Chy9G164120 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTACTCCATCAGTTCCGGGGGTATGCTTTGTTACAATTATTTGTTTTAATCTCTTCTTAATTGTTAGTGTATCAGTCGCATTCAGATCTCGCAGTTTGTCTCTTCTATCTTCGAATGTGTATTCCAGATCTTGACATTTTCTCGAAATTCAGCAACGTTTCGATTGATATTTTTGTTTTATGTTGTATTTGGACAGGGCTCTGGTTCGTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCCGTTGTGCTAATTGGCGGGCATATCTTGGTTCAGCTTTTTCCTGTGGTTGTTAACTATCTTGCTCTTATTCCAGCCAGGTACCTCGTTTTGGAGAATTTAGTTTTTTATTAGAGCGAAAACTGTGCGAAGCTGGTATAGTTTCATGGCTGAATATATGCGATGCTTACGTTATTGAAGTAATGCCAGTAGGTTTCTGGTTAAAAGTGTGTTTTTTTTATCGAGTTGAAATTTAGTAAGGAAAGAGTCTAGAATCGTTTTATCGAGTTGAAATTTAGTAAGGAAAGAGTCTAGAATCTTGTGACCACTGATGATTGAATAACTGTGTAAGATAGGATTTCAGGCGGGGGGGGGGGTGTGTGTGTGTGTGTGGAAGGTATTTGTTACAAGTTTTGCATGTTACATACTTGTGAATTGTGATCCAGAGGCATGTGTAGAAAGATTGATGGAAGTTAGTCAATAATGTAGTTTCCAAGCTTGGAAATGTGGTCAAAATAATAAGTTGTGATGTTATTGGCAATTCCACTATTTAATTTATTGGCCAAACCATCCATGTATCGTTTTGCCATACTTCAGAACGAAACGTTTATGTTGGTAGGAAGTAGCAACAAACCTTTTGAGAGGCTACACAATCTACTGCCTGAGTGTACTATTTTGATATATAGAACTCTTTCATTTTATTTTATTTTTCTAGTGAAGAATCCAAAGATGTTATTACCTCCATGCAACCAGATGTTTTCACTACTAACCAATCTGAATTATTGACTCTACAAAATAATTAGAGGAAACACCTACATGAGTGTGAAATGTGAACCCCTTATCATTTTGAATTGGCTTTATTCCCTGATAGAAAAAAAAAGATGGTTATAAGATTAGAAATATAGAGAAAGATGTCCACAATAGAAAAAAGAAATTACAGAAAAATCAATCCATGTTGAGCTGTATAAATATGTAAAACTGAGCCCAAAATCTGAATGTTCACATTCATAGACCAGCAAGAGGTAGAATATAAATATCTTTTATCTGAAAAATTCTCCATGTGAATATTTTTCTTAGAAAATAAGAGTCTTCCTGTCCAACCAAACTACTCAATGAAGAGCTGAAATTGCATATTCTCGATATGACCTTGCTCTTTTACCGGTCACCTTTTGAAGTAAACCTAATTATTGGAGTATGTGCCTCGCCTCATGCACATCTCTTAGGGAAACCTAACAGATTTAATTCAGAAGAAAAGAACTCTGAATTTGTTACAAAATTCAAAATGGAGAAAAATGTCACTTACCAAAGAAGCGAGGATCCATTATTTTAGGCAAGACATGGTGATTGATGTGATAGCATAGGTAATGGAGCCTCGATCAACTGCAAGTTATGAGTTCTTGTGTACGGTGGACAATTGGACATACATTTAAACACTTAGTAGATTAGTTGAGATACTTATCTTTTCAGTTACAATGCAGTAAATACTAAATACGACTGCATGCCATTTAGGTAACTTTCCTCACGAGGAGACTCAATTTGGGTATGAAAATTTTGTATTTCCTTCTCATTGACTGATCATCAAAATTCCAAATTTGTCATTGTCATTCAGTATTCTATCAACACTTTCCATCTCAGTTTCTTGTATATAGATTTATCAAGCTAAGTCCATATTGATTCTCCGACTCTTAATTTTAACGAATAAGATTACATATCGTAATGAAGAAATTTTTGCCTAGTTTAATTAATTAATTAAATTTATTTGTATGATGTGAGAATATTTCCTCTGAATTGATTAAAGTTCATTGATGGCCTTAGTATTTGACCAACTTTTAAGTTAAATTTTAATGGATAATGTGTAAACTATAAATGGTGGTTGGGTCATTCATTCCTTTGAACTTCTATTTTGTAGGACAATACCTTTTGCCTGGAATCTCCTAACAGCTGGTTATATTGAACAGTCAATATATGGGGTATGCAACCAAATTGTCGTGCACTAATTTTTGTTCCATTTACAGAGTAACGGTTTGAATTTATCTCACTATTTCTTAGTCATTTCTCCACTCGAAGTTAGACTCACAGAGAGCAATATATTGCAGGGTGTTGTCAGCACAGTTGGCCTCCTGTTTGTTGGAAAGCTGCTTGAACCCATATGGGGATCTAGAGAