Chy9G165010 (gene) Cucumber (hystrix) v1

Overview
NameChy9G165010
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionalpha/beta-Hydrolases superfamily protein
LocationchrH09: 10517456 .. 10519628 (+)
RNA-Seq ExpressionChy9G165010
SyntenyChy9G165010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGATCCATCAATACTGAAAGCCCTAATTTTTCATTGGGGTGGATTTGATAGCAATGCGTATTCCTTTCCCCACATTGAGAGGTGGAAGAAGAAATTGAGGGTACAGAAGAAGATTTCTCTTATTCGTATGCCTCATCTCTCTTTTCCTCTTTTTGCTTTCTTCTCTTTTCAATTTCCGAGTATCTGTGTAATAGGAATAGTTTGTGAAATTTTGTTCGCTCGTCTTTTTTGTTTGGTGCTAATTTGTTTTGATTGTTAGTGCATTTCTGGTTCTTGTTTTTCTATTTTGCTAGAAGTTGAAATCAATGTTGTTTGTAAGGATGACAAGCTTTAGAGGGAGAGTTAGTTCCTTGCATGGAGTAAAACTAACATTGTTGGTAGAATTATAAGCCAGGTTTATTTCATATGTATGTTTATGTAGTCTTTTTAATTTATGTCTTTTAAATGCCTTTGTTATCAGATCAAACAAGGTTAAGGTTCTCCTGCGTATTTTCTTGGGTATATACTGCAAGAGAACAAATTTATTTTCTTTATATTGTTTATTTATTGTGTTTTTATCTGTACTTCCAACATAGTGTAATCGATGGTTAAGTCATTTTTGTCATTGCAATGTTCACTATAGTAATAACACTGATTTTAATGCTTATAAGATATATGATATCTGGTATGTAAGTTACGTTCCCAACATTGGAGTTGTTAAGACAAGGCATGCCAGTGAAGACTCGGGTATGTGCTTAGTTATAATTGATAATTTTTTTTCAACTGAGACCTTGGTACGTAAACATCAATTTTGCTAGAATTAGAAATGAAATTTTGGATTTTGATCCCACTTTACTCAGAAAGAAGCTAGTCATGTTGAGGGATTTAGTCGGAACTATCTTTTTCTTGTGTGTGTTTATCAGTTGAGTACAAGTTTTGGTATAAAAGAGGTATTTTAACTTTTGTTTTCTTCTTCCTTTGTATGTTGTCAACTGCGTTGAAGTAGTAAGGCAAGTTTTTCACAGCGCAGGAAACAAATAAGAGCCACTAGAATCTTTTTTCTAAATTATTTATTGATTTCATCACATGTGAATGTATATATGATCATATGTACTCTTTAACTTTTTTTTTATAGCCACGTAGTTCCCTCTAACTTCTCCTATAAATATGTGCAGTAATGAAGAGGCTTAAAATCTGCTAGGAGAGAAAAAAAAAAACAAATTTTCAATTCAATTAGGTAAGAGATTAAAAGAAAGATAATGAATAGTAGTTGTCTGCAGAGTTGGCCGGAGCCGGAGGTGTGTGTGCAGTCGCTGGCAGAGAGTGGAATAAGTAAAATTATTTACATCTCTGTATATCTAAATATTTTTCTTGTTTGATTTTTTTTTTTTTTTGGGTGGGGTGCTAGACTTGAACATGTTATTAAATTTATCTATTGACTTTTCAATTTGAAGGATGGATTTAGTATAGATGAAGGATGGGTTTTCCATTGATTTAGTATATAAGGGAAAGTTTCCATATATGATTTCTCCTTTTCATTTTCTTTAATTTTTCAAAAGGGAACTCACAAATCTCTTGGTATGCTAAGAAGAAAGCCTTTTGCTATGCTAAAAAATAAAATTTTTTGTTTACAACATCTTCCTTAATGTAAATCTACATTTTCCATTTTTTTGTTATTCCTTAAGAACTTGCTTGTTGTTCTCGAATCAGTGCTCAACCATTTTTTGTTCATCATGAAGGGATAAATTCAGTTGTTACAGATAAAGTTCTGTTTGTTTTTTAAATTGACGTGGTCTAGAGTATTTGGTTTGAAAGAAATCAGATGTTTTTTAAGAATAAAAGGGTTTCTTAGGAGGAAAGCTAATGTGCACATGGCCTTTTGAGTTCTTTCTAAAGCTTATTGATATTCAGTTTTTTAGTTTAATTCCTGTGGGGTAATTTGCTTGTTTTTGTATGTAATTTTTAGTTTTGGTTTTGGGCTTCCTTGTTTCTAGTTATTACTACTAATAGTTGTCCTTAGATTGTAAATTTAATTATCGATAGAATTTTTTTTCCCTCTCATTTTTACTTTATTTGATTGTTTTTGTTTAGAATGATTTCTTGCCAATAACTGCCACACCCTTGGAAGATATATTCAAGTCAATCTTTTGGTATGTGTCACTTTTGAGCTAACTTTTTTGGATCTATGA

mRNA sequence

ATGGTAGATCCATCAATACTGAAAGCCCTAATTTTTCATTGGGGTGGATTTGATAGCAATGCGTATTCCTTTCCCCACATTGAGAGGTGGAAGAAGAAATTGAGGAATGATTTCTTGCCAATAACTGCCACACCCTTGGAAGATATATTCAAGTCAATCTTTTGGTATGTGTCACTTTTGAGCTAACTTTTTTGGATCTATGA

Coding sequence (CDS)

