ClCG01G001920 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G001920
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr01: 1917336 .. 1917705 (-)
RNA-Seq ExpressionClCG01G001920
SyntenyClCG01G001920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGTTGGTTGGAAGCGGTGACGGAGAACGTGGTTGCGGTGGCCGGAGAACTGCCGGAGAGTCACGTGGCGGGCCCCACTTTCCACGAGGTTGCACATGACCATAATCGTTACCGCGTCCGTCCACGTACGGAAGAAAAAGAAAAATCACCGTCAATTACGCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTAAATTATTCTTTAATTTCCACTTTAAGAGACGAGTGGGCTTTGCAGGTGTGAATCGACGGTTGGTATCAGATTTGATATGCTACAATCCAACGACAGGTAAAGCGTGGCTGAAGAATACGACGCCGTATGCTCCGAAAAGTGTAGACAACAAACGGAGCCGCTTTGTGGTTTGA

mRNA sequence

ATGGCTGGTTGGTTGGAAGCGGTGACGGAGAACGTGGTTGCGGTGGCCGGAGAACTGCCGGAGAGTCACGTGGCGGGCCCCACTTTCCACGAGGTTGCACATGACCATAATCGTTACCGCGTCCGTCCACGTGTGAATCGACGGTTGGTATCAGATTTGATATGCTACAATCCAACGACAGGTAAAGCGTGGCTGAAGAATACGACGCCGTATGCTCCGAAAAGTGTAGACAACAAACGGAGCCGCTTTGTGGTTTGA

Coding sequence (CDS)

ATGGCTGGTTGGTTGGAAGCGGTGACGGAGAACGTGGTTGCGGTGGCCGGAGAACTGCCGGAGAGTCACGTGGCGGGCCCCACTTTCCACGAGGTTGCACATGACCATAATCGTTACCGCGTCCGTCCACGTGTGAATCGACGGTTGGTATCAGATTTGATATGCTACAATCCAACGACAGGTAAAGCGTGGCTGAAGAATACGACGCCGTATGCTCCGAAAAGTGTAGACAACAAACGGAGCCGCTTTGTGGTTTGA

Protein sequence

MAGWLEAVTENVVAVAGELPESHVAGPTFHEVAHDHNRYRVRPRVNRRLVSDLICYNPTTGKAWLKNTTPYAPKSVDNKRSRFVV
Homology
[Close]
BLAST of ClCG01G001920 vs. NCBI nr
Match: KGN50023.1 (hypothetical protein Csa_000226 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-09
Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MAGWLE--AVTENVVAVAGELPESHVAGPTFHEVAHDHNRYRVRPRVNRRLVSDLI 55
          M GWL+   V ENV AVAGELPE H+   TFH + HDHNRYRVRPR   RL SD +
Sbjct: 1  MVGWLDGSGVAENVGAVAGELPEPHMVDSTFHVIPHDHNRYRVRPRAYGRLRSDFV 56

[Close]
BLAST of ClCG01G001920 vs. ExPASy TrEMBL
Match: A0A0A0KKE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150410 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09
Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MAGWLE--AVTENVVAVAGELPESHVAGPTFHEVAHDHNRYRVRPRVNRRLVSDLI 55
          M GWL+   V ENV AVAGELPE H+   TFH + HDHNRYRVRPR   RL SD +
Sbjct: 1  MVGWLDGSGVAENVGAVAGELPEPHMVDSTFHVIPHDHNRYRVRPRAYGRLRSDFV 56

The following BLAST results are available for this feature:
BLAST of ClCG01G001920 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50023.12.8e-0962.50hypothetical protein Csa_000226 [Cucumis sativus][more]
BLAST of ClCG01G001920 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG01G001920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKE51.3e-0962.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150410 PE=4 SV=1[more]
BLAST of ClCG01G001920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G001920.1ClCG01G001920.1mRNA