Chy9G171450 (gene) Cucumber (hystrix) v1

Overview
NameChy9G171450
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH09: 15877954 .. 15878787 (-)
RNA-Seq ExpressionChy9G171450
SyntenyChy9G171450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGATTCAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCCTGCAGGAAAATGTTAAGGTGTGACTGGAAAAGTGGAGTGGAGCATCTTTTACTTGCTTTTTGCTGTAGTTTTCTTTTCCCAACTAGACAAAATAGTACGTGGCAATATTCTTCAATGAGTATTTCTGTTGTTGATTTAACTTTGACATCTTTTTTTTCTTCCTGATTTTAATTCATATTGTCTGCCAATTGGGAACATGAACTGTTGTTTGGATTTAAATAAGCCGCTCATTCCCTTTGGACTGGAAAGGCGTCTTTTAAGAATAAATGAAGGTTCTTTGGGCTATTATGATTATATAAATCATCCCAAAATTACTTTAGAAGTTTCGTTTATTGAATTGGCTCCTCCATTTTTAAAAGGAAAATTCTGTTTTTATAGAAAAATTGAGAATAGTTATTTAATGCCATTGACAAGACCATTGGTTTTCTTGTGTGTTTATTCTGAAATGAACAATTGTTTAGGATTTTCTTTGTCCCTTTGCATTATTCGGTATTTCTGGTTGTCGTGTTTTTGACTATATGAGGTCCAAGCTATAGTTCTATTTTAGGATCTTTTTCATTTTATTGGATATCAGATGAAGCATCTTGATGCATCTATGCTAAGAGAACTAACAGTTGTGTGGCCTGGTTTTAGGAAACCAAAAAAAGAAAAAAGAAAAAAAGCAAATACAGTTCTTATTCACCTCTTTCTCATTGCAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

mRNA sequence

ATGTGGATTCAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCCTGCAGGAAAATGTTAAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

Coding sequence (CDS)

ATGTGGATTCAGATTATGAACAAGTTTTCTTCCATATCAAGGCATAGGTTCTCCATGTCAGGCCATTATAGAAGCCTGCAGGAAAATGTTAAGTTGGCAATGCATCTCCATTCCTCAAAACTTTGCTTAGCTGCGTACTTTGGTGATATGTGA

Protein sequence

MWIQIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM*
Homology
[Close]
BLAST of Chy9G171450 vs. ExPASy TrEMBL
Match: A0A0A0KLY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.2e-17
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 5  IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 51
          IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM
Sbjct: 31 IMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 76

[Close]
BLAST of Chy9G171450 vs. NCBI nr
Match: KAE8647804.1 (hypothetical protein Csa_000130 [Cucumis sativus])

HSP 1 Score: 105 bits (263), Expect = 1.10e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MWIQIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 50
          MWIQIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM
Sbjct: 1  MWIQIMNKFSSISRHRFSMSGHYRSLQENVKLAMHLHSSKLCLAAYFGDM 50

The following BLAST results are available for this feature:
BLAST of Chy9G171450 vs.
Match NameE-valueIdentityDescription
BLAST of Chy9G171450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLY25.2e-17100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139520 PE=4 SV=1[more]
BLAST of Chy9G171450 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647804.11.10e-28100.00hypothetical protein Csa_000130 [Cucumis sativus][more]
BLAST of Chy9G171450 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G171450.1Chy9G171450.1mRNA