ClCG01G001300 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCTAGTATCGGTACTGGCGGAGATTCTAGAGGAGTACACGGCGGTGCTCGCGGCGGTGCTCCGGCAGCTCTTTTATTCCGCGCCATTTCCTCGCCGTGTCCGATTTCTCATTCTTCATAATCTCCCTTTCCCCGATCGCCCAAGTGGCTTATCGGCGTAGCGGCCATTTTTGTAAGCTTCCTCTTCTCTCCCTTCAATTGGTATGATTTGATAATTTCATCTCACGATTTTCTTCTTCTTATGGTTTGATCTGTTCTTCGTTTATCGATCTCTGGATTGTTGTTTTTATGGATTTCGAATTTGAGTCGAAGGTGAATTGGATTTTGGATCTCTGTTTTCCTCTGTTTCAGATTGGGGACTGACGGCTGAGCGGTCGCCCCAGATTCATCGGCGGATTTTTTTTTTTTTTTCTTTTTTAATT ATGATGCTAGTATCGGTACTGGCGGAGATTCTAGAGGAGTACACGGCGGTGCTCGCGGCGGTGCTCCGGCAGCTCTTTTATTCCGCGCCATTTCCTCGCCGTGTCCGATTTCTCATTCTTCATAATCTCCCTTTCCCCGATCGCCCAAGTGGCTTATCGGCATTGGGGACTGACGGCTGAGCGGTCGCCCCAGATTCATCGGCGGATTTTTTTTTTTTTTTCTTTTTTAATT ATGATGCTAGTATCGGTACTGGCGGAGATTCTAGAGGAGTACACGGCGGTGCTCGCGGCGGTGCTCCGGCAGCTCTTTTATTCCGCGCCATTTCCTCGCCGTGTCCGATTTCTCATTCTTCATAATCTCCCTTTCCCCGATCGCCCAAGTGGCTTATCGGCATTGGGGACTGACGGCTGA MMLVSVLAEILEEYTAVLAAVLRQLFYSAPFPRRVRFLILHNLPFPDRPSGLSALGTDG Homology
BLAST of ClCG01G001300 vs. NCBI nr
Match: XP_008437471.1 (PREDICTED: uncharacterized protein LOC103482883 [Cucumis melo]) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of ClCG01G001300 vs. NCBI nr
Match: XP_038907007.1 (uncharacterized protein LOC120092849 [Benincasa hispida]) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15 Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of ClCG01G001300 vs. NCBI nr
Match: XP_011654666.1 (uncharacterized protein LOC105435431 [Cucumis sativus] >KGN49959.1 hypothetical protein Csa_000696 [Cucumis sativus]) HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14 Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of ClCG01G001300 vs. NCBI nr
Match: XP_022970120.1 (uncharacterized protein LOC111469109 [Cucurbita maxima]) HSP 1 Score: 79.7 bits (195), Expect = 9.2e-12 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of ClCG01G001300 vs. NCBI nr
Match: KAG7017064.1 (hypothetical protein SDJN02_22176, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 79.7 bits (195), Expect = 9.2e-12 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of ClCG01G001300 vs. ExPASy TrEMBL
Match: A0A1S3AUP0 (uncharacterized protein LOC103482883 OS=Cucumis melo OX=3656 GN=LOC103482883 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 8.7e-16 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of ClCG01G001300 vs. ExPASy TrEMBL
Match: A0A0A0KM75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146820 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 7.3e-15 Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of ClCG01G001300 vs. ExPASy TrEMBL
Match: A0A6J1I1Z0 (uncharacterized protein LOC111469109 OS=Cucurbita maxima OX=3661 GN=LOC111469109 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.5e-12 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of ClCG01G001300 vs. ExPASy TrEMBL
Match: A0A6J1EQP1 (uncharacterized protein LOC111435715 OS=Cucurbita moschata OX=3662 GN=LOC111435715 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.5e-12 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of ClCG01G001300 vs. ExPASy TrEMBL
Match: A0A6J1DZC9 (uncharacterized protein LOC111025999 OS=Momordica charantia OX=3673 GN=LOC111025999 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.4e-10 Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of ClCG01G001300 vs. TAIR 10
Match: AT1G33055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 1.3e-08 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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