Chy9G164180 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G164180
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transcription initiation factor IIF subunit beta
Location	chrH09: 9408872 .. 9422917 (-)
RNA-Seq Expression	Chy9G164180
Synteny	Chy9G164180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTCGACGGCAAATCCATCGACCGTTCCACTTCCAGAAAACACCAAACCAATAAAAACAACATCGTTGTTGGAACCGACTTCTTAGAGACTAACAAGGCGGACAGAGCAATGTGGCTCTTGAAATGTCCCCAAGTTGTTACTCGCGCCCTTTCTAATTCACCTGATGCCCCTTCCCGTCCTGTCGCTAAGGTCATCGTTTCTGTTGACCCACTTCAATCCAATGACGATGATGATTCTTCCTCTACTGAGGTATATGATTACCTCCTGCTTTGGTGTTTGTGGTTTTCCATTGAGGCCTCTCTTCTTATTGCATTTTGTGATGTTTCTTACCTGCTTCTGCATGCCTTCCGTTTTAGGTTGGCTTGCTGTTTTTTTTTTTTTTTTTTTTTCCTTTTATGTTTCGTTTTATATTCTCTGTATCTTAGGGCTTTGTGTTCGTTTCTGTTTATGCATTTTCCGTTTTTTTTGTTATAATCCTTTGGAGCTATTCGTTGATTACTCGGACTGCATTTTTTTTTTTTTTTGATCTTTTTGTTCTTTTCTTGTTTCACTGGTAATGGAAAGTTTTGTTGTTTGTTAAAGTTTCAATGACATGTGGTTAGTCTAATTTGTTTTTTCACTATTGCGTTCTTATGATGCTTTTCTATGAATATGACCCTTCCGGTTTACATGCTTGGTTTCCTAACTACTAACTGTATTTGGGTAGGATTGCAGTTTTCAGAATATGGGGGGATCGGGAATTTTTGGAGATTAGAAAAAAAAACAAAGTAATTTAATGGTAGTTTTTTTATTACTCTTCACTGACTAAAGGGTAGGTGCATTTTCTAACTACAAGCTGTTGTTAGTGATCACTATCAGTCCCCATTTTCTCGTCTTTAACCTGCTTTGAGCCTATAACCTAATGGTTCGGGTCTATGCTCTTGGTCGTGAATATTTCCTCACCTTTTTTTCAAAATATTTTGTTTGAGCCGTGGATGGGGCACAATTTGCACATTGTTACGTTCATGATGTCTTGGACTCCGAGGCAGGGTTTCAATGTGTCAAACTTAAAACTTCAAATGTTTCATGATCTCTACCTTCTGCTCCCAAGTCACTCATTGAGAAATTGGTGATCCATTGTTTAAATTCTATGTAACTGAAGGGTATAATAGATTGATTCTTATTTCAACAACTAGGTTGGTGGGTTCTGCATCGCAAGGTAAATTATCTGGTTTCTTTCTTTTAAAATGGTACTCACTGGGTGTATGAATTGAATGACATTTCTTTTAAAATGGTAGCACATTTGTTAACTGCCTCATGTACGTTGAGCTAGGTACTCTGAAGTTTGGTTAGAGGATGGCACTGCCCCCCAAGGGCTCATCGTATTCTCCACCATGAATTAGGAACCTTGGATGTTACAGTTTTACCTTAAATTTTATTTTATGTTTGATGGTTATTGTTTGTTTTATATTTTATATCCTGGGTAGGTGGGGGGTAATGGATGGAAAATCTGGGAGTAGGTCTGTTCAGCTGGGTATAAGCTCATAAGATTCTAAAGTATTTGAGGATAAGTTTGCTGAACCTGGAGTTCAGTGCGATTGAATGTAACAATGACTTGTCATTTTTAGCTGGGGAACTATTAAAATATTTTTTGCATCTGTATGGCTGTATATGTGCTAGCACTAGCAGCCTCATGCTGACAGCAATTCTACACTGTATACCTTCTTGGAGTATAGTGATAGCCACTTTTAGTTGGTCTGGTATAAGGTCAATTTTATTTATTTATTTAATGCAGTGGGTGGATGGTGCAAATCCACCTATTTATGTTATTTAAGTTCTACAGGTTTTCTTACAACCAAATTGTATAGGGTCATGTGATTGTCCTATAAATTTAGTTGACATCTTTGTAAGTTAGCTTGGTTGCTTTGATACTCACACTTTGAAGAAAAAATATCTTAAAGTAATAACAATACTAATCTTTAGATTGTGAAATACTATATTATAAACTAAGTCACTGTTTAAAATTTCTTGCTATCGTCTGAAGGGAAACCAATCGTATTTTCCCTCTAGTTTATTAGCACGTTAAATAAGATGCCCTGTGGAATAGTTGTGACTTGTAAATGGTTTTAGCTAAAACTTACAAGACCTTTGGTTTGACTGCATGGAAGGAGGCTTAGGAGCCTTTTAGTAAGAAAATATATGTTTATCACAATTTGACTGATGACTCATTGCCAATTTGTAGTACTAGCCATGTCATATTAATGATTTTCTTGCTCTTTTTTAAAAATGAAACGAGCCTCTTCATTAATATAATGAAATGAGACTAATGCTCAAAGTACAAGAGAATTATACAAAGAGTTTGAATCTCTAAGGGTGCGTTTGGGGGAGGGAAAGAGTTATGGGGAAAAAGGATTACGATAATCCTAGGATTACGATAACCCTAGGATTACGATAACCCTAGGTTATGATAATATGTGTTTGGGGAAAAGTTTATTATTGGTAGTGTTATGATAATATGTGTTTGGTGGAACGATTATGAATGATAGTGTTATGATAGTATGTGTTTTGGGGGAAGGAATATAATAGGTAGTATTATGATAATATTTGTGTGGGTGATGGATTGTGTGGGAAGGATTGTGAAAATTATTATTATTATTAAGGTAGGATTGAGGTAGGGTTGAGCTAGGGTTGATGTAGGGTTGAAGTAGGGTTGAGGGGGTTGGGGAAGGGTCCCAAACAAGGAAAGATACCTTTCCTCCATAATCTTTTCCCTCCCCCAAACACACCGGGACAAAGAATCCATAATTCAAATACACAGACTAACAAAATGAGGACCAAGAGTTTAACAAAGACGAAACGAGGCAGAAAACAATCAAAACAGCAACTGAAAATACATTTAGTACAAATGAAACGTTGGGAAAGGAAACAAAAGTGCTCCAATGAACCATAACCATTAAAGAAGTAAACTTTGAAGAGCTTGAAGAAGATGCATCACAAGAGGACTAGTGTTTTGAATAGGTGAGGCGCATTGAGGAAGGCACCCGCCTTTGCATGCCTTCCACAAAGTGCTGAGGTGTGCTTAAGCGCGGTGACTATTAGGGTTTTTGTATTTCTTTTTCACAAATCCATAATTTTTTTTAACGGAGACAAGCTTCTTATATTAATAATAGAATCTCAAGGTACAAGAGAATTATACAATGAAAATAATAGAGAAGCCATAAAAGAGAGAGAGCAAGATAGGATCAGGAGGCGCACCCAGACATCTGAACTAGGTTAACACTCCCTTAGCGTCATCATCATGTCCAAAATAAAAGAAACCGAAAACAAATACAAATCAAATAGTCCGGGAACACACAGCCACAGAAGAAACAAAGACAGAAACCAAAATAAAAAAGCAGGTACAATGGAGGGAAAATACAGAATGCCCTCAAAGATAATCTCCTATATCTATCAAAACTGAATAAGAGGTCCTCTAAAACATCAAAGGCCATAAAGATGCAAAAACTTGGTCTTCTTAGAACTTCAGGAAAATCAGCCCCCATTAGAGTGGTTGATAAATGAAAGCTGCCCAGTCTAAACAAACATTCTGAATTGAGTAATCCTTGAATTCCACATTCAAAGAACACCATGCTGCAGTATTTCTCTTAACCGTGTCCATAGTGCAGCCTCCTGCCTTGTCGTGAAAAATGCGCTGACTGCACTCATATCAGATTTCTGCCAATAGTGCTTTTGACATGTTTGCCCAAATTAGTCTGTCTTTTTGGCAACAGAGGACCCCTCAATAACAGGAAAACATTTGAGCAAAGAGATCCGTTGAAAGCCCAAACTACAATAAAAATAGAAAGGAAACTTCTCCAACATTTAGTGGAATAGGGACATAAAATAAATAAATGTAACAAATCCTCACTGTTCTTCATACAAAGAGGGCCCATTGGGGGCAGCAAGCACTTGTTGGGGAGTTTTCTTTGCATGATCAAGGAACAATTTTGGAGACCGAAAGCCATAATCCAAATTAATATGTTGACTCTCCTTGGGCTGCTGGTCTTCCAAAGAGCTTTGAATGTAGCTTTGTTCAGCATGGGGCAAGGTCAGTTGAAATGGATTTTACTGAGGATCTGCCCGATGGGTCTAAAGACCATACTCTACTGTCTTCCAAATCTGCTACTCTTTTAGAAGAAGGTGAAAATTTTGGCCTCATTCAAACAAATTAATAACTTCCTTTTAACTTTAGGAGCATTGCCTCTTCATATTTACAAAATAGGATTGTATCATCAGCATGTTGGAAAATAGAATGTGGATCTTATCCTTTCCAACCGTGAAGCTTTCAAAATGTCCATTACTGTGTAACTTCTTGATAATGGCTCCTAGAACTTTGCTGAATAGCAGAAATAAAAAAGGAGAGAGAGGGTCTCCTTGTCAAATGCCTCTAGAAGCCATAATTCTGCCTCTTGGTTTTCCGTTAATGTAAATAGAGAATCGAGGGTTTTTCAGGCAGCCCATCATCCACGTTGTCCATTTATAGCTGAATTTCTTGCAAGGTGCACAAAAAGGCCCGCCTAGGCTCTAGAGGGCCATTGCGCCTTAGTTCGTCTTGGGCATTTTAAAACACTGAAGAGGACAAAAATGAAAATTCTGAGCTATCTTGAAACCAACCAAATAACATCTGATCCATTAAAAATCATTAACTACACGAGTCAACAAGCTGCTATCATGACTTCTTAAACACAACTAAAGAACCAATCTTGAGGATAATATATCTAAGCTTCAGTTGAAAGGGCAGGCCATTTGACGTAACATCTTTTGATGACAAAACTTCCATAAATAGTTTACCAAAGTCTCGCTCAAGGATGATTAGCGGAATGGCTTCTTCTTGTTAAAAACTCCTAAAGCGCACTCTCTTCTAACTCTTCATTGCTTACACTAATAGTAAGCACACCTATCATGGTTTATTATAATTCTCATTCCAAAATTATCTTCCTTCCAACTAGTAAGCTTCTCCAAACACTTCCCAACCTTATTGTTGAAGCTGAAAATTGCCATCATATTAGTCAACTTAAGATCATCCTTTTGGATACTTGAATTAACATAGATCCATATTATGTGACTAAAAGAATCTTTTGAGGGCCAATCTCTTTGATGGGTCTTTCAAAACTCTCGTGCTCCACGGCACGATTTTCATTCTCAAATAATCTTCACTCTAGCAAAGGATGCTGCTGGATATTAGGCCAAAATCAGATTCTAGTTGGCTACCAATGACTTCAGATGGGCTGGAACTTCACAAAGGTGAACTTGAGATAAAACAATCCAAAGCTTGTTGTTTAACTTCTGGTCTTCTTCACACTGAAACAAAGCATTCAAATCAACTTCTATTGGTTCCTTTTATCTATGCTTTTCTATTTCATCCGATTTCTCAAATTGGTCAAATTCCTCACTGCTTACACTGAATAAGGAGACAATCAGCTTTTCTTTTCTTCTGAGATGGATATATTGGAGTGTGAACTGGAATTCCTCTTTGAAGATTCACCTTTGCATTGGGGAATGATAAAGCATAGTACTTAAATTGTGGAGGGAGAGATTTTTGGGCTTCCGATCTGTTGCTTTTGCTGGGAGCTTGAATCTGTGAACATATTTCTTCTGAAACATTTGGATTAGAATCTGAAAACATCTTTGTCTTGGAAGAAGTCTTCTTGGCTATTTCCATCCTCCGATCTACCTCTTATTCTGGTCGAAGAAGAGATGGCTGAAGAAGAATTTGAATGAGAAGAAAAAGAATTACTTGTTCCCTTAATGGCATAGTCTTTGTTGGTCTCTAATAATGCAACTGAAGGAAGGGCTAATTGATCCGGGGGCAATGACTCGCTGCTGGACGAGATTTGGTTGGATGGGCCCATTGATAGACCTCCGATTGTCTACCAATACACTAGAAGGAAGAAGTTGAATAAATAAAGTAGAGGTAGTGTGGCGTGTGTTTAGTACGTGATTAATTAGAAGTCAGTTAGATGTGCACGTGAATAGCACGTGGAGGTTAGGATCTTGGGGGGGGGGGGGGGGGGGGGAAGTTGTGACGAAAATCAGGAATATATTGAAGGAGGTAGGGGCGGGAGAATGAGTGAGGTTTTATGTGGTGTGAGGTGTTTCTCTGTTGGGCAACAGAAGAGTGTTTCTTTTTACATTGTATCCTAGAACAATCTCGTTCTATAATTAATAAACAAGTAGCAAGTTCGTGCGATTGGGGTTCCATCACCCACTTGCCTTTTGGGCTTTCATCTTGAGAGAAACACCTGAAATTAACTTTAAATCCTGAATATCCACCTTATTAAGGCTTGAGTTCTCATTGGGCGAGATAAAGGACTTGGTTGTACTTTTCTCTGTAATCATTGAAGGGGACTTTTTAACTTCCTCAGCGGAATTCACAACTGGTTTGCTGCTCTTCTTCTTCGGTTTTTTGCGGGCAATCTGATTTTTCAGACAAGAAGAAGATGAAGACTCACCCGACCCTCCATGATCATCTTTTTTTAAGGCCTCGAAGGGAAACCAGGTTTTGAAAGTGAAGTAGAAGGAAGCCCCATTTTGAGTTCAAAATATTCAAATCTTTCTCTTCATCTAAAAGAACTAGATTTAGTCTCACTAAATCAATTGGATTAGTAAAGTTTTTTAAGAACAATGACTTTTGGGTCTTCTAGTGCTTCGAAGTCCCTAAAATTGAGCAAAATGTTGTTCTGATTTTCATCTCTTAACTCGATCATTGCTGGCAAGAAAACACACAGGTTCTGAATAACCTTGATTTTACCCTCCGAACAGTCAATCATATTCAAAGTATCTAAAGAAATACTTTCAACCAAAATATGCTCCAATAACATTAAATACATCAATACTCCAATAATCCAACGGTAAGTTATTTATAGAAATCCAGCCTCCATAACCCTTAACTACTTCCAATTGACTGTGCTTGAAGCTATTCCATTTTTCAAGAAGGAGATGAAATGGCCCAAACCTCTGCCGTTTACCTGGATTCTCAACCAACTCTTCAAAGTTTCATAGAGGAGCTCTGATTAAAGCTTTATCCACATATAATGTATTGATGCAAGTTTTTGAATGAGAATGTTCCTCTAAAATTTTGTGATTTTCTTCTAAGCTTTAAACGCTAAGAAATGGGTGATGACTCACAGGCTGCTGAAATATTCCTTGAAGACTCCACTTTTCTTATGAACCCATTAAGATTGAAGACCTTGATTTTTAATAGTACTCACAAGCATTGTTGTCCTCTTTTTGATAATCCACCAAATTGGTTGTGATGACTTTTGTCTGCACAGCCAGCAATTCTGTCATCTGAGAACTCTTCGTCTTTAGAACTTCTTTGCTTGCTGATCTGAGGGAAAAACATTTTAACATTTCAACGAATAAAATCCATCCTGGCAATTTTAGACCCAATGGAATATGTATGAAAGAAGGGCCTCTGGTCATCCCATCACCGATCCTAAAGTGCCTAAAAATTTAGAATCTTGACAACCTCACCTCATCCTTAGCCCTCCGTATAAAGAAAGAAGAGCTCTGTCCTTGAAGGAGCTCCGAAATTCGATCCACGAACCAGTCTAAGTGAGACTTGACTAATGGCAAGGATGTTTTGTATTCCACATCTTCCACGAAGAACTTACCCTCTTCAAACCAAATGCAGAAATAGGAATCATTTATCTTGCAACTATGAACATCCATGTTTTAGTTTTTTGAGCTGAAAAGTAACTTGAGAGGGCTGTGGGCCTATCTGGATGAACAAAAGGAGGCTGCTGGAAGCTACCGATCGGAGGAGAAGGAAGACTAAGGGGGGAGAGAGATGTGAAAGAGGATGAGAGAGGAGAGAGGACCTCTTAGTTAGTTATTGAGATTGTATCTCCTTTTTTTACAACTAGGCCAACCCATGATGGTTATTTTCTTGCTTCTTAATCATTTTCAAATGCATTTAAAGCACATTTCCAAGATAGTTCATAGTTATTTCTTCTTTAGTAAATTATTCCTTTGTCATAGAAGATGGATAATTTATTCATGGAGTCACAACAAATCCATATGTTGCTGAGAGCACACAATTAACATTATAAAATTTAATTTCATGAAAACACAGTCTACTTGTATTTATGATATATATCTGACAACAAACAAGTTTAAACTTGAGTCTCGTGACATATAATCCTAAGAAAAAGTTGCAGTGATTGTTTCATAACACAAGACTTTGGCCTTCCAATTGTTTTGCTATTTCAATTATCTCATCTAAATCTTCTAATTTCCATAAGGCACTGGTAATTTATTATTAGTACAAGAGGTTGGGGATAGACCCCTTTGTTTACTTTCACATGATGAATCATTTGGATAAAGGTCCCTTATCCATAATAGGAGAATTTTATATTAGCCTAGGGTGAAGTGTATCTTTGGGGTCTTAGAGTCCTTTTGAATGATCTTCTTGTAGCAATTTTCTCAATGGTGAATCCCTCTCCCTATTTATACTCTATCTTGTTGTGGAAGACGTTAAAATTTCAAAAACGTTAAGTTCTCATGTGATAGGCCTTTTATAGAAGAGTTACGACTTCAGATTGATTTGCAAGGAAGTTACCCTCCATGATATGGTCATAATGTTGTATTCTATGTAAAATTGCGTTAGAGGATGTGGACCACCTTCTATGGAGTTGGAATTTTGCCTTTTTGATTAAGAGTTGTTTTTTTAGCTATCTAGTTTTCATTTAGTGCAATCTTGGAGCTGTAGCTTTATGATTGAGGAGTTTTTTTTTTCTTCATCTAGCCTTTCAAGGAAAGGGGTGTTTTTTGTTGCATGTTAGGGTGTGTGATTTTGTGGGATTTTGGGGTGAGGGGAATGATATAATCTTTAGAATGTGTGGTAGGACTTCAATTGTTGTTTGGTCTTTCATTAGGTTACATGATTTTTCTAGTCTTTAGAGGTTTAGGCTCTTTGTATTTTATTAACATTCTAGAGGGGAATCTTTTCTTTGATCATTACTCTCTCCTCTCTCTGTTATCTTCTCCTTTGATTTTCTTCACATTTCCTGTTATCTCTTCGGCATCTCCAATCCTCGGCTTCACTTTTCAGTCATCTTTGGGGTTTCTTCAGCTTAGTTCTTGCTCATGGAAGTAGCAAGTTGCAAAATACTTCATACGCACTTCTGCGTTTGGCTAGAAAACGACCAGTTTCATGTGGAGGGTGTGGATGCTCAACGATGCCTAGTCGTGTCAGAAGCCCATGTGAATTGTTTCCTAGCAACGATAGCTAAGTTAGTCAGAGGCTCAAAGGATCGTTTCTTTCTGAAGCTTGGGGAGTTTGACCGTGGGAGAACGAAGCTTTCAAAGTTCAGATCTGACATTGACTGGGTTTTATGTTGTGATTTCTGGCCGGCTTCAGGTGGGCATTGAACCATTAGGGTTTCTTTTGGGGAAGACAAAAAGGGGTGGTTGTCCTTCCTTCAGCTGTTGGAACGGTTCTTATCAAATTTGGAGTATAAGAAATGGTTCTCGAGCCATCGCCTTGCATCTCAACTCCCTTCACAGGTCAAAGATTGTCTTATGTTGATAGCGTTAAGGCTAGGGATGTAGAGATCTTATGTTTTGGACCACTTTTACTAGCTCTGTGTCATTTCACTCCTCGATTTTTCGGATACGGTGAGGATGCTAAGGGGGTGTCAACCTAATTGAGTAGTCTGGGTGTGTCTACTGATCCCTAATTCTTTAATTGCTCATTGTATAACCCTCTTGTACTTTGAGCTCTGTCTCATTTTTATACTAAATGAAATTCATTTCCTTTAAAAAAAAAAGAAAGTAAACTCTGACCCAAGGGCAAAATCGAAAAAGAAAGAACGTTACAAAAATTTCCTGCATTAACTCAAGCCCTTCCCGAAGTTTTTCATCCGAAAGAAAAAATCTAAGAAGTCTTCTGCTAAACACTCATTCCTCAGTCCAATCCAGCAAATCCAAGTTGTTCTTAGAAGCCAATCCAGATTTGTTGGAAGTTAGTTGTATGCAAATTCTAGCTCCATCCCGTCCTACTAATTCGATTGATCATGATTCTCACCCTATGCAGTTTAAGTACGCAGAATTCTATTTGCCCAACTTGAAGGCAAAATTTTTAAGAGGCTCTCTGACCAAAATCCCTTTCAATCCCTCTAGAAAAAATGGTGAGTCTTCCTTCGACTCTCCTTTCAGCATTAGGGGTGAGGAGTTGGAGTTTTCTACTAAGTCATCCAAGCTTGAGAGGTAGAAACATTTTGACCCTTTAGAAACAGACCTTAATGCACTGTTTCATTGCGAGGAAGACCTGAAATATGAAAATTTGCTTTCTGCTTCTTGCTTTTGTTCTCAATCCTGCGAAATACCAGATCATCTAAAGTCAATAGTTGTCGATAGTGAATTTATTCTATTTTGATTCTCAGAAGCTTGGTCCAACTTTTGGCTTTCCTTAATTTCTCTTCATGTGGGTGGCAAGTAAAACGTAACTGATTGAGGTAGTTGACTTGAGATTAGGTTTGATTTTAATCTTCGTTTCTTTAGTTTGCCAAAGGGGAGTATCTTCTGGGGTCTATTTTTTGGTTTAGTGGCTGATGGTTTTGAAAACTTCTCCGAGCTTCCTCTGGGTTCAATTTATATTTCGCAAGACAGATTTGAGGCAACTGTTTGCATCTTTTCGGCAACTATCTTTCTCCATTCATTTTGAAGTTTTGAGCATGCAAGTTTTTATTTAAAAGGGATTGCTTTTGAGAAAACTTACTTTTGCTTTCTATTTAGCTTTCTTCATTTGCTTTATCTTTGAGTTGTTTGTTTTAGTTTTGTTTATTTTCCGTTAGAACTTGTTTTTAAGTTGCTGTCTTTTTGTTTGCCTAAGCTAGCTTCAGTTTTAGTCTGACTGTATTCTTCTAGTGCTCTTGTTCTTAGTATAATACTTCTGTACTTTGAGGTTAAGTCTCATTTATTATCATTAATAAAGAGGCTTGTCTCTGATTTCAAAAAAAAAAAAAAAAAAAAAACATCCTAGGGGGTGGGTCAAATACCTCAAATTACCCAGCTATCTTGTAAGTTTTCATTATTTACATTTCAATATAGATTGATTGTGTTTTAGTTCCTATCATAATTATTCTCTTAGTTTCATTTTTTGCTTGATTTGAGTCCTCTTTTATTGATTGGCTCCTTTTGTTTTGACTTAATTTTTTTTAATGTCCTTGCATTCTTTCATTTGTTTTCAATAAAAGCTCAGTTTTTAATTAAGAAAAATATTCTTCTATTACTATTAGTTATATGTGCCTGAGGTACACTTGCAAATTTGAAAAAAGCTACGAGTTATTAGTTACCAAGTTGGGCCGAAACCTTTTTTAAGAATGGCTTCTTACATTGGCTATTATATTAAAGAAGAAACATGAGAATAATTATATCAACAACCATTTTTTTCTTTCTTCAACTAACAATGGCTCTGTGATTTTAGTTCACCATGGAATTGGCTAGCACTGACTCTGGAAATGCATTAAGGTCCTACTCATTGAATATGTCTACAGACTTCATTCCAATGTCTGTATTTTCTGAGTCATCACAAGGTTAGTTTAGGTCACTCTGGCCTGCTTGTTAGAAAATGACCAATGAATATGATGTTTCAAATGTTTGCTTGTAATAAGCTGGATGAACTATTACCTGATTGTGATCTGAGATTGAATTTGTAGTATGTGTTCAACTGATATTGACATCTTCGTCAATCTTGGATGTGAATAACTATTTTTATTGACTTAAAAAATCAGACCATATGCAAATTAATAATTAATTTCACAATTTGTATGATTCAATATTAGTTAATCATTTTGTACTAGTAAAATCATGAGTTTGATCATCAATAGCCCTCAGTTTGTTTCTATTATCTCTTTCGAATTGAGGTTTGGGCATATCTCTTGATGCACTTCTTGCTGGATATTTATAGTGTGTTTATTGTTTAAAAAGGAAAAAGAAAAACAAAACTTTACGTGGGAGTTCGTATGAGCTACTGTGTTTAGTTGAATCCACACCAACGAGTTCATTAGGCTTGTGCTGTAATTTATATATATTTAGTTGAGATGAAGCTTTTGTGCTTAACATTGCCGTCCAAGTTCCATCCCTTTCTGTGTTGTTTCCTTCAATAATCCTCTTTAATTCCTTTTCTGTCCAACATCTGATGTGTCGAGACTCAGTCAGGTACCTTACAATATTTGGAGTCTTTTATAAACTAATTGTATCTGAAAGCTATTAAAGTGGACTACTGATCTCATACTGATGAATAGTATTACTATATCTGATGAAAACTAAAACATCTTTCACCAGCTAGGGATGTAATTTATCTCAATGCACATAGCGCCAGTTACTGATCAAATTCAGCAGAAACATTGCGTATTTGCTTATTAACAAGAGTTCTTAATCATTTGTTGTCATGACACATTTATAAGTTCTTTCCAGCATATGGTGCTGAGGTTTTATAATGTTAGTAGAGGAAATTTTCATTAAGCGAGTTATAGTATGGAGAACTCGTATTCAATTATCAGCATGATCAATTTTGAAAAATTCTACTTTGTACATGGCAAACAATGAAAGCAATAAGTTGTGTAGTAGGGTCAACTGCTAGAAGTCTGTAGCACGGCAGCTATAGCTTTCTATTTTTCATCTTGAATTTTTTAATTATTTACTGGATAAACATATATAACTGATAAACTCTGTGGGTGTACTGAAAATGCTTCAAATTCTTCTTTCATTTTAGGGAAGTTTACCATTGAAGGGAAAATACTGAACAAATTTGACATGAAGCCACATGATCAGAATCTTGAGAGGTATGGGAAACTCTGTCGTGAAAGAACTCACAAGTCTATGACCAAAAGCAGACAGATTCAGGTTTCTTTTCGAATTTGTGTTATGCAGCGTACTTAGGTGTTTGGTCTTTTTCTTTATTGCTCTCACGTTCCATTGGTTAACATTTCCAAATATTCTATATAGGTGATTGATCATGCCACAGGAGGACATATGAGGCCTATGCCAGGGATGGACGTGTTGTCATTTGGAGCTGCAGTAATTATACTACCTTCATTTCTTCTTTGATATCATTATCAAGTTAAATTTTGATTTCGCCTGTGCTGTATTACATTCCCTCGTAGCCAGTCAGCTTCCAAGAATTTTTTTAAAATACTAATTTTGGTACAGGAGAAGAAGAAAGTGGTGAGCAAAGGATCGGAGACAAAACGGTTGAGAAAGGAGCGTGGAGAATTGGAGAAGATTATTTTTAAGCTTTTTGAAAGACAGCCATATTGGACGTCAAAACAATTGATTCAAGAGACTGACCAACCTGAAGTAAGATTTATCTTAGGCTTTTTTTTCGTTTTTTTATATTATTTTATTATTTTACTTTTATGAAACAAAGAAAGTGCATTGACTTATCCAAAAGGAATACAGTCTATAGAATCGAAGGGTTGGAAGGGTGAAAAATTCCTTACCTCAGATTAAACTTTGGGCTATAAGCTATAATTACAAAAGTTTTCTTGTTTTCAGATCTCATAAGGTAGAGTTTGATTGTACACCTATCGGATACTAAGCTTGCATGTATAGTTTATAATGTAGATTTCGTTTATATAGAATAGAAACCATATCGATAAATGAAACTGGTTTTATGCCGAATCTTTTAACTTGTGACTAGAGTTTTACATTGTTTGTTACTGACCTGAACATAATTCTGGAATATAAAAATAAATCACTCCCTATTTTTCATTTAGAAAAAGGTCACTCATCTCTCAAACATATGCAATATGCATCTTTTGAAAAAATGCAAATGGACTGCTCACCTGAAACACTGCAGTTGTAATTGATATCTTGAATATGCTTCTTGTTAGGCTACCACGAGTGATTAAAGCCTGAAACATCCACTCTTTCTTTTTCTTTTTTTTATTGAAGCAATATATGAAGGAAATACTTAAAGACCTTTGTGTCTACAACAACAAGGGTGTTCACCAAGGAACGTATGAGCTGAAGCCAGAATACAGGGAATCAAGTGAGGAAACGAAACCGCGATAG

mRNA sequence

ATGGACGTCGACGGCAAATCCATCGACCGTTCCACTTCCAGAAAACACCAAACCAATAAAAACAACATCGTTGTTGGAACCGACTTCTTAGAGACTAACAAGGCGGACAGAGCAATGTGGCTCTTGAAATGTCCCCAAGTTGTTACTCGCGCCCTTTCTAATTCACCTGATGCCCCTTCCCGTCCTGTCGCTAAGGTCATCGTTTCTGTTGACCCACTTCAATCCAATGACGATGATGATTCTTCCTCTACTGAGTTCACCATGGAATTGGCTAGCACTGACTCTGGAAATGCATTAAGGTCCTACTCATTGAATATGTCTACAGACTTCATTCCAATGTCTGTATTTTCTGAGTCATCACAAGGGAAGTTTACCATTGAAGGGAAAATACTGAACAAATTTGACATGAAGCCACATGATCAGAATCTTGAGAGGTATGGGAAACTCTGTCGTGAAAGAACTCACAAGTCTATGACCAAAAGCAGACAGATTCAGGTGATTGATCATGCCACAGGAGGACATATGAGGCCTATGCCAGGGATGGACGTGTTGTCATTTGGAGCTGCAGAGAAGAAGAAAGTGGTGAGCAAAGGATCGGAGACAAAACGGTTGAGAAAGGAGCGTGGAGAATTGGAGAAGATTATTTTTAAGCTTTTTGAAAGACAGCCATATTGGACGTCAAAACAATTGATTCAAGAGACTGACCAACCTGAACAATATATGAAGGAAATACTTAAAGACCTTTGTGTCTACAACAACAAGGGTGTTCACCAAGGAACGTATGAGCTGAAGCCAGAATACAGGGAATCAAGTGAGGAAACGAAACCGCGATAG

Coding sequence (CDS)

ATGGACGTCGACGGCAAATCCATCGACCGTTCCACTTCCAGAAAACACCAAACCAATAAAAACAACATCGTTGTTGGAACCGACTTCTTAGAGACTAACAAGGCGGACAGAGCAATGTGGCTCTTGAAATGTCCCCAAGTTGTTACTCGCGCCCTTTCTAATTCACCTGATGCCCCTTCCCGTCCTGTCGCTAAGGTCATCGTTTCTGTTGACCCACTTCAATCCAATGACGATGATGATTCTTCCTCTACTGAGTTCACCATGGAATTGGCTAGCACTGACTCTGGAAATGCATTAAGGTCCTACTCATTGAATATGTCTACAGACTTCATTCCAATGTCTGTATTTTCTGAGTCATCACAAGGGAAGTTTACCATTGAAGGGAAAATACTGAACAAATTTGACATGAAGCCACATGATCAGAATCTTGAGAGGTATGGGAAACTCTGTCGTGAAAGAACTCACAAGTCTATGACCAAAAGCAGACAGATTCAGGTGATTGATCATGCCACAGGAGGACATATGAGGCCTATGCCAGGGATGGACGTGTTGTCATTTGGAGCTGCAGAGAAGAAGAAAGTGGTGAGCAAAGGATCGGAGACAAAACGGTTGAGAAAGGAGCGTGGAGAATTGGAGAAGATTATTTTTAAGCTTTTTGAAAGACAGCCATATTGGACGTCAAAACAATTGATTCAAGAGACTGACCAACCTGAACAATATATGAAGGAAATACTTAAAGACCTTTGTGTCTACAACAACAAGGGTGTTCACCAAGGAACGTATGAGCTGAAGCCAGAATACAGGGAATCAAGTGAGGAAACGAAACCGCGATAG

Protein sequence

MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPSRPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESSQGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR*

Homology

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BLAST of Chy9G164180 vs. ExPASy Swiss-Prot
Match: Q01750 (General transcription factor IIF subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2f2 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-15
Identity = 70/252 (27.78%), Postives = 120/252 (47.62%), Query Frame = 0


Query: 34  KADRAMWLLKCPQVVTRALSNSPDAPSRPVAKVIVSVDPLQSNDDDDSSSTEFTM--ELA 93
           K +  +WL+K P+ +++  + +P             V  L+   +   +   FT+  +LA
Sbjct: 13  KQNTGVWLVKVPKYLSQQWAKAPGRG---------EVGKLRIAKNQGRTEVSFTLNEDLA 72

Query: 94  ST-DSGNALRSYSLNMSTDFI-------PMSVFSESSQGKFTIEGKILNKFDMKPHDQNL 153
           +  D G    S S      F+        ++VF+ESS  K ++EG ++ + + +P     
Sbjct: 73  NIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPAAS-- 132

Query: 154 ERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGMDVLSFGAAEKKKVVSKGSETKR 213
           E Y KL R +  +S    R  Q  D     + +P+       +    ++K   K  + KR
Sbjct: 133 ENYMKLKRLQIEESSKPVRLSQQADKVVTTNYKPVANH---QYNIEYERK---KKEDGKR 192

Query: 214 LRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTYEL 273
            R ++  +  ++F  FE+  Y+  K L+  T QP  Y+KEILK++ + N KG+H+ T+EL
Sbjct: 193 ARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWEL 247

Query: 274 KPEYRESSEETK 276
           KPEYR    E K
Sbjct: 253 KPEYRHYQTEEK 247

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BLAST of Chy9G164180 vs. ExPASy Swiss-Prot
Match: Q2T9L9 (General transcription factor IIF subunit 2 OS=Bos taurus OX=9913 GN=GTF2F2 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.7e-15
Identity = 69/252 (27.38%), Postives = 121/252 (48.02%), Query Frame = 0


Query: 34  KADRAMWLLKCPQVVTRALSNSPDAPSRPVAKVIVSVDPLQSNDDDDSSSTEFTM--ELA 93
           K +  +WL+K P+ +++  + +P             V  L+   +   +   FT+  +LA
Sbjct: 13  KQNTGVWLVKVPKYLSQQWAKAPGRG---------EVGKLRIAKNQGRTEVSFTLNEDLA 72

Query: 94  ST-DSGNALRSYSLNMSTDFI-------PMSVFSESSQGKFTIEGKILNKFDMKPHDQNL 153
           +  D G    S S      F+        ++VF+ESS  K ++EG ++ + + +P     
Sbjct: 73  NIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPAAN-- 132

Query: 154 ERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGMDVLSFGAAEKKKVVSKGSETKR 213
           E Y +L R +  +S    R  Q +D     + +P+       +    ++K   K  + KR
Sbjct: 133 ENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANH---QYNIEYERK---KKEDGKR 192

Query: 214 LRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTYEL 273
            R ++  +  ++F  FE+  Y+  K L+  T QP  Y+K+ILK++ V N KG+H+ T+EL
Sbjct: 193 ARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVSYLKDILKEIGVQNVKGIHKNTWEL 247

Query: 274 KPEYRESSEETK 276
           KPEYR    E K
Sbjct: 253 KPEYRHYQVEEK 247

[Close]

BLAST of Chy9G164180 vs. ExPASy Swiss-Prot
Match: P41900 (General transcription factor IIF subunit 2 OS=Drosophila melanogaster OX=7227 GN=TfIIFbeta PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 6.7e-15
Identity = 72/259 (27.80%), Postives = 125/259 (48.26%), Query Frame = 0


Query: 30  LETNKADRAMWLLKCPQVVTRALSNSP----------DAPSRPVAKVIVSVDP-LQSNDD 89
           L+ + A R +WL+K P+ + +    +P          +      A+V +S+ P + + D 
Sbjct: 16  LDLSNAGRGVWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLALDP 75

Query: 90  DDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFS--ESSQGKFTIEGKILNKFDM 149
           ++   TE  ++++   +   L  +S    +D    S  S  +    K  +EG+I+ K + 
Sbjct: 76  EEKIPTEHILDVSQV-TKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQKLEC 135

Query: 150 KPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGMDVLSFGAAEKKKVVS 209
           +P   N   Y KL  E   K+    R++Q ID     + +P+      +    E+KK   
Sbjct: 136 RPIADNC--YMKLKLESIRKASEPQRRVQPIDKIV-QNFKPVKD-HAHNIEYRERKK--- 195

Query: 210 KGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGV 269
             +E K+ R ++  +  ++F  FE+  Y+  K L++ T+QP  Y+KEILKD+C YN K  
Sbjct: 196 --AEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNP 255

Query: 270 HQGTYELKPEYRESSEETK 276
           H+  +ELK EYR    E K
Sbjct: 256 HKNMWELKKEYRHYKTEEK 264

[Close]

BLAST of Chy9G164180 vs. ExPASy Swiss-Prot
Match: Q8R0A0 (General transcription factor IIF subunit 2 OS=Mus musculus OX=10090 GN=Gtf2f2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.0e-14
Identity = 69/252 (27.38%), Postives = 120/252 (47.62%), Query Frame = 0


Query: 34  KADRAMWLLKCPQVVTRALSNSPDAPSRPVAKVIVSVDPLQSNDDDDSSSTEFTM--ELA 93
           K +  +WL+K P+ +++  + +              V  L+   +   +   FT+  +LA
Sbjct: 13  KQNTGVWLVKVPKYLSQQWAKASGRG---------EVGKLRIAKNQGRTEVSFTLNEDLA 72

Query: 94  ST-DSGNALRSYSLNMSTDFI-------PMSVFSESSQGKFTIEGKILNKFDMKPHDQNL 153
           +  D G    S S      F+        ++VF+ESS  K ++EG ++ + + +P     
Sbjct: 73  NIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPAAS-- 132

Query: 154 ERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGMDVLSFGAAEKKKVVSKGSETKR 213
           E Y KL R +  +S    R  Q +D     + +P+       +    ++K   K  + KR
Sbjct: 133 ENYMKLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANH---QYNIEYERK---KKEDGKR 192

Query: 214 LRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTYEL 273
            R ++  +  ++F  FE+  Y+  K L+  T QP  Y+KEILK++ + N KG+H+ T+EL
Sbjct: 193 ARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVGYLKEILKEIGIQNVKGIHKNTWEL 247

Query: 274 KPEYRESSEETK 276
           KPEYR    E K
Sbjct: 253 KPEYRHYQTEEK 247

[Close]

BLAST of Chy9G164180 vs. ExPASy Swiss-Prot
Match: P13984 (General transcription factor IIF subunit 2 OS=Homo sapiens OX=9606 GN=GTF2F2 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 7.4e-14
Identity = 69/252 (27.38%), Postives = 119/252 (47.22%), Query Frame = 0


Query: 34  KADRAMWLLKCPQVVTRALSNSPDAPSRPVAKVIVSVDPLQSNDDDDSSSTEFTM--ELA 93
           K +  +WL+K P+ +++  + +              V  L+       +   FT+  +LA
Sbjct: 13  KQNTGVWLVKVPKYLSQQWAKASGRG---------EVGKLRIAKTQGRTEVSFTLNEDLA 72

Query: 94  ST-DSGNALRSYSLNMSTDFI-------PMSVFSESSQGKFTIEGKILNKFDMKPHDQNL 153
           +  D G    S S      F+        ++VF+ESS  K ++EG ++ + + +P     
Sbjct: 73  NIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPAAS-- 132

Query: 154 ERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGMDVLSFGAAEKKKVVSKGSETKR 213
           E Y +L R +  +S    R  Q +D     + +P+       +    ++K   K  + KR
Sbjct: 133 ENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANH---QYNIEYERK---KKEDGKR 192

Query: 214 LRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTYEL 273
            R ++  +  ++F  FE+  Y+  K L+  T QP  Y+KEILK++ V N KG+H+ T+EL
Sbjct: 193 ARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWEL 247

Query: 274 KPEYRESSEETK 276
           KPEYR    E K
Sbjct: 253 KPEYRHYQGEEK 247

[Close]

BLAST of Chy9G164180 vs. ExPASy TrEMBL
Match: A0A1S3CPB8 (Transcription initiation factor IIF subunit beta OS=Cucumis melo OX=3656 GN=LOC103503304 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.4e-150
Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MDVDGKSIDRSTSRKHQTN NNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS
Sbjct: 1   MDVDGKSIDRSTSRKHQTNNNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSY+LNMSTDFIPMSVFSESS
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYTLNMSTDFIPMSVFSESS 120

Query: 121 QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPG 180
           QGKFT+EGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGHMRPMPG
Sbjct: 121 QGKFTVEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRPMPG 180

Query: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240
           MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY
Sbjct: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240

Query: 241 MKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 278
           MKEILKDLCVYNNKGVHQGTYELKPEY+ESSEETKPR
Sbjct: 241 MKEILKDLCVYNNKGVHQGTYELKPEYKESSEETKPR 277

[Close]

BLAST of Chy9G164180 vs. ExPASy TrEMBL
Match: A0A1S3CPE2 (Transcription initiation factor IIF subunit beta OS=Cucumis melo OX=3656 GN=LOC103503304 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.9e-148
Identity = 272/283 (96.11%), Postives = 275/283 (97.17%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MDVDGKSIDRSTSRKHQTN NNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS
Sbjct: 1   MDVDGKSIDRSTSRKHQTNNNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSY+LNMSTDFIPMSVFSESS
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYTLNMSTDFIPMSVFSESS 120

Query: 121 Q------GKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGH 180
           Q      GKFT+EGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGH
Sbjct: 121 QDSSFVLGKFTVEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGH 180

Query: 181 MRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQET 240
           MRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQET
Sbjct: 181 MRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQET 240

Query: 241 DQPEQYMKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 278
           DQPEQYMKEILKDLCVYNNKGVHQGTYELKPEY+ESSEETKPR
Sbjct: 241 DQPEQYMKEILKDLCVYNNKGVHQGTYELKPEYKESSEETKPR 283

[Close]

BLAST of Chy9G164180 vs. ExPASy TrEMBL
Match: A0A6J1BZ89 (Transcription initiation factor IIF subunit beta OS=Momordica charantia OX=3673 GN=LOC111006053 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 253/278 (91.01%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIV-VGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAP 60
           MDVD K IDR +SRK QTN N++   GTDFLETNKADRAMWLLKCPQ VTRALSNSPD P
Sbjct: 1   MDVDDKPIDRCSSRKLQTNNNSVSGTGTDFLETNKADRAMWLLKCPQAVTRALSNSPDGP 60

Query: 61  SRPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSES 120
           SRPVAKVIVSVDPLQSNDDDDSSSTEFTMELA TDSGN+LRSYSLNMSTDFIPMSVFSES
Sbjct: 61  SRPVAKVIVSVDPLQSNDDDDSSSTEFTMELAGTDSGNSLRSYSLNMSTDFIPMSVFSES 120

Query: 121 SQGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMP 180
             GKFT+EGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGHMRPMP
Sbjct: 121 PPGKFTVEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRPMP 180

Query: 181 GMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQ 240
           GMDV SFGAAEKKKVVSKGSETKRLRKERGELEKIIF+LFERQPYWTSKQLIQETDQPEQ
Sbjct: 181 GMDVTSFGAAEKKKVVSKGSETKRLRKERGELEKIIFRLFERQPYWTSKQLIQETDQPEQ 240

Query: 241 YMKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 278
           YMKEILKDLCVYNNKGVHQGTYELKPEY+ES +ETK R
Sbjct: 241 YMKEILKDLCVYNNKGVHQGTYELKPEYKESGDETKSR 278

[Close]

BLAST of Chy9G164180 vs. ExPASy TrEMBL
Match: A0A6J1JIQ3 (Transcription initiation factor IIF subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111487292 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 1.0e-135
Identity = 250/277 (90.25%), Postives = 261/277 (94.22%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MD D K IDR +SRK  +N ++ V GTDFLETNKADRAMWLLKCPQVVTRALSNSPD PS
Sbjct: 1   MDGDDKPIDRGSSRKLHSN-SSTVAGTDFLETNKADRAMWLLKCPQVVTRALSNSPDDPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELA TDSG ALR+YSLNMSTDFIPMSVFSES+
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELADTDSGKALRAYSLNMSTDFIPMSVFSESA 120

Query: 121 QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPG 180
           QGKFT+EGKILNKFDMKPHDQNL+ YGKLCRERTHKSMTKSRQIQVIDH TGGHMRPMPG
Sbjct: 121 QGKFTVEGKILNKFDMKPHDQNLDSYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRPMPG 180

Query: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240
           MDVLSFGAAEKKKVVSKGSE KRLRKERGELEKIIF+LFERQPYWTSKQLIQETDQPEQY
Sbjct: 181 MDVLSFGAAEKKKVVSKGSENKRLRKERGELEKIIFRLFERQPYWTSKQLIQETDQPEQY 240

Query: 241 MKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 278
           MKEILKDLCVYNNKGVHQGTYELKPEY+E+ EETKPR
Sbjct: 241 MKEILKDLCVYNNKGVHQGTYELKPEYKETCEETKPR 276

[Close]

BLAST of Chy9G164180 vs. ExPASy TrEMBL
Match: A0A6J1HK34 (Transcription initiation factor IIF subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111464830 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.0e-135
Identity = 249/277 (89.89%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MD D K IDR +SRK  +N ++   GTDFLETNKADRAMWLLKCPQVVTRALSNSPD PS
Sbjct: 1   MDGDDKPIDRGSSRKLHSN-SSTAAGTDFLETNKADRAMWLLKCPQVVTRALSNSPDDPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELA TDSG ALR+YSLNMSTDFIPMSVFSES+
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELADTDSGKALRAYSLNMSTDFIPMSVFSESA 120

Query: 121 QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPG 180
           QGKFT+EGKILNKFDMKPHDQNL+ YGKLCRERTHKSMTKSRQIQVIDH TGGHMRPMPG
Sbjct: 121 QGKFTVEGKILNKFDMKPHDQNLDSYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRPMPG 180

Query: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240
           MDVLSFGAAEKKKVVSKGSE KRLRKERGELEKIIF+LFERQPYWTSKQLIQETDQPEQY
Sbjct: 181 MDVLSFGAAEKKKVVSKGSENKRLRKERGELEKIIFRLFERQPYWTSKQLIQETDQPEQY 240

Query: 241 MKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 278
           MKEILKDLCVYNNKGVHQGTYELKPEY+E+ EETKPR
Sbjct: 241 MKEILKDLCVYNNKGVHQGTYELKPEYKETCEETKPR 276

[Close]

BLAST of Chy9G164180 vs. NCBI nr
Match: XP_008465665.1 (PREDICTED: general transcription factor IIF subunit 2 isoform X2 [Cucumis melo])

HSP 1 Score: 534 bits (1376), Expect = 4.44e-191
Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MDVDGKSIDRSTSRKHQTN NNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS
Sbjct: 1   MDVDGKSIDRSTSRKHQTNNNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSY+LNMSTDFIPMSVFSESS
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYTLNMSTDFIPMSVFSESS 120

Query: 121 QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPG 180
           QGKFT+EGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGHMRPMPG
Sbjct: 121 QGKFTVEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRPMPG 180

Query: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240
           MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY
Sbjct: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240

Query: 241 MKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 277
           MKEILKDLCVYNNKGVHQGTYELKPEY+ESSEETKPR
Sbjct: 241 MKEILKDLCVYNNKGVHQGTYELKPEYKESSEETKPR 277

[Close]

BLAST of Chy9G164180 vs. NCBI nr
Match: XP_004143805.1 (general transcription factor IIF subunit 2 isoform X3 [Cucumis sativus] >KGN51637.2 hypothetical protein Csa_008814 [Cucumis sativus])

HSP 1 Score: 533 bits (1372), Expect = 1.81e-190
Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MDVDGKSIDRSTSRKHQTN N+IVVGTDFLETNKADRAMWLLKCPQ+VTRALSNSPDAPS
Sbjct: 1   MDVDGKSIDRSTSRKHQTNNNSIVVGTDFLETNKADRAMWLLKCPQLVTRALSNSPDAPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120

Query: 121 QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPG 180
           QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGHMRPMPG
Sbjct: 121 QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRPMPG 180

Query: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240
           MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY
Sbjct: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240

Query: 241 MKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 277
           MKEILKDLCVYNNKGVHQGTYELKPEYRESSE+TKPR
Sbjct: 241 MKEILKDLCVYNNKGVHQGTYELKPEYRESSEDTKPR 277

[Close]

BLAST of Chy9G164180 vs. NCBI nr
Match: XP_008465664.1 (PREDICTED: general transcription factor IIF subunit 2 isoform X1 [Cucumis melo])

HSP 1 Score: 528 bits (1359), Expect = 2.16e-188
Identity = 272/283 (96.11%), Postives = 275/283 (97.17%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MDVDGKSIDRSTSRKHQTN NNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS
Sbjct: 1   MDVDGKSIDRSTSRKHQTNNNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSY+LNMSTDFIPMSVFSESS
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYTLNMSTDFIPMSVFSESS 120

Query: 121 Q------GKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGH 180
           Q      GKFT+EGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGH
Sbjct: 121 QDSSFVLGKFTVEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGH 180

Query: 181 MRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQET 240
           MRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQET
Sbjct: 181 MRPMPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQET 240

Query: 241 DQPEQYMKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKPR 277
           DQPEQYMKEILKDLCVYNNKGVHQGTYELKPEY+ESSEETKPR
Sbjct: 241 DQPEQYMKEILKDLCVYNNKGVHQGTYELKPEYKESSEETKPR 283

[Close]

BLAST of Chy9G164180 vs. NCBI nr
Match: XP_038889594.1 (general transcription factor IIF subunit 2-like [Benincasa hispida] >XP_038889595.1 general transcription factor IIF subunit 2-like [Benincasa hispida] >XP_038889596.1 general transcription factor IIF subunit 2-like [Benincasa hispida])

HSP 1 Score: 504 bits (1298), Expect = 3.19e-179
Identity = 260/276 (94.20%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MDVDGKSIDR +SRK Q N NN VVGTDFLETNKADRAMWLLKCPQVVTRALSNSPD PS
Sbjct: 1   MDVDGKSIDRCSSRKLQIN-NNSVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDGPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESS 120
           RPVAKVIVSVDPLQSNDDDDSSSTEFTMELA TDSGN LRSYSLNMSTDFIPMSVFSESS
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEFTMELAGTDSGNTLRSYSLNMSTDFIPMSVFSESS 120

Query: 121 QGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPG 180
           QGKFT+EGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGHMRPMPG
Sbjct: 121 QGKFTVEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRPMPG 180

Query: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQY 240
           MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIF+LFERQ YWTSKQLIQETDQPEQY
Sbjct: 181 MDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFRLFERQSYWTSKQLIQETDQPEQY 240

Query: 241 MKEILKDLCVYNNKGVHQGTYELKPEYRESSEETKP 276
           MKEILKDLCVYNNKGVHQGTYELKPEY+ES EE KP
Sbjct: 241 MKEILKDLCVYNNKGVHQGTYELKPEYKESGEEAKP 275

[Close]

BLAST of Chy9G164180 vs. NCBI nr
Match: XP_031741396.1 (general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 504 bits (1298), Expect = 3.40e-178
Identity = 272/340 (80.00%), Postives = 275/340 (80.88%), Query Frame = 0


Query: 1   MDVDGKSIDRSTSRKHQTNKNNIVVGTDFLETNKADRAMWLLKCPQVVTRALSNSPDAPS 60
           MDVDGKSIDRSTSRKHQTN N+IVVGTDFLETNKADRAMWLLKCPQ+VTRALSNSPDAPS
Sbjct: 1   MDVDGKSIDRSTSRKHQTNNNSIVVGTDFLETNKADRAMWLLKCPQLVTRALSNSPDAPS 60

Query: 61  RPVAKVIVSVDPLQSNDDDDSSSTE----------------------------------- 120
           RPVAKVIVSVDPLQSNDDDDSSSTE                                   
Sbjct: 61  RPVAKVIVSVDPLQSNDDDDSSSTEVVSFQDPNLLIDKVAGIHGSFSPEQAEKFFKGPGG 120

Query: 121 ----------------------------FTMELASTDSGNALRSYSLNMSTDFIPMSVFS 180
                                       FTMELASTDSGNALRSYSLNMSTDFIPMSVFS
Sbjct: 121 PDPNPIDIWRVEKSNSRLTVFAFQNSEMFTMELASTDSGNALRSYSLNMSTDFIPMSVFS 180

Query: 181 ESSQGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRP 240
           ESSQGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDH TGGHMRP
Sbjct: 181 ESSQGKFTIEGKILNKFDMKPHDQNLERYGKLCRERTHKSMTKSRQIQVIDHVTGGHMRP 240

Query: 241 MPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQP 277
           MPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQP
Sbjct: 241 MPGMDVLSFGAAEKKKVVSKGSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQP 300

[Close]

BLAST of Chy9G164180 vs. TAIR 10
Match: AT3G52270.1 (Transcription initiation factor IIF, beta subunit )

HSP 1 Score: 284.6 bits (727), Expect = 8.3e-77
Identity = 146/252 (57.94%), Postives = 191/252 (75.79%), Query Frame = 0


Query: 30  LETNKADRAMWLLKCPQVVTRALSN--------SPDAPSRPVAKVIVSVDPLQSNDDDDS 89
           LET  A+R+M L+K P +V  +L +         PD P RP AKVI+ VDPL   D+   
Sbjct: 23  LETGLAERSMLLMKAPSLVASSLQSHSFPDDPYRPDDPYRPDAKVILGVDPLAHEDE--- 82

Query: 90  SSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESSQGKFTIEGKILNKFDMKPHDQ 149
             T+F MELA  DSGN  R Y+L+MS DFIPM+VF ESS GK ++EGKI NKFDM+PH++
Sbjct: 83  -GTQFVMELARADSGNMPRRYTLDMSKDFIPMNVFCESSDGKMSVEGKIKNKFDMRPHNE 142

Query: 150 NLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGMDVLSFGAAEKKKVVSKGSET 209
           N+E YG+LCRERT+K M K+RQIQVID+A G HMRPMPGM ++   A EKKK+ ++ SE 
Sbjct: 143 NIESYGRLCRERTNKYMGKNRQIQVIDNARGMHMRPMPGM-IIPTAAPEKKKLTNRTSEM 202

Query: 210 KRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVHQGTY 269
           KR R++R E+E+++F LFERQ  WT + LIQETDQPEQ++K++LKDLC+YNNKG +QGTY
Sbjct: 203 KRTRRDRREMEEVMFNLFERQSNWTLRLLIQETDQPEQFLKDLLKDLCIYNNKGSNQGTY 262

Query: 270 ELKPEYRESSEE 274
           ELKPEY+++++E
Sbjct: 263 ELKPEYKKATQE 269

[Close]

BLAST of Chy9G164180 vs. TAIR 10
Match: AT1G75510.1 (Transcription initiation factor IIF, beta subunit )

HSP 1 Score: 246.1 bits (627), Expect = 3.3e-65
Identity = 133/256 (51.95%), Postives = 178/256 (69.53%), Query Frame = 0


Query: 30  LETNKADRAMWLLKCPQVVTRALSN----------SPDAPSRPVAKVIVSVDPLQSNDDD 89
           L+  K+DR++WL+KCP VV +A             S D+P   +AK++  VDPL+     
Sbjct: 7   LDIEKSDRSIWLMKCPVVVDKAWHKIAASSSSSFASSDSPP-DMAKIVREVDPLR----- 66

Query: 90  DSSSTEFTMELASTDSGNALRSYSLNMSTDFIPMSVFSESSQGKFTIEGKILNKFDMKPH 149
           D S  EF M +   + GN  + Y+LNM TDF+PM  FS+ +QG    EGK+ +KFDMKP+
Sbjct: 67  DDSPPEFKMYMVGAEYGNMPKCYALNMFTDFVPMGGFSDVNQGCAAAEGKVDHKFDMKPY 126

Query: 150 DQNLERYGKLCRERTHKSMTKSRQIQVIDHATGGHMRPMPGM-DVLSFGAAEKKKVVS-K 209
            + +E Y +LCRERT K+M K+RQIQVID+  G HMRPMPGM  ++S  + EK+K    K
Sbjct: 127 GETIEEYARLCRERTSKAMVKNRQIQVIDNDRGVHMRPMPGMLGLVSSNSKEKRKPPPVK 186

Query: 210 GSETKRLRKERGELEKIIFKLFERQPYWTSKQLIQETDQPEQYMKEILKDLCVYNNKGVH 269
            +E KR R++RGELE I+FKLFE QP WT KQL+QETDQP Q++KEIL +LCVYN +G +
Sbjct: 187 QTEVKRTRRDRGELEAIMFKLFEGQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGSN 246

Query: 270 QGTYELKPEYRESSEE 274
           QGTYELKPEY++S+E+
Sbjct: 247 QGTYELKPEYKKSAED 256

The following BLAST results are available for this feature:

BLAST of Chy9G164180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01750	5.1e-15	27.78	General transcription factor IIF subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2...	[more]
Q2T9L9	6.7e-15	27.38	General transcription factor IIF subunit 2 OS=Bos taurus OX=9913 GN=GTF2F2 PE=2 ...	[more]
P41900	6.7e-15	27.80	General transcription factor IIF subunit 2 OS=Drosophila melanogaster OX=7227 GN...	[more]
Q8R0A0	2.0e-14	27.38	General transcription factor IIF subunit 2 OS=Mus musculus OX=10090 GN=Gtf2f2 PE...	[more]
P13984	7.4e-14	27.38	General transcription factor IIF subunit 2 OS=Homo sapiens OX=9606 GN=GTF2F2 PE=...	[more]

BLAST of Chy9G164180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPB8	7.4e-150	98.19	Transcription initiation factor IIF subunit beta OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3CPE2	6.9e-148	96.11	Transcription initiation factor IIF subunit beta OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1BZ89	1.4e-137	91.01	Transcription initiation factor IIF subunit beta OS=Momordica charantia OX=3673 ...	[more]
A0A6J1JIQ3	1.0e-135	90.25	Transcription initiation factor IIF subunit beta OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1HK34	3.0e-135	89.89	Transcription initiation factor IIF subunit beta OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Chy9G164180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465665.1	4.44e-191	98.19	PREDICTED: general transcription factor IIF subunit 2 isoform X2 [Cucumis melo]	[more]
XP_004143805.1	1.81e-190	98.19	general transcription factor IIF subunit 2 isoform X3 [Cucumis sativus] >KGN5163...	[more]
XP_008465664.1	2.16e-188	96.11	PREDICTED: general transcription factor IIF subunit 2 isoform X1 [Cucumis melo]	[more]
XP_038889594.1	3.19e-179	94.20	general transcription factor IIF subunit 2-like [Benincasa hispida] >XP_03888959...	[more]
XP_031741396.1	3.40e-178	80.00	general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus]	[more]

BLAST of Chy9G164180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52270.1	8.3e-77	57.94	Transcription initiation factor IIF, beta subunit	[more]
AT1G75510.1	3.3e-65	51.95	Transcription initiation factor IIF, beta subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040450	TFIIF beta subunit, HTH domain	PFAM	PF02270	TFIIF_beta	coord: 205..268 e-value: 5.3E-22 score: 77.7
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 203..269 e-value: 5.0E-31 score: 108.6
IPR003196	Transcription initiation factor IIF, beta subunit	PANTHER	PTHR10445	GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2	coord: 17..274
None	No IPR available	PANTHER	PTHR10445:SF2	TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT	coord: 17..274
None	No IPR available	CDD	cd07980	TFIIF_beta	coord: 30..138 e-value: 1.00051E-15 score: 70.0484
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 204..269
IPR011039	Transcription Factor IIF, Rap30/Rap74, interaction	SUPERFAMILY	50916	Rap30/74 interaction domains	coord: 30..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G164180.1	Chy9G164180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006366	transcription by RNA polymerase II
cellular_component	GO:0005674	transcription factor TFIIF complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008168	methyltransferase activity