Chy9G165140 (gene) Cucumber (hystrix) v1

Overview
NameChy9G165140
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH09: 10672836 .. 10673501 (-)
RNA-Seq ExpressionChy9G165140
SyntenyChy9G165140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAATAGGTAAAATGTATTTGAGGGGCATTTTCATCTTTTACCTTGAAATTTAATTAAAATTTGCCATATTTACAATTCTTTTAAAGATTTGCTACATCCTTAATTAATTTATAGTAATTTGTTATATTCCCGGTTAGCCCTAATTTTTATAATTTCCCATTTCAACCAATTTCAAAAGTATGAAAAACAAATCCTAAAAAGTTAATTCCACAGAAACGATATGTCGATTAAACAATGGAAAGGAAACGTGGTGCGAATATGCGATACGATGAGTCGAAATAGAGTATTGTAAAAGTACCAAATTCTTAAACCAAAACCGGAACCGCAAGGTTGGGATCGAAAATGGAAGCCCTGATTTAGAGGCTAATCAAAATCCGACAAAATTGAAGGCATTAGAGAGAAATTTAAAGGAAAATAGAGATGATTCAAGTTGTATTGAAGCTTGTATTGGCCGAAATGGCTTTGATTTTGGCTCTGTTGTTCAAAAATCCATTGAGAAATTTGATAGTGAAGGGATTGGACAGATTGAAACAGGGAGGAGGTCCTTTGGTGGTGAAGTCCGTCGCCGCCACGATGTTGGTCGTCTTTGCCTCAGCCCTTTACAATGCGGCAGCAATCAACCGGCTAGTGGCGGAGGCCGGCATCCTCAACCAGACTGA

mRNA sequence

ATGAAAGGAATAGAGTATTGTAAAAGTACCAAATTCTTAAACCAAAACCGGAACCGCAAGGTTGGGATCGAAAATGGAAGCCCTGATTTAGAGGCTAATCAAAATCCGACAAAATTGAAGGCATTAGAGAGAAATTTAAAGGAAAATAGAGATGATTCAAGTTGTATTGAAGCTTGTATTGGCCGAAATGGCTTTGATTTTGGCTCTGTTGTTCAAAAATCCATTGAGAAATTTGATAGTGAAGGGATTGGACAGATTGAAACAGGGAGGAGGTCCTTTGGTGGTGAAGTCCGTCGCCGCCACGATGTTGGTCGTCTTTGCCTCAGCCCTTTACAATGCGGCAGCAATCAACCGGCTAGTGGCGGAGGCCGGCATCCTCAACCAGACTGA

Coding sequence (CDS)

ATGAAAGGAATAGAGTATTGTAAAAGTACCAAATTCTTAAACCAAAACCGGAACCGCAAGGTTGGGATCGAAAATGGAAGCCCTGATTTAGAGGCTAATCAAAATCCGACAAAATTGAAGGCATTAGAGAGAAATTTAAAGGAAAATAGAGATGATTCAAGTTGTATTGAAGCTTGTATTGGCCGAAATGGCTTTGATTTTGGCTCTGTTGTTCAAAAATCCATTGAGAAATTTGATAGTGAAGGGATTGGACAGATTGAAACAGGGAGGAGGTCCTTTGGTGGTGAAGTCCGTCGCCGCCACGATGTTGGTCGTCTTTGCCTCAGCCCTTTACAATGCGGCAGCAATCAACCGGCTAGTGGCGGAGGCCGGCATCCTCAACCAGACTGA

Protein sequence

MKGIEYCKSTKFLNQNRNRKVGIENGSPDLEANQNPTKLKALERNLKENRDDSSCIEACIGRNGFDFGSVVQKSIEKFDSEGIGQIETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD*
Homology
BLAST of Chy9G165140 vs. ExPASy TrEMBL
Match: A0A6J1GRP2 (uncharacterized protein LOC111456500 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456500 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.8e-06
Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 0

Query: 86  IETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 130
           IE G R+FGG+ R RH  G L L+ LQCG N PA+GGGR PQPD
Sbjct: 9   IEAGERAFGGQDRCRHHAGALRLNSLQCGGNPPANGGGRLPQPD 52

BLAST of Chy9G165140 vs. ExPASy TrEMBL
Match: A0A6J1JSK9 (uncharacterized protein LOC111487467 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487467 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.0e-05
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 0

Query: 86  IETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 130
           IE G R+F GE R RH  G L L+ LQC  N PA+GGGR PQPD
Sbjct: 9   IEAGERAFDGENRCRHHAGALRLNSLQCSGNPPANGGGRLPQPD 52

BLAST of Chy9G165140 vs. NCBI nr
Match: KAE8648541.1 (hypothetical protein Csa_009351 [Cucumis sativus])

HSP 1 Score: 223 bits (567), Expect = 2.38e-69
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0

Query: 21  VGIENGSPDLEANQNPTKLKALERNLKENRDDSSCIEACIGRNGFDFGSVVQKSIEKFDS 80
           VGIENGSPDL+ANQNPTKLKALERNLKENRDDSSCIEACIGRNGFDFGSVVQKSIEKFDS
Sbjct: 262 VGIENGSPDLKANQNPTKLKALERNLKENRDDSSCIEACIGRNGFDFGSVVQKSIEKFDS 321

Query: 81  EGIGQIETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 129
           EGIGQIETG RSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD
Sbjct: 322 EGIGQIETGERSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 370

BLAST of Chy9G165140 vs. NCBI nr
Match: KAG6602373.1 (hypothetical protein SDJN03_07606, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 2.05e-13
Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 0

Query: 74  SIEKFDSEGIGQIETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 129
           SI+K  ++ IGQIE G R+FGGE R RH  G L L+ LQCG N PA+GGGR PQPD
Sbjct: 45  SIQKAHNQWIGQIEAGERAFGGENRCRHHAGALRLNSLQCGGNPPANGGGRLPQPD 100

BLAST of Chy9G165140 vs. NCBI nr
Match: XP_023514673.1 (uncharacterized protein LOC111778900 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 69.3 bits (168), Expect = 4.54e-12
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0

Query: 74  SIEKFDSEGIGQIETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 129
           SI+K  ++ IGQIE G R+FGG+ R RH    L L+ LQCG N PA+GGGR PQPD
Sbjct: 45  SIQKAHNQWIGQIEAGERAFGGQDRCRHHASALRLNSLQCGGNPPANGGGRLPQPD 100

BLAST of Chy9G165140 vs. NCBI nr
Match: XP_022954165.1 (uncharacterized protein LOC111456500 isoform X2 [Cucurbita moschata])

HSP 1 Score: 61.2 bits (147), Expect = 1.97e-09
Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 0

Query: 86  IETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 129
           IE G R+FGG+ R RH  G L L+ LQCG N PA+GGGR PQPD
Sbjct: 9   IEAGERAFGGQDRCRHHAGALRLNSLQCGGNPPANGGGRLPQPD 52

BLAST of Chy9G165140 vs. NCBI nr
Match: XP_022990644.1 (uncharacterized protein LOC111487467 isoform X2 [Cucurbita maxima])

HSP 1 Score: 57.4 bits (137), Expect = 6.19e-08
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 0

Query: 86  IETGRRSFGGEVRRRHDVGRLCLSPLQCGSNQPASGGGRHPQPD 129
           IE G R+F GE R RH  G L L+ LQC  N PA+GGGR PQPD
Sbjct: 9   IEAGERAFDGENRCRHHAGALRLNSLQCSGNPPANGGGRLPQPD 52

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GRP22.8e-0663.64uncharacterized protein LOC111456500 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JSK94.0e-0561.36uncharacterized protein LOC111487467 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
KAE8648541.12.38e-6998.17hypothetical protein Csa_009351 [Cucumis sativus][more]
KAG6602373.12.05e-1362.50hypothetical protein SDJN03_07606, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023514673.14.54e-1258.93uncharacterized protein LOC111778900 [Cucurbita pepo subsp. pepo][more]
XP_022954165.11.97e-0963.64uncharacterized protein LOC111456500 isoform X2 [Cucurbita moschata][more]
XP_022990644.16.19e-0861.36uncharacterized protein LOC111487467 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..37

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G165140.1Chy9G165140.1mRNA