ATGGTAGATCCATCAATACTGAAAGCCCTAATTTTTCATTGGGGTGGATTTGATAGCAATGCGTATTCCTTTCCCCACATTGAGAGGTGGAAGAAGAAATTGAGGAATGATTTCTTGCCAATAACTGCCACACCCTTGGAAGATATATTCAAGTCAATCTTTTGGTATGTGTCACTTTTGAGCTAACTTTTTTGGATCTATGA

Protein sequence

MVDPSILKALIFHWGGFDSNAYSFPHIERWKKKLRNDFLPITATPLEDIFKSIFWYVSLLS*LFWIYX
Homology
[Close]
BLAST of Chy9G165010 vs. ExPASy TrEMBL
Match: A0A0A0KLI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G091390 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.9e-16
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1  MVDPSILKALIFHWGGFDSNAYSFPHIERWKKKLRNDFLPITAT 45
          M DPSILKALIF+WGGFDSNAYSFPHIERW+KKLRNDFLP TAT
Sbjct: 1  MADPSILKALIFYWGGFDSNAYSFPHIERWQKKLRNDFLPRTAT 44

[Close]
BLAST of Chy9G165010 vs. NCBI nr
Match: KAE8648277.1 (hypothetical protein Csa_017796 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 1.31e-22
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MVDPSILKALIFHWGGFDSNAYSFPHIERWKKKLRNDFLPITATPLE 47
          M DPSILKALIF+WGGFDSNAYSFPHIERW+KKLRNDFLP TAT + 
Sbjct: 1  MADPSILKALIFYWGGFDSNAYSFPHIERWQKKLRNDFLPRTATSVN 47

[Close]
BLAST of Chy9G165010 vs. NCBI nr
Match: XP_012090236.1 (uncharacterized protein LOC105648455 isoform X1 [Jatropha curcas])

HSP 1 Score: 48.5 bits (114), Expect = 2.30e-04
Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 0 

Query: 34  LRNDFLPITATPLEDIFKSIFWYVSLL 60
           L++DFLP TATPLEDIFKS+FWY SLL
Sbjct: 234 LQDDFLPRTATPLEDIFKSLFWYGSLL 260

[Close]
BLAST of Chy9G165010 vs. NCBI nr
Match: PPD89427.1 (hypothetical protein GOBAR_DD13630 [Gossypium barbadense])

HSP 1 Score: 47.4 bits (111), Expect = 5.91e-04
Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 0 

Query: 32  KKLRNDFLPITATPLEDIFKSIFWYVSLLS 61
           KK  +DFLP TATPLEDIFKS+FWY   LS
Sbjct: 256 KKFGDDFLPRTATPLEDIFKSVFWYGWTLS 285

[Close]
BLAST of Chy9G165010 vs. NCBI nr
Match: KAF2300546.1 (hypothetical protein GH714_013992 [Hevea brasiliensis])

HSP 1 Score: 47.0 bits (110), Expect = 8.01e-04
Identity = 20/28 (71.43%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 34  LRNDFLPITATPLEDIFKSIFWYVSLLS 61
           L++DFLP T TPLEDIFKSIFW+++LL+
Sbjct: 186 LQDDFLPRTPTPLEDIFKSIFWFLALLA 213

[Close]
BLAST of Chy9G165010 vs. NCBI nr
Match: XP_040861380.1 (uncharacterized protein LOC100776475 isoform X1 [Glycine max] >RCW19249.1 hypothetical protein GLYMA_09G136700v4 [Glycine max] >RZB91942.1 hypothetical protein D0Y65_024094 [Glycine soja])

HSP 1 Score: 47.0 bits (110), Expect = 8.09e-04
Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 34  LRNDFLPITATPLEDIFKSIFWYV 57
           L++DFLP TATPLEDIFKS+FWYV
Sbjct: 234 LQDDFLPRTATPLEDIFKSLFWYV 257

[Close]
BLAST of Chy9G165010 vs. TAIR 10
Match: AT3G49050.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 40.0 bits (92), Expect = 8.7e-04
Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0 

Query: 34  LRNDFLPITATPLEDIFKSIFWYVSLL 61
           L++DFLP TATPLEDIFKS+F    LL
Sbjct: 235 LQDDFLPRTATPLEDIFKSVFCLPCLL 261

[Close]
BLAST of Chy9G165010 vs. TAIR 10
Match: AT5G37710.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 40.0 bits (92), Expect = 8.7e-04
Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0 

Query: 34  LRNDFLPITATPLEDIFKSIFWYVSLL 61
           L++DFLP TATPLEDIFKS+F    LL
Sbjct: 233 LQDDFLPRTATPLEDIFKSVFCLPCLL 259

The following BLAST results are available for this feature:
BLAST of Chy9G165010 vs.
Match NameE-valueIdentityDescription
BLAST of Chy9G165010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLI45.9e-1690.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G091390 PE=4 SV=1[more]
BLAST of Chy9G165010 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648277.11.31e-2285.11hypothetical protein Csa_017796 [Cucumis sativus][more]
XP_012090236.12.30e-0481.48uncharacterized protein LOC105648455 isoform X1 [Jatropha curcas][more]
PPD89427.15.91e-0473.33hypothetical protein GOBAR_DD13630 [Gossypium barbadense][more]
KAF2300546.18.01e-0471.43hypothetical protein GH714_013992 [Hevea brasiliensis][more]
XP_040861380.18.09e-0483.33uncharacterized protein LOC100776475 isoform X1 [Glycine max] >RCW19249.1 hypoth... [more]
BLAST of Chy9G165010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49050.18.7e-0470.37alpha/beta-Hydrolases superfamily protein [more]
AT5G37710.18.7e-0470.37alpha/beta-Hydrolases superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G165010.1Chy9G165010.1mRNA