ChyUNG230020 (gene) Cucumber (hystrix) v1

Overview
NameChyUNG230020
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold32_size1584725: 410994 .. 415278 (-)
RNA-Seq ExpressionChyUNG230020
SyntenyChyUNG230020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCTGAAATTACAGTTAACCATAGGGGAGTGGATTTCATTATGACTGTGAATTATGAATGGAAGCCTAAGAAATGTAATTTGTGTCGTGCCTTTGGGCATTCTGGTGGTAAGTGCCCTAGGATTGTGGAAAATAAGGTACATCAGAAGGAGGAAGTGAGAAAGGTGGTTTTTAACAAAGAGGGGGGTCTGACTAATGTGGCGTGTGGAGATGTGGTGTTGGAGTCATTTAAACAGTTGGAGGAAGGTGAGATTAATAGTTCTCCCATTAGGCCTACAAAGGAAAAGGAGGTGGGTAATCGGGATGATTTTACTCTTGTCACTAGGAAGAAATGGGAGTTGGTTTCTGTTCGAGATAAGGGTAAAAGTGTGGATGTGACTATGCCTAACTCTTTTGGCAGCCTTATGGAGTTGGGTAAGGGAGACAAGTGGGCCGTATCTATAGTGGAAGGCTCCCCTCATCCCTTACAGGTGGATGATACTGCTATGGTTCTTAGGGGCATGCCCTCATATGGTAATCCTGTAGGAGCGAAGGCTCCTAATTCTTCTCATAATTAGTTAGTGTTCTTTGAATGTGAATGGTCTAAATAGTGTTGTAAAGTGTAGAACGGTGCTTGATTTTTTGGGTGTGTCTTCTATGGGTTTCTGTTGTCTTCTAGAAACTAGAGTTCGAAAAGAAAATTTTGGTTCTATCTCCAATAGGTTTGGAGATTTGTGGGATTTCATTAGTAACTACAATAACAGTGAGATTGGTCGTATGCGGATAATGTGGAAGAGGAGTCGCTTCGTTTTTACTTCTGGTGAGGAGGAAGATCAGTTTGTCTCTAGGTCATTAACTGATCTACTCTCTGGGGATTATGTAGAGGTACTATGTGTTTATGCCTTTAATAATAATGTTGAGAGACGTATGTTGTGGCATTGTATGGGTGAGATCTCTTCTAGATGGACGAGGTCAGGTGTTGTCATGGGTGACTTTAATGCCATTAGGCATCATTCTGGAGCTTTTGGTGGGTCTTCTATTACTGGTGATATAGAGGAGTTCGATATAGCCATTCGTGAGACTGACCTAGCTGAACCATCGATTTAGGGCAACTGGTTCACCTGGACTAGTAAGGTCCATGGGTCTGGTTGTATGAGAAGGCTCGGTCGTATTTTGGTTAATGATGAAGGTCTTGTTGCTTGGCCAAATATGAGAGTTAATGTTTTACCTTGGGGCATTTCTGATCACTCACCTATTCTAGTCTATCCCAGCATTCAGTAGAGACATAGGGTGGTTTCTTTTCGTTTTTTCAACCACTGCGTTGAGGAAGCTTCTTTTATGGATGTTGTCTCATTGGTTTGGGTTCGACATGCAGGGGTTTCTCCGATTGTGAGTTTCATGAGAAATTTACATAATCTCACGCCTGCCCTCCGCAGACATTTTGGTAAGAACATTCGGAGGCTTAGTGAGGAGGTTCGTATTGCTAAAGAATCCATGGATAGAGCTCAGAGAGAGGTTGTGCGAAATGCTATGTTTGATGTTCTAAGTCATCAAGCAAGTTTTGCCACTAAGGCTTTTTGGAAAGCTGTTAGACTGGAGGAAACCTCTATGCGTCAAAAGTTCAGGATTCAATGGCTGAAGTTAGGTGATCAAAACACTACCTTTTTCCATCGATCTTTGCGTTCTCGTTTGAGTAGTAAATCTATGCGTTCTATGATCGATCCGGATGGTTGTCGATTGACTACTCATGAAAGGGTGGCTCAAGTGTCAGTTAATTATTTTCGTAATAGTTTGGGCTCTCAGAATATTGGCTATAGAGAGTTGTCTCCTTGGTTTGATGATATTGTTCAGTTTAGGTGGTCTGAGGAGTGTTGTCAAGCTTTACAAGCTCCTATTGGGTGAGAGGAGGTTAGAAAAGTCTTATTTTCTATGGATATTGGTAAGACTCCTAGTCCTTATGGGTTTTTTGTTGGTTTCTTCAAAGGTGCCTGGGCTATGGTTGGGGAGGATTTTTGTGATGTCGTTCTGCATTTCTTTGAGACTTGTTATCTTCCACATAGAGTGAATAGTGCTTCCATTACTCTTATTCCTAAACACTGTGGAGTTGAATGTATGGAGAATTTCAGGCCTATTTCTTGTTGTGATGTTATTTACAAATGTATTTCAAAGATTTTGCCTGATAGACTTCGTGGGTGGCATACTTCATTTATCAGTCTTAATCAGTCTGCTTTTATTCCAAGGAGGGGTATTATTGATAATATTCTTCTTTGTCAGGAGATGGTTGGGGGTTAGCATACTAACTCTAGTAAACCTCGGTGTACTATGAAAGTTGATCTTCAAAAATCCTATGATTCTGTTAACTGGGATTTTCTTTTCGGTTTGTTGACGGCTATTGGCACCCTCTTGAGGTTTGTGAGTTGGCTGAGAGCTTGAGTTGGCGAATTAGAAACCACCAAAAAGACATTTCACGCAAAGAAAATGGGAGTTTTTAAGAACTTTTCGTATCGGTGCCAAAAAAGGCAAACACTATGCCTCGAACTCAGTTCTTATTTTGGATCAAAAGTGGTCCATCAACAATTTTCTTTTGTTGGTCAGTGCCCTTCCTCATTTACTCAAAGTATAGGTTAGGAAGCAAGGTCGTTGGGGGAGTACTAAGGTGCCAACCAAAACGATCGAAAAGGTGGCCAATGCTTCCAAAGAATGGCGAACATTTGGCCTATAAGACCCAAGCCTAATCATTCAATATTTAAGAAGTAAAATTTTGACTAAGTGTCCCAAAATAAGTGTTTTGGGTGCTTTACGCGAAAAGAGGTAGGTTAATCTGCGATAAAGGTTATGCAAGAAGACTTTTGAAAGGTTAGGCAATAAGAAGTTGGTATCTAAGGTAGTTCACGAGGTAGACTTTTAAAGTGTAAGTGTAATTGCGCAATAAGGACATCACGCGAGAAGAAAGATCTGGCGAGAAGAAGTGATGAAACTTCTCAGAAATTTCTTAAGTGTGTTAATGGGTCGTGTGTAGTGTTTAAGTTAAACATGTTTAGGAAAGCTGGCAAGCGGATAAGAGTTTGGAGATGACTAAGCATTTTAGGAAGTAGTATAAATAGGGGGAGCAACTCAGATTATTTGGTATTGTTATTCTGTGAATTTAAAGAGAAACGTTTAAGTGTTGAAGTGTTGTCAAAGTGTCTACGCGAGAAGAGAAAAGAGGAAGCATTTCGAGTTTATTCAAGTGTTGTGAGTATTTCTTAACAGAATTTATATGTTTTGAAGCTTTCTTTACTTAAGTGTTTATTGTTTTGAACAATGATTTCAATACAAAGTTTCTAAAGGAATTTCAAAGTAAAATGTATTCTAAAGCATGTTTTAAAGGATGATTTGATTAATGTGATTTCAATAATTGTGAAATGATTTTCAAACCATTAGTTCCTTCCTGTCGATAAGCTAACTTTTATGTTGACATAAAGAGTAAAGGTCACCATGGGGTGTACGGGACTACATGGTGTTAAGAAGTTGGTTTATGAGTTGAAAGGAGCGTATAAGGCTTAGCAACCTGGGCAACAAGGACAAATTTGTATATCCTCGGATGATGTTGTTATAGTAGTCTAAACGTGAAGTTACATGACCTAATGCAGAGGATGATTCAGGAACCTTGGGGAAAGGAATGTTTGGTAACTAATGGGTGTTATGCAAAATGATATGTTCATATATGAAATTGTTATATTGAATTTATATGAAATTGTTATGTTTGGAGAAATGATATTTGGAAAGGTATTGTGAAAAGAATTTATTAAAAACCTCACTAAGTCTGTAGAGTTATGTTTTTTTTTTTAAATTCATCTTCCAGGAATCAGGCGATAAGGCCAAATAGGAGAAAGTGAAGGGCTTACTAGGCGAGAAGGCTACCAAGACGATTAGCTTTAGGTTAAGTTTATTGTATTTATGCTTATGTGTGTAAATTTTTTGTAAGCAGTTTGGACAAAGGTTAATAAAGATTAGTTGGTTTATTTCTCTGTTTTAAGTATGTTTATCACCTGATAAAGTACTTGTTAAGTTATAGGTTAAGGGAAAGAAAAGAGTAGGCGATTAAGCAAAAGCTTGATGTCACGTGGTTAGTTTCTCAAGCTAACCATACATGCGACACTTGGCTTGTTTATGATGCTCGTGTAGTCAAGTAAGCCTTTTGAAAGGTTAGTACACAAAGCACTTTGAGAATATGTTGCAACGAAAGTATTTGAAATGATTGCAAAGCACGAGAGAGTTTGGAAAAATGAGGGAGCTTGGATGGACACTTCTTGGAAATGA

mRNA sequence

ATGCCTGCTGAAATTACAGTTAACCATAGGGGAGTGGATTTCATTATGACTGTGAATTATGAATGGAAGCCTAAGAAATGTAATTTGTGTCGTGCCTTTGGGCATTCTGGTGGTAAGTGCCCTAGGATTGTGGAAAATAAGGTACATCAGAAGGAGGAAGTGAGAAAGGTGGTTTTTAACAAAGAGGGGGGTCTGACTAATGTGGCGTGTGGAGATGTGGTGTTGGAGTCATTTAAACAGTTGGAGGAAGGTGAGATTAATAGTTCTCCCATTAGGCCTACAAAGGAAAAGGAGGTGGGTAATCGGGATGATTTTACTCTTGTCACTAGGAAGAAATGGGAGTTGGTTTCTGTTCGAGATAAGGGTAAAAGTGTGGATGTGACTATGCCTAACTCTTTTGGCAGCCTTATGGAGTTGGGTAAGGGAGACAAGTGGGCCGTATCTATAGTGGAAGGCTCCCCTCATCCCTTACAGGTGGATGATACTGCTATGCACGAGAGAGTTTGGAAAAATGAGGGAGCTTGGATGGACACTTCTTGGAAATGA

Coding sequence (CDS)

ATGCCTGCTGAAATTACAGTTAACCATAGGGGAGTGGATTTCATTATGACTGTGAATTATGAATGGAAGCCTAAGAAATGTAATTTGTGTCGTGCCTTTGGGCATTCTGGTGGTAAGTGCCCTAGGATTGTGGAAAATAAGGTACATCAGAAGGAGGAAGTGAGAAAGGTGGTTTTTAACAAAGAGGGGGGTCTGACTAATGTGGCGTGTGGAGATGTGGTGTTGGAGTCATTTAAACAGTTGGAGGAAGGTGAGATTAATAGTTCTCCCATTAGGCCTACAAAGGAAAAGGAGGTGGGTAATCGGGATGATTTTACTCTTGTCACTAGGAAGAAATGGGAGTTGGTTTCTGTTCGAGATAAGGGTAAAAGTGTGGATGTGACTATGCCTAACTCTTTTGGCAGCCTTATGGAGTTGGGTAAGGGAGACAAGTGGGCCGTATCTATAGTGGAAGGCTCCCCTCATCCCTTACAGGTGGATGATACTGCTATGCACGAGAGAGTTTGGAAAAATGAGGGAGCTTGGATGGACACTTCTTGGAAATGA

Protein sequence

MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFNKEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTKEKEVGNRDDFTLVTRKKWELVSVRDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDDTAMHERVWKNEGAWMDTSWK*
Homology
[Close]
BLAST of ChyUNG230020 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.0e-55
Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           M AEITVN RGVDF ++VNYEWKP+KCNLC A GHSGGKCPR VE+K+ Q+E V K++  
Sbjct: 114 MRAEITVNLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSKIIPG 173

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K  G+ +  C  VVLESFKQLEEGEI SSP R     EKEVG RD+FTLVTRKK ELVSV
Sbjct: 174 KGEGVDSEPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRKKSELVSV 233

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 162
           RD+GKS+ V MPNSFGSL+E+G  DKWA++++EGSP PLQVD+
Sbjct: 234 RDRGKSIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDE 276

[Close]
BLAST of ChyUNG230020 vs. ExPASy TrEMBL
Match: A0A5A7TVB8 (Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00750 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.7e-54
Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           MPAEITVN RGVDFI+ VNY+ KP+KCNLC AFGHS GK PR VE+KV Q+E V K++  
Sbjct: 114 MPAEITVNLRGVDFIVLVNYKLKPRKCNLCWAFGHSSGKYPRSVESKVLQEEVVSKIIPG 173

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K   L +  CG VVLESFKQLE+GEI SSP RP+   EKEV  RD+FTLVTRKK ELVS+
Sbjct: 174 KRDELDSETCGGVVLESFKQLEDGEIRSSPNRPSSQVEKEVDKRDEFTLVTRKKRELVSI 233

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 162
           RD+GKS++VTMPNSFGSL ++G  DKWA++IVEGSP P QVD+
Sbjct: 234 RDRGKSLEVTMPNSFGSLFKVGDVDKWALTIVEGSPPPSQVDE 276

[Close]
BLAST of ChyUNG230020 vs. ExPASy TrEMBL
Match: A0A5A7V084 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00100 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.5e-53
Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           MPAEITV+ RGVDFI+++NYEWKP KCNLC  FGHSGGKC R VE+KV Q+E V KV  +
Sbjct: 248 MPAEITVSLRGVDFIVSINYEWKPWKCNLCCVFGHSGGKCHRNVESKVIQEEVVSKVSPS 307

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K  GL +  CG+VVLESFKQLEEGEI SS  R +   EKEVG RDDFTLVTRKK ELV V
Sbjct: 308 KGDGLDSEPCGEVVLESFKQLEEGEIRSSRNRHSSQVEKEVGKRDDFTLVTRKKRELVFV 367

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 162
           RD+GKS++VTMPN FGSL+E+G  DKWA++I++GS   LQVD+
Sbjct: 368 RDRGKSLEVTMPNFFGSLLEVGDFDKWALTIIDGSLSALQVDE 410

[Close]
BLAST of ChyUNG230020 vs. ExPASy TrEMBL
Match: A0A5A7U3C2 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00410 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.2e-53
Identity = 110/163 (67.48%), Postives = 128/163 (78.53%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           MPAEITV+ RGVDF ++VNYEWKP+KCNLC AFGHSG KC R VE+K  Q+E     V +
Sbjct: 47  MPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSKCSRSVESKTIQEE-----VVH 106

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K  GL +  CG+VVLESFKQLEEG+I SSP R     EK VG  DDFTLVTRKK ELVSV
Sbjct: 107 KGDGLDSEPCGEVVLESFKQLEEGKIRSSPNRHNSQVEKGVGKSDDFTLVTRKKSELVSV 166

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 162
           RD+GKS++V MPNSFGSL+E+G  DKW +SI+EGSP PLQVD+
Sbjct: 167 RDRGKSMEVIMPNSFGSLLEVGDADKWVLSIIEGSPPPLQVDE 204

[Close]
BLAST of ChyUNG230020 vs. ExPASy TrEMBL
Match: A0A1S3CRZ6 (uncharacterized protein LOC103504100 OS=Cucumis melo OX=3656 GN=LOC103504100 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.2e-53
Identity = 106/163 (65.03%), Postives = 128/163 (78.53%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           MPA+ITV+  GVDF +++NYEWKP+KCNLC AFGHSG KC R VE+K  Q+E V K++  
Sbjct: 47  MPAQITVSLGGVDFNVSINYEWKPRKCNLCCAFGHSGSKCSRSVESKTIQEEVVHKIIHG 106

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K  GL +  CG+VVLESFKQLEE EI SSP R     E+  G  D+FTLVTRKK ELVSV
Sbjct: 107 KRDGLDSKPCGEVVLESFKQLEEVEIRSSPNRHNSKVERGGGKSDEFTLVTRKKSELVSV 166

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 162
           RD+GKS++V MPNSFGSL+E+G  DKWA+SI+EGSP PLQVD+
Sbjct: 167 RDRGKSMEVIMPNSFGSLLEVGDADKWALSIIEGSPPPLQVDE 209

[Close]
BLAST of ChyUNG230020 vs. NCBI nr
Match: XP_004142722.2 (uncharacterized protein LOC101204295 [Cucumis sativus])

HSP 1 Score: 222 bits (566), Expect = 2.05e-68
Identity = 117/164 (71.34%), Postives = 123/164 (75.00%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           M AEITVN R VDFI+TVNYEWKP+KCNL RAF H  GKCPRIVENKVH +EEVRK    
Sbjct: 72  MLAEITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEEVRK---- 131

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTKEKEVGNRDDFTLVTRKKWELVSVRD 120
                               LEEGEINSS IRPTKEK VGN+DDFTLV  KKWELV VR 
Sbjct: 132 --------------------LEEGEINSSLIRPTKEKGVGNQDDFTLVIGKKWELVYVRY 191

Query: 121 KGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDDTAM 164
           KGKSVDVTMPNSFG+LMELGKGDKWA+SIVEGS  PLQVDDT M
Sbjct: 192 KGKSVDVTMPNSFGNLMELGKGDKWALSIVEGSALPLQVDDTTM 211

[Close]
BLAST of ChyUNG230020 vs. NCBI nr
Match: KAA0049770.1 (hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa] >TYK12107.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 1.60e-65
Identity = 110/163 (67.48%), Postives = 128/163 (78.53%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           MPAEITV+ RGVDF ++VNYEWKP+KCNLC AFGHSG KC R VE+K  Q+E     V +
Sbjct: 47  MPAEITVSLRGVDFNVSVNYEWKPRKCNLCCAFGHSGSKCSRSVESKTIQEE-----VVH 106

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K  GL +  CG+VVLESFKQLEEG+I SSP R     EK VG  DDFTLVTRKK ELVSV
Sbjct: 107 KGDGLDSEPCGEVVLESFKQLEEGKIRSSPNRHNSQVEKGVGKSDDFTLVTRKKSELVSV 166

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 161
           RD+GKS++V MPNSFGSL+E+G  DKW +SI+EGSP PLQVD+
Sbjct: 167 RDRGKSMEVIMPNSFGSLLEVGDADKWVLSIIEGSPPPLQVDE 204

[Close]
BLAST of ChyUNG230020 vs. NCBI nr
Match: KAA0060724.1 (hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 217 bits (553), Expect = 3.52e-64
Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           MPAEITV+ RGVDFI+++NYEWKP KCNLC  FGHSGGKC R VE+KV Q+E V KV  +
Sbjct: 248 MPAEITVSLRGVDFIVSINYEWKPWKCNLCCVFGHSGGKCHRNVESKVIQEEVVSKVSPS 307

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K  GL +  CG+VVLESFKQLEEGEI SS  R +   EKEVG RDDFTLVTRKK ELV V
Sbjct: 308 KGDGLDSEPCGEVVLESFKQLEEGEIRSSRNRHSSQVEKEVGKRDDFTLVTRKKRELVFV 367

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 161
           RD+GKS++VTMPN FGSL+E+G  DKWA++I++GS   LQVD+
Sbjct: 368 RDRGKSLEVTMPNFFGSLLEVGDFDKWALTIIDGSLSALQVDE 410

[Close]
BLAST of ChyUNG230020 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (569), Expect = 8.93e-64
Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           M AEITVN RGVDF ++VNYEWKP+KCNLC A GHSGGKCPR VE+K+ Q+E V K++  
Sbjct: 114 MRAEITVNLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEVVSKIIPG 173

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K  G+ +  C  VVLESFKQLEEGEI SSP R     EKEVG RD+FTLVTRKK ELVSV
Sbjct: 174 KGEGVDSEPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRKKSELVSV 233

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 161
           RD+GKS+ V MPNSFGSL+E+G  DKWA++++EGSP PLQVD+
Sbjct: 234 RDRGKSIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDE 276

[Close]
BLAST of ChyUNG230020 vs. NCBI nr
Match: KAA0047412.1 (putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa] >TYK14087.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (561), Expect = 1.32e-63
Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 0 

Query: 1   MPAEITVNHRGVDFIMTVNYEWKPKKCNLCRAFGHSGGKCPRIVENKVHQKEEVRKVVFN 60
           MPAEITVN RGVDFI+ VNY+ KP+KCNLC AFGHS GK PR VE+KV Q+E V K++  
Sbjct: 114 MPAEITVNLRGVDFIVLVNYKLKPRKCNLCWAFGHSSGKYPRSVESKVLQEEVVSKIIPG 173

Query: 61  KEGGLTNVACGDVVLESFKQLEEGEINSSPIRPTK--EKEVGNRDDFTLVTRKKWELVSV 120
           K   L +  CG VVLESFKQLE+GEI SSP RP+   EKEV  RD+FTLVTRKK ELVS+
Sbjct: 174 KRDELDSETCGGVVLESFKQLEDGEIRSSPNRPSSQVEKEVDKRDEFTLVTRKKRELVSI 233

Query: 121 RDKGKSVDVTMPNSFGSLMELGKGDKWAVSIVEGSPHPLQVDD 161
           RD+GKS++VTMPNSFGSL ++G  DKWA++IVEGSP P QVD+
Sbjct: 234 RDRGKSLEVTMPNSFGSLFKVGDVDKWALTIVEGSPPPSQVDE 276

The following BLAST results are available for this feature:
BLAST of ChyUNG230020 vs.
Match NameE-valueIdentityDescription
BLAST of ChyUNG230020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V5J22.0e-5568.10Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... [more]
A0A5A7TVB81.7e-5468.10Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa ... [more]
A0A5A7V0841.5e-5368.10Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cuc... [more]
A0A5A7U3C23.2e-5367.48Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cuc... [more]
A0A1S3CRZ63.2e-5365.03uncharacterized protein LOC103504100 OS=Cucumis melo OX=3656 GN=LOC103504100 PE=... [more]
BLAST of ChyUNG230020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142722.22.05e-6871.34uncharacterized protein LOC101204295 [Cucumis sativus][more]
KAA0049770.11.60e-6567.48hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa] >TYK1210... [more]
KAA0060724.13.52e-6468.10hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466... [more]
KAA0062888.18.93e-6468.10non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... [more]
KAA0047412.11.32e-6368.10putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa] >... [more]
BLAST of ChyUNG230020 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ChyUNG230020.1ChyUNG230020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0003964 RNA-directed DNA polymerase activity