ClCG01G004485 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G004485
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr01: 4790610 .. 4791845 (+)
RNA-Seq ExpressionClCG01G004485
SyntenyClCG01G004485
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCAGAAGATTCAAAAAGCGTCCCAGGTATTCCCTGACTTCATATGTGGCATTTATGTAAGAAAATGCATTACATAGAAAGTTCCACTTTACACCTTCATATGTATATTTAAATTACTTTTGCCAGTCAGAAAGAAATAAGGGACAAGAAAGACATGTTCTGCTCATACTTATTGATCACCCCTTTATATTATAATGAAGTTGCATGCTCACAAAAACCAATTGTTTTCACTGGTTCTTATCAAGAATCCTTGCTGATAGAAATGGATATTCTTCTGCAGTTTTATAATTTTTCTACCGTATAATTTGTGTTTGAAATGAAAGGAAGTCGTGTGCATTTCCTATTGAAAAAGAAATATGATTCGTCTTATGGTTAATTGTGTTTTTCTTCATTGTACAGCTGTTCCTTTGATCATTCTCAAAGGATTTAACGCATTGACATCAAACTAGAAGGAGGGTTTGGAAACTCTATGAACTAAGTTTGAATTGATATCTTTATTAAAGTAATAGACAGTTGTCTCCAAGGATTGGTTCAAAGTGTAGCTATGTGGTTTGCATGCCCTTTTGATGAAAACAAAGTAATTATTTGTAAAATCTTTGAATGAGTAATTCCTCCCTGGTCATCTCTCATCAATTATGGTAGAGGTTTACTTGGTTTTTGATACTCTACATACATATTTTAGGTATTGTTTCATAACTATTTGAGTTTTTAAACTTTAAGCTCATGTGTACTACTTCTACTGATTTGTTCTTTTTATTTTGTTATTTACTTCCTACTAATGTATTTAACATGTTAAACTTAGAAAACTAAAACAAAGTAGGCCTAATGTTTTTGTTCTGAAATTTATGTGTATTTTTGCACTGTTTTTTTTAGTATAGANTTAAACTTAGAAAACTAAAACAAAGTAGGCCTAATGTTTTTGTTCTGAAATTTATGTGTATTTTTGCACTGTTTTTTTTAGTATAGATTTTACCCGTTAAATTCCAAAAATAAAAATAAATTTTTGGAACTCAAAAGAGTAATTTTTGTTATTGAAGTTTAAGTTGAAAATTGTGAGAAAAAAAGGACAATTTTCAAACATCGTTTTAAATGGAGCCTTTATGTTTTTGTTTTGTGAACAATGGATAATAGGTAGTAAGGGTAATAAAGCCAAGAGAAGCTTTTACATTCAAAAGATTTGAAGCTGACTCTGTCATTTTCATTTTGACAGCACAAGATTCTCATCATTGA

mRNA sequence

ATGAAGTTCAGAAGATTCAAAAAGCGTCCCAGTTGTCTCCAAGGATTGGTTCAAAGTGTAGCTATGTGGTTTGCATGCCCTTTTGATGAAAACAAAGTAGTAAGGGTAATAAAGCCAAGAGAAGCTTTTACATTCAAAAGATTTGAAGCTGACTCTGTCATTTTCATTTTGACAGCACAAGATTCTCATCATTGA

Coding sequence (CDS)

ATGAAGTTCAGAAGATTCAAAAAGCGTCCCAGTTGTCTCCAAGGATTGGTTCAAAGTGTAGCTATGTGGTTTGCATGCCCTTTTGATGAAAACAAAGTAGTAAGGGTAATAAAGCCAAGAGAAGCTTTTACATTCAAAAGATTTGAAGCTGACTCTGTCATTTTCATTTTGACAGCACAAGATTCTCATCATTGA

Protein sequence

MKFRRFKKRPSCLQGLVQSVAMWFACPFDENKVVRVIKPREAFTFKRFEADSVIFILTAQDSHH
Homology
The following BLAST results are available for this feature:
BLAST of ClCG01G004485 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G004485 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G004485 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG01G004485 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 8.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G004485.1ClCG01G004485.1mRNA