +    N+   K  K  + K  K          +TP  H   
Sbjct: 65  EPVSDQEEAPEK--KRKRGVV---NTKAYKETKPAVKKETK----------ATPALHKKR 124

Query: 135 PDDTEVER----------TVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKM 194
           P     +R          + RKS RTS  ++          L    K  K+K   E+   
Sbjct: 125 PGGGVTKRRPRPRFTVLDSGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMP 184

Query: 195 SQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSYLEFS 254
           +QEE+L EA  TE  N ++LE+    E E KK++   K  ++GP IRY S    +  + +
Sbjct: 185 TQEELLEEAKITEEENTKSLEKFQKMELE-KKKSRPTKRTFSGPTIRYHSLTMPAMRKPT 244

Query: 255 KGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRESYPEK 314
           +G    A  + +S +L                V+I  ++N            +R   P K
Sbjct: 245 RG----ANPAVDSKDLAGKCERTF--------VTIENDFNDKVF-----QSLFRHKAPPK 304

Query: 315 A---VCVVTGLPARYRDPKTGLPYATKEAFKTIRERF 339
           A   +C +T LPARY DP T  PY + +AFK +RE +
Sbjct: 305 ASNGICPITRLPARYFDPITQQPYYSIQAFKILREAY 308

[Close]

BLAST of ClCG01G004860 vs. ExPASy Swiss-Prot
Match: Q5E9F6 (Vacuolar protein sorting-associated protein 72 homolog OS=Bos taurus OX=9913 GN=VPS72 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-10
Identity = 98/338 (28.99%), Postives = 154/338 (45.56%), Query Frame = 0


Query: 15  RSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYE-EEPEVADEFDSDFNEDES 74
           R+ R T G R++ LL++E E++          E+  DDEY+ ++ +  DE DSDF+ DE 
Sbjct: 7   RAPRKTAGNRLSGLLEKEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEG 66

Query: 75  EPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDEASTDHSTPPEHHD 134
           + E  ++ EA+E  + K+R++           + R +S     S+         P E  D
Sbjct: 67  D-EPSSDGEAEE-PRRKRRVVTKAYKEPLKSLRPRKVSTPAGSSQKTREEKALLPLELQD 126

Query: 135 TPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEA 194
             D T+  +++R+ST       +  R       +   +  +RK P  E+ ++QEE+L EA
Sbjct: 127 --DGTDSRKSMRQST------AEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREA 186

Query: 195 AQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSYLEFSKGSSFQAEL 254
             TE +NLR+LE    R E  KK+ +  K    GP I Y   +  +     +    +  +
Sbjct: 187 KITEELNLRSLE-TYERLEADKKKQVHKKRKCPGPIITY---HSVTVPLVGEPGPKEENV 246

Query: 255 STESDELKTNGSDLVLRANV-----PCNVSISYEYNYSFLIPGKVNETWRESYPE----- 314
             E  +     S L  RA       P   S ++       I    + T+ E +P+     
Sbjct: 247 DVEGLDPAPMASALAARAGTGPVIPPARCSRTF-------ITFSDDATFEEWFPQGRTPK 306

Query: 315 ---KAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERF 339
              + VC VT  PA YRDP T +PYAT  AFK IRE +
Sbjct: 307 IPVREVCPVTHRPALYRDPVTDIPYATARAFKIIREAY 323

[Close]

BLAST of ClCG01G004860 vs. ExPASy Swiss-Prot
Match: Q5R5V9 (Vacuolar protein sorting-associated protein 72 homolog OS=Pongo abelii OX=9601 GN=VPS72 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.8e-10
Identity = 97/331 (29.31%), Postives = 144/331 (43.50%), Query Frame = 0


Query: 15  RSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYE-EEPEVADEFDSDFNEDES 74
           R+ R T G R++ LL+ E E++          E+  DDEY+ ++ +  DE DSDF+ DE 
Sbjct: 7   RAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEG 66

Query: 75  EPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDEASTDHSTPPEHHD 134
           + E  ++ EA+E  + K+R++           + R +S     S+         P E  D
Sbjct: 67  D-EPSSDGEAEE-PRRKRRVVTKAYKEPLKSLRPRKVSTPAGSSQKAREEKALLPLELQD 126

Query: 135 TPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEA 194
              D+      RKS R S    +  R       +   +  +RK P  E+ ++QEE+L EA
Sbjct: 127 DGSDS------RKSMRQS--TAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREA 186

Query: 195 AQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSYLEFSKGSSFQAEL 254
             TE +NLR+LE    R E  KK+ +  K    GP I Y   +  +     +    +  +
Sbjct: 187 KITEELNLRSLE-TYERLEADKKKQVHKKRKCPGPIITY---HSVTVPLVGEPGPKEENV 246

Query: 255 STESDELKTNGSDLVLRANV-PCNVSISYEYNYSFLIPGKVNETW-----RESYPEKAVC 314
             E  +   + S L   A   P N        +         E W         P + VC
Sbjct: 247 DIEGLDPAPSASALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVC 306

Query: 315 VVTGLPARYRDPKTGLPYATKEAFKTIRERF 339
            VT  PA YRDP T +PYAT  AFK IRE +
Sbjct: 307 PVTHRPALYRDPVTDIPYATARAFKIIREAY 323

[Close]

BLAST of ClCG01G004860 vs. ExPASy Swiss-Prot
Match: Q15906 (Vacuolar protein sorting-associated protein 72 homolog OS=Homo sapiens OX=9606 GN=VPS72 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-09
Identity = 96/331 (29.00%), Postives = 144/331 (43.50%), Query Frame = 0


Query: 15  RSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYE-EEPEVADEFDSDFNEDES 74
           R+ R T G R++ LL+ E E++          E+  DDEY+ ++ +  DE DSDF+ DE 
Sbjct: 7   RAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEG 66

Query: 75  EPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDEASTDHSTPPEHHD 134
           + E  ++ EA+E  + K+R++           + R ++     S+         P E  D
Sbjct: 67  D-EPSSDGEAEE-PRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLELQD 126

Query: 135 TPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGEEKKMSQEEMLLEA 194
              D+      RKS R S    +  R       +   +  +RK P  E+ ++QEE+L EA
Sbjct: 127 DGSDS------RKSMRQS--TAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREA 186

Query: 195 AQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSYLEFSKGSSFQAEL 254
             TE +NLR+LE    R E  KK+ +  K    GP I Y   +  +     +    +  +
Sbjct: 187 KITEELNLRSLE-TYERLEADKKKQVHKKRKCPGPIITY---HSVTVPLVGEPGPKEENV 246

Query: 255 STESDELKTNGSDLVLRANV-PCNVSISYEYNYSFLIPGKVNETW-----RESYPEKAVC 314
             E  +   + S L   A   P N        +         E W         P + VC
Sbjct: 247 DIEGLDPAPSVSALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVC 306

Query: 315 VVTGLPARYRDPKTGLPYATKEAFKTIRERF 339
            VT  PA YRDP T +PYAT  AFK IRE +
Sbjct: 307 PVTHRPALYRDPVTDIPYATARAFKIIREAY 323

[Close]

BLAST of ClCG01G004860 vs. ExPASy TrEMBL
Match: A0A6J1HZS7 (SWR1 complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111469126 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 8.1e-149
Identity = 303/359 (84.40%), Postives = 310/359 (86.35%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEEDA VFLDRSSRLTRGKRMTKLLD+E+EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGK  SKNKNKKRV+SKIEK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGLPARYRDPKTGLPYATKEAFKTIRERFADDG GAKEMDMGYLFA+LSG
Sbjct: 301 YPEKAVCVITGLPARYRDPKTGLPYATKEAFKTIRERFADDGMGAKEMDMGYLFATLSG 318

[Close]

BLAST of ClCG01G004860 vs. ExPASy TrEMBL
Match: A0A6J1EM84 (SWR1 complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111435683 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 4.0e-148
Identity = 303/359 (84.40%), Postives = 309/359 (86.07%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEEDA VFLDRSSRLTRGKRMTKLLD+E+EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDASVFLDRSSRLTRGKRMTKLLDDELEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGK  SKNKNKKRV+SKIEK SKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKTPSKNKNKKRVVSKIEKSSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQE+MLLEAAQTEIMNLRNLERVLAREEEVKKRAIV KAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEDMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVQKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGL ARYRDPKTGLPYATKEAFKTIRERFADDG GAKEMDMGYLFASLSG
Sbjct: 301 YPEKAVCVITGLRARYRDPKTGLPYATKEAFKTIRERFADDGMGAKEMDMGYLFASLSG 318

[Close]

BLAST of ClCG01G004860 vs. ExPASy TrEMBL
Match: A0A5A7UJC3 (SWR1 complex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00240 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.5e-147
Identity = 302/360 (83.89%), Postives = 308/360 (85.56%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEED PVFLDRSSRLTRGKRMTKLLDEE EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDVPVFLDRSSRLTRGKRMTKLLDEEAEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEA+ERTQ KKRLIFPGK +SKNKNKKR +SKIEKPSKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGK-TSKNKNKKRAVSKIEKPSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRI YLSRNGCSY
Sbjct: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRICYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSGT 360
           YPEKA CV+TGLPARYRDPKTGLPYATKEAFKTIRERFADD   AK+MDMGYLFASLSG+
Sbjct: 301 YPEKAACVITGLPARYRDPKTGLPYATKEAFKTIRERFADDSSVAKQMDMGYLFASLSGS 318

[Close]

BLAST of ClCG01G004860 vs. ExPASy TrEMBL
Match: A0A1S3CUJ8 (SWR1 complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103504701 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 3.4e-147
Identity = 301/360 (83.61%), Postives = 308/360 (85.56%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKE+D PVFLDRSSRLTRGKRMTKLLDEE EEDELFWNQDALKEDEVDDEYEEEPEV
Sbjct: 1   MDSSKEDDVPVFLDRSSRLTRGKRMTKLLDEEAEEDELFWNQDALKEDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
           ADEFDSDFNEDESEPEEEAENEA+ERTQ KKRLIFPGK +SKNKNKKR +SKIEKPSKDE
Sbjct: 61  ADEFDSDFNEDESEPEEEAENEAEERTQMKKRLIFPGK-TSKNKNKKRAVSKIEKPSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRI YLSRNGCSY
Sbjct: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRICYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSGT 360
           YPEKA CV+TGLPARYRDPKTGLPYATKEAFKTIRERFADD   AK+MDMGYLFASLSG+
Sbjct: 301 YPEKAACVITGLPARYRDPKTGLPYATKEAFKTIRERFADDSSVAKQMDMGYLFASLSGS 318

[Close]

BLAST of ClCG01G004860 vs. ExPASy TrEMBL
Match: A0A0A0KN54 (YL1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G168770 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 9.3e-145
Identity = 297/359 (82.73%), Postives = 305/359 (84.96%), Query Frame = 0


Query: 1   MDSSKEEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEV 60
           MDSSKEED PVFLDRSSR+TRGKRMTKLLDEE EEDELFWNQDAL+EDEVDDEYEEEPEV
Sbjct: 1   MDSSKEEDVPVFLDRSSRMTRGKRMTKLLDEEAEEDELFWNQDALREDEVDDEYEEEPEV 60

Query: 61  ADEFDSDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKKRVISKIEKPSKDE 120
            DEFDSDFNEDESEPEEEAENEADER Q KKRLIFPGK +SKNKNKKR +SK+EKPSKDE
Sbjct: 61  VDEFDSDFNEDESEPEEEAENEADERPQMKKRLIFPGK-TSKNKNKKRAVSKVEKPSKDE 120

Query: 121 ASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180
           ASTD STPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE
Sbjct: 121 ASTDQSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNPGE 180

Query: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGCSY 240
           EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRI+YLSRNGCSY
Sbjct: 181 EKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIQYLSRNGCSY 240

Query: 241 LEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWRES 300
           LEFSKGSSFQAELST S               VP                          
Sbjct: 241 LEFSKGSSFQAELSTTS---------------VP-------------------------- 300

Query: 301 YPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKGAKEMDMGYLFASLSG 360
           YPEKAVCV+TGLPA+YRDPKTGLPYATKEAFKTIRERFADD   AKEMDMG LFASLSG
Sbjct: 301 YPEKAVCVITGLPAKYRDPKTGLPYATKEAFKTIRERFADDSTVAKEMDMGELFASLSG 317

[Close]

BLAST of ClCG01G004860 vs. TAIR 10
Match: AT2G36740.1 (sequence-specific DNA binding transcription factors;DNA binding;DNA binding )

HSP 1 Score: 355.5 bits (911), Expect = 6.4e-98
Identity = 226/394 (57.36%), Postives = 274/394 (69.54%), Query Frame = 0


Query: 6   EEDAPVFLDRSSRLTRGKRMTKLLDEEVEEDELFWNQDALKEDEVDDEYEEEPEVADEFD 65
           EE+  VFLDR++R TRGKRMTKLLD+EVEEDE FWNQ+ALKE+E DDEYE E EVADEFD
Sbjct: 5   EEEPMVFLDRTTRATRGKRMTKLLDDEVEEDEQFWNQEALKEEEHDDEYEAEREVADEFD 64

Query: 66  SDFNEDESEPEEEAENEADERTQTKKRLIFPGKNSSKNKNKK-RVISKI------EKPSK 125
           SDFN+DE EP+  A NE + R   KKRLI+PGK +SK K KK +V+S++      EKP  
Sbjct: 65  SDFNDDEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPG- 124

Query: 126 DEASTDHSTPPEHHDTPDDTEVERTVRKSTRTSVIVRQAERDAIRAALQATMKPIKRKNP 185
           +E         E ++  +D E E+ +RKSTRTSV+VRQAERDA+RAA+QAT KPI+RK  
Sbjct: 125 EELGNKEQEEKEENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPIQRKKV 184

Query: 186 GEEKKMSQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYNGPRIRYLSRNGC 245
           GEEK+M+QEEMLLEAAQTEIMNLRNLERVLAREEEVKK+AIVHKAVY GP+IRY S++GC
Sbjct: 185 GEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKKAIVHKAVYKGPQIRYHSKDGC 244

Query: 246 SYLEFSKGSSFQAELSTESDELKTNGSDLVLRANVPCNVSISYEYNYSFLIPGKVNETWR 305
           +YLEF  G+SF +ELST+S               VP                        
Sbjct: 245 NYLEFCNGASFNSELSTKS---------------VP------------------------ 304

Query: 306 ESYPEKAVCVVTGLPARYRDPKTGLPYATKEAFKTIRERFADDGKG-AKEMDMGYLFASL 365
             YPEKAVCV+TGLPA+YRDPKTGLPYAT++AFK IRERF D+  G  K+M+MG LF   
Sbjct: 305 --YPEKAVCVITGLPAKYRDPKTGLPYATRDAFKAIRERFMDEHDGLRKKMEMGDLF--- 348

Query: 366 SGTLVNSLMAKLF---YAYSAIPCSRTSFIIISN 389
                ++L+AK F      + IP S  SF + S+
Sbjct: 365 -----DTLVAKGFATKQKRTKIPKSNKSFSLRSS 348

The following BLAST results are available for this feature:

BLAST of ClCG01G004860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907261.1	8.6e-153	86.35	SWR1 complex subunit 2 isoform X1 [Benincasa hispida] >XP_038907262.1 SWR1 compl...	[more]
XP_022970136.1	1.7e-148	84.40	SWR1 complex subunit 2 [Cucurbita maxima] >XP_022970137.1 SWR1 complex subunit 2...	[more]
XP_023550830.1	2.2e-148	84.40	SWR1 complex subunit 2 [Cucurbita pepo subsp. pepo]	[more]
KAG6579641.1	2.2e-148	84.40	SWR1 complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928918.1	8.3e-148	84.40	SWR1 complex subunit 2 [Cucurbita moschata] >XP_022928919.1 SWR1 complex subunit...	[more]

BLAST of ClCG01G004860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IP06	9.1e-97	57.36	SWR1 complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=SWC2 PE=1 SV=1	[more]
Q9VKM6	3.4e-11	29.97	Vacuolar protein sorting-associated protein 72 homolog OS=Drosophila melanogaste...	[more]
Q5E9F6	1.3e-10	28.99	Vacuolar protein sorting-associated protein 72 homolog OS=Bos taurus OX=9913 GN=...	[more]
Q5R5V9	3.8e-10	29.31	Vacuolar protein sorting-associated protein 72 homolog OS=Pongo abelii OX=9601 G...	[more]
Q15906	1.9e-09	29.00	Vacuolar protein sorting-associated protein 72 homolog OS=Homo sapiens OX=9606 G...	[more]

BLAST of ClCG01G004860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZS7	8.1e-149	84.40	SWR1 complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111469126 PE=3 SV=1	[more]
A0A6J1EM84	4.0e-148	84.40	SWR1 complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111435683 PE=3 SV=1	[more]
A0A5A7UJC3	1.5e-147	83.89	SWR1 complex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3CUJ8	3.4e-147	83.61	SWR1 complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103504701 PE=3 SV=1	[more]
A0A0A0KN54	9.3e-145	82.73	YL1_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G168770 PE=3 ...	[more]

BLAST of ClCG01G004860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36740.1	6.4e-98	57.36	sequence-specific DNA binding transcription factors;DNA binding;DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 184..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..82
IPR013272	Vps72/YL1, C-terminal	SMART	SM00993	YL1_C_2	coord: 305..334 e-value: 2.1E-15 score: 67.2
IPR013272	Vps72/YL1, C-terminal	PFAM	PF08265	YL1_C	coord: 306..334 e-value: 1.2E-16 score: 60.1
IPR008895	Vps72/YL1 family	PFAM	PF05764	YL1	coord: 15..234 e-value: 7.4E-35 score: 121.2
IPR008895	Vps72/YL1 family	PANTHER	PTHR13275	YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1	coord: 4..343

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G004860.2	ClCG01G004860.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043486	histone exchange
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0005634	nucleus