Chy9G170660 (gene) Cucumber (hystrix) v1

Overview
NameChy9G170660
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionE3 ubiquitin-protein ligase MARCH2 isoform X2
LocationchrH09: 15344569 .. 15346957 (+)
RNA-Seq ExpressionChy9G170660
SyntenyChy9G170660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTTGGATGGATTGCCATTCAAATGATGTAAAGGCCAAGCCCGGCGGGAATCAGAGCAATGAAGGCGACCTTGAGAAGCAGAGAGTTGCTCAACCATCATCATCAGCATTAGAGCTCTCTACCAGAGATGGTGATGATAATACACTCTTAACCATTGTTGTTTCTACAGGGGAGTCTAAACCAACCTCTGAGGTTCCTGGTCCTGGGACTCTTCGCTCTCAAGAAGAAGGGATATTGGCTTGTGCAGTTTCCCCAAAAAAGGAGCTCTTGTCTACTACTTCTGGTTCTGATGAGCAGTGCAGGTATATTTGAGTTGCTTCTCCTCCATTTAAAATGCATTTTCAATTGTTTTGTTCATTTCTGCTGCTACGTTTTGGCAGCACCTTTTTTAGTTAGTTCCTCCTTCCTCATACTTTTGTTATTTATGTTGTTTGTTCATTGTTTGTCATCCAAAAAACATTAGATAAACTCCTAAGTTTGCTTTTTGAAAATCGATACTTTATGTGGTTTGTTAATGGTTTGTTAAAACCACCACTAAATTGATAAGGTTAAGCCATGAATCAAATATTTGATCTATTTATGTAGATTGGGGAAGGAAATGACTTTGTTGGTGAGGTGAGTTTGACTGAATTCTAAAAGCTTAAGTTGATGGAAGATATTTAATTTGTCTGTCACAGTAAGATTAGAGCCGCAAACATGAGTATAATGGTTAAGGCATTTCCCTTGAGGTCGGAGGTTCAAGTCTTTACCACACATTTGTTGCACTAAAGACTAAAGAGAAAAGACTAAATCCCTATTTTTTTTACATTGTAGATGACACTTTTTCAAATATTGTTGTCTTTCCACTATTACTACTGGCTTCAATTATCTGGTTAATGTGTTGTAAAATGTAAAGGAAGTCGAGGCCATTAAGCCTGAGTACTATTATTCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGTATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTGCTTTTTTAGAGAATGCCATTTATTAAATTAAACCAATCATATCGTGTGTCAAGGGCATTTTGAAACGCAATTTGCTAAACTTTTCAGGGTTGTAGCGGCAAATGTATCATCTCCACAGTCACATCATGGTGTAGGTACTCTGTAGCTCTTGATGCAATGATTATGAACTTATAAAATGAAACGTCTCAATGAATACTGAATCAATTTTTTCGTCCTTTCTACAGTGTAAGCGTTATTAGTTGATGATCAGTGTCATGCTTTAGTTTTGCTTTATCTAATTGCTTTATTTAATTTATCATGACATTTCATCTGTAATCTTTGCTTCTGAGTGTTCCTTTTATTTTGAAGGGCTTTACAAAGTAGCATAGTGAATATTTCTAAATAATGTTTTGCTTACGAGATTTGAAATGAAACTCAATAAGAATTATAGGCAAGGACAACTACGACCTTACTTGAACAAGATTTATTCCGTAGGTTGTACAACTGTTTCCTTTTAAGTTCTAATACTTATAGGCAATGACCGCTGCTTCATCCTTCACAATTCTTCCTCTTCTTGGTGAATCAGAAATGTTGAGAAAGAGGAAAAGTGCAAAGTGGCAAAGATTCACTCGCCCACTAAACCACATCGAACAAAACCAAACTCATAAACTAAATAAATGGACATGAAAATTATTATGCTTCTGTTTTCTGTTTATAGTCTTTACCTTTCAAACTATTGATTCATGAGAAATGCAGTTTAGAACCTTACAATTTAACATTGAACTTATGATTCATGGATGTCATATCGAAATAACCTGAACTATGATTATTCCTTATTTGACATGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTATAGAACTCAAGATCCCCAAAGGGTAGCAAGATTTGATTTTGATTTTTCCAATGATATGCTTGTTCATTTGTTGTTAAAAAAACATGAAACATTCTTCATAATTGTTTATGCAACAGTACTGCTTCAGTCCACTTTGGTTGGCTTTTGCCATTCTCATAGGAGGTCTCCTACTAGATATTCTCATATCAATCACCCTCGGTGTTTCCGCATTGCCTGTAAATATCATCATCGGTACGTTTTCGTCGATCGATACCGAGCTATACTTCTTGTTTCTTGTCGAGATATTTATGGTTAGTGAAACTCTGAAGAACAGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCTTTGGAGTTCTTTCAGGAGTGGAATTCAGCAAGAGGATCACAAAGGGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG

mRNA sequence

ATGAACCTTTGGATGGATTGCCATTCAAATGATGTAAAGGCCAAGCCCGGCGGGAATCAGAGCAATGAAGGCGACCTTGAGAAGCAGAGAGTTGCTCAACCATCATCATCAGCATTAGAGCTCTCTACCAGAGATGGTGATGATAATACACTCTTAACCATTGTTGTTTCTACAGGGGAGTCTAAACCAACCTCTGAGGTTCCTGGTCCTGGGACTCTTCGCTCTCAAGAAGAAGGGATATTGGCTTGTGCAGTTTCCCCAAAAAAGGAGCTCTTGTCTACTACTTCTGGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGTATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCATCTCCACAGTCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTATAGAACTCAAGATCCCCAAAGGTACTGCTTCAGTCCACTTTGGTTGGCTTTTGCCATTCTCATAGGAGGTCTCCTACTAGATATTCTCATATCAATCACCCTCGGTGTTTCCGCATTGCCTGTAAATATCATCATCGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCTTTGGAGTTCTTTCAGGAGTGGAATTCAGCAAGAGGATCACAAAGGGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG

Coding sequence (CDS)

ATGAACCTTTGGATGGATTGCCATTCAAATGATGTAAAGGCCAAGCCCGGCGGGAATCAGAGCAATGAAGGCGACCTTGAGAAGCAGAGAGTTGCTCAACCATCATCATCAGCATTAGAGCTCTCTACCAGAGATGGTGATGATAATACACTCTTAACCATTGTTGTTTCTACAGGGGAGTCTAAACCAACCTCTGAGGTTCCTGGTCCTGGGACTCTTCGCTCTCAAGAAGAAGGGATATTGGCTTGTGCAGTTTCCCCAAAAAAGGAGCTCTTGTCTACTACTTCTGGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGTATAGATACTTGGTTTCGTACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCATCTCCACAGTCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTATAGAACTCAAGATCCCCAAAGGTACTGCTTCAGTCCACTTTGGTTGGCTTTTGCCATTCTCATAGGAGGTCTCCTACTAGATATTCTCATATCAATCACCCTCGGTGTTTCCGCATTGCCTGTAAATATCATCATCGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCTTTGGAGTTCTTTCAGGAGTGGAATTCAGCAAGAGGATCACAAAGGGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG

Protein sequence

MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQRYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSARGSQRVESNVTIGYFPAI*
Homology
BLAST of Chy9G170660 vs. ExPASy TrEMBL
Match: A0A0A0KQJ1 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G146840 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.8e-142
Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           MNL MDCHSNDVKAK GGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE
Sbjct: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTLRSQEE ILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSARGSQRVESNVTIGYFPAI 263
           WNS+RGSQRVESNVTIGYFPAI
Sbjct: 241 WNSSRGSQRVESNVTIGYFPAI 262

BLAST of Chy9G170660 vs. ExPASy TrEMBL
Match: A0A1S3AU35 (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.0e-134
Identity = 247/262 (94.27%), Postives = 247/262 (94.27%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M L MDCHSNDVKA  G NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEEG LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSARGSQRVESNVTIGYFPAI 263
           WNSAR SQRVESNVTIGYFPAI
Sbjct: 241 WNSARVSQRVESNVTIGYFPAI 261

BLAST of Chy9G170660 vs. ExPASy TrEMBL
Match: A0A5A7TM25 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001330 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 247/263 (93.92%), Postives = 247/263 (93.92%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M L MDCHSNDVKA  G NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEEG LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRT GSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTIGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 R-YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
           R YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 RQYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSARGSQRVESNVTIGYFPAI 263
           EWNSARGSQRVESNVTIGYFPAI
Sbjct: 241 EWNSARGSQRVESNVTIGYFPAI 262

BLAST of Chy9G170660 vs. ExPASy TrEMBL
Match: A0A1S3AU77 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132
Identity = 247/263 (93.92%), Postives = 247/263 (93.92%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M L MDCHSNDVKA  G NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEEG LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 R-YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
           R YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 RQYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSARGSQRVESNVTIGYFPAI 263
           EWNSAR SQRVESNVTIGYFPAI
Sbjct: 241 EWNSARVSQRVESNVTIGYFPAI 262

BLAST of Chy9G170660 vs. ExPASy TrEMBL
Match: A0A1S4E4V2 (E3 ubiquitin-protein ligase MARCH9 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.8e-117
Identity = 228/262 (87.02%), Postives = 229/262 (87.40%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M L MDCHSNDVKA  G NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEEG LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHG                  
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG------------------ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           +YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 QYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSARGSQRVESNVTIGYFPAI 263
           WNSAR SQRVESNVTIGYFPAI
Sbjct: 241 WNSARVSQRVESNVTIGYFPAI 243

BLAST of Chy9G170660 vs. NCBI nr
Match: XP_004145881.1 (E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >XP_031742128.1 E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >KGN49961.1 hypothetical protein Csa_000267 [Cucumis sativus])

HSP 1 Score: 513 bits (1320), Expect = 4.79e-183
Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           MNL MDCHSNDVKAK GGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE
Sbjct: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTLRSQEE ILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSARGSQRVESNVTIGYFPAI 262
           WNS+RGSQRVESNVTIGYFPAI
Sbjct: 241 WNSSRGSQRVESNVTIGYFPAI 262

BLAST of Chy9G170660 vs. NCBI nr
Match: XP_008437468.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis melo])

HSP 1 Score: 484 bits (1246), Expect = 8.81e-172
Identity = 247/262 (94.27%), Postives = 247/262 (94.27%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M L MDCHSNDVKA  G NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEEG LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSARGSQRVESNVTIGYFPAI 262
           WNSAR SQRVESNVTIGYFPAI
Sbjct: 241 WNSARVSQRVESNVTIGYFPAI 261

BLAST of Chy9G170660 vs. NCBI nr
Match: KAA0042631.1 (E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo var. makuwa] >TYK06032.1 E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 480 bits (1235), Expect = 4.34e-170
Identity = 247/263 (93.92%), Postives = 247/263 (93.92%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M L MDCHSNDVKA  G NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEEG LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRT GSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTIGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 R-YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
           R YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 RQYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSARGSQRVESNVTIGYFPAI 262
           EWNSARGSQRVESNVTIGYFPAI
Sbjct: 241 EWNSARGSQRVESNVTIGYFPAI 262

BLAST of Chy9G170660 vs. NCBI nr
Match: XP_008437466.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_016903259.1 PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo])

HSP 1 Score: 479 bits (1234), Expect = 6.16e-170
Identity = 247/263 (93.92%), Postives = 247/263 (93.92%), Query Frame = 0

Query: 1   MNLWMDCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M L MDCHSNDVKA  G NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEEG LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 R-YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
           R YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 RQYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSARGSQRVESNVTIGYFPAI 262
           EWNSAR SQRVESNVTIGYFPAI
Sbjct: 241 EWNSARVSQRVESNVTIGYFPAI 262

BLAST of Chy9G170660 vs. NCBI nr
Match: XP_038875309.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida])

HSP 1 Score: 475 bits (1222), Expect = 3.59e-168
Identity = 240/257 (93.39%), Postives = 245/257 (95.33%), Query Frame = 0

Query: 6   DCHSNDVKAKPGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTS 65
           DCHSNDVKA  G NQ+N+GDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKP S
Sbjct: 3   DCHSNDVKANTGANQNNDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPIS 62

Query: 66  EVPGPGTLRSQEEGILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLA 125
           EVPG GTL SQE G+L C VSPKKELLSTTS SDEQCRICQQEKEEVLIELGC+CRGGLA
Sbjct: 63  EVPGVGTLCSQE-GLLPCEVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCNCRGGLA 122

Query: 126 KAHRTCIDTWFRTKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQRYCFS 185
           KAHRTCIDTWFRTKGSNRCEICQVVAANVS PQSHHGTNYWIWRIDPTYRTQDPQR+CFS
Sbjct: 123 KAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRHCFS 182

Query: 186 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSAR 245
           PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS R
Sbjct: 183 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTR 242

Query: 246 GSQRVESNVTIGYFPAI 262
           GSQRVESNVTIGYFPAI
Sbjct: 243 GSQRVESNVTIGYFPAI 258

BLAST of Chy9G170660 vs. TAIR 10
Match: AT2G45530.1 (RING/U-box superfamily protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.2e-70
Identity = 143/251 (56.97%), Postives = 175/251 (69.72%), Query Frame = 0

Query: 19  NQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSEVPGPGTLRSQEE 78
           + S   DLEKQ+  Q    + +  +   +++  LTIVV  G+S             S+EE
Sbjct: 5   SSSGGDDLEKQQQQQQKDKSPQKQSESANESNHLTIVVCNGDS-------------SREE 64

Query: 79  GILACAVSPKKEL-LSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFR 138
             L   + P+KE+ LS    S EQCR+C Q+KEEVLIELGC CRGGLAKAHR+CID WFR
Sbjct: 65  --LVGQIPPEKEVSLSRNGSSHEQCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFR 124

Query: 139 TKGSNRCEICQVVAANVSSPQSHHGTNYWIWRIDPTYRTQDPQRYCFSPLWLAFAILIGG 198
           TKGSN+CEICQVVA NV+ P++   TNYW+WRIDP+YR ++ +R CFSPLW+AF+ILIGG
Sbjct: 125 TKGSNQCEICQVVAVNVTPPETQPTTNYWVWRIDPSYRQEERERGCFSPLWVAFSILIGG 184

Query: 199 LLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSA----RGSQRVESN 258
           L+LD+LISITLGVSALPVNIIIGVIVVLGLGT  RL LEF  EW+      R  QR E+N
Sbjct: 185 LMLDVLISITLGVSALPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRAVHRAVQRAEAN 240

Query: 259 --VTIGYFPAI 263
               I Y PA+
Sbjct: 245 NFSNIAYPPAL 240

BLAST of Chy9G170660 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-11
Identity = 33/72 (45.83%), Postives = 40/72 (55.56%), Query Frame = 0

Query: 95  TSGSDEQCRICQQEKEEV---LIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVA 154
           T+  ++ CRIC    E      IELGC C+  LA AHR C +TWF+ KG   CEICQ VA
Sbjct: 77  TAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVA 136

Query: 155 ANVSSPQSHHGT 164
            NV       G+
Sbjct: 137 RNVGGANEMVGS 148

BLAST of Chy9G170660 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 9.7e-11
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0

Query: 96  SGSDEQCRICQQE------KEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQV 155
           S S+  CRIC         +  V IELGC C+  LA AH+ C +TWF+ KG+  CE+C  
Sbjct: 73  SQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGS 132

BLAST of Chy9G170660 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0

Query: 99  DEQCRICQQEKEE-----VLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAAN 158
           DE+    ++E+EE     + ++LGC C+G L  AH  C +TWF+ KG+  CEIC  +A N
Sbjct: 110 DEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALN 169

Query: 159 VSSPQSH 161
           V+  QS+
Sbjct: 170 VAGEQSN 176

BLAST of Chy9G170660 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0

Query: 93  STTSGS-----DEQCRICQQEKEEVLIE------LGCHCRGGLAKAHRTCIDTWFRTKGS 152
           S  SGS     ++ CRIC    E    E      LGC C+  L   H+ C DTWF+ KG+
Sbjct: 64  SVASGSIRGSPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGN 123

Query: 153 NRCEICQVVAAN 154
             CEIC+ +A N
Sbjct: 124 KTCEICRSIAQN 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KQJ11.8e-14298.09RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G14684... [more]
A0A1S3AU357.0e-13494.27E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A5A7TM251.3e-13293.92E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3AU771.7e-13293.92E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A1S4E4V27.8e-11787.02E3 ubiquitin-protein ligase MARCH9 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
Match NameE-valueIdentityDescription
XP_004145881.14.79e-18398.09E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >XP_031742128.1 E3 ubiquiti... [more]
XP_008437468.18.81e-17294.27PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis melo][more]
KAA0042631.14.34e-17093.92E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo var. makuwa] >TYK060... [more]
XP_008437466.16.16e-17093.92PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_0169... [more]
XP_038875309.13.59e-16893.39E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT2G45530.13.2e-7056.97RING/U-box superfamily protein [more]
AT2G37950.11.2e-1145.83RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G05830.19.7e-1144.62RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G59000.11.1e-0941.79RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G01070.21.6e-0840.28RING/FYVE/PHD zinc finger superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 101..148
e-value: 3.9E-15
score: 66.3
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 102..147
e-value: 8.2E-11
score: 41.9
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 94..154
score: 19.313353
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 96..150
e-value: 2.3E-14
score: 55.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..44
NoneNo IPR availablePANTHERPTHR46214ZINC FINGER, RING-CH-TYPEcoord: 21..261
NoneNo IPR availablePANTHERPTHR46214:SF16E3 UBIQUITIN-PROTEIN LIGASE MARCH11 ISOFORM X1coord: 21..261
NoneNo IPR availableCDDcd16495RING_CH-C4HC3_MARCHcoord: 102..148
e-value: 1.73479E-13
score: 61.5744
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 98..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G170660.1Chy9G170660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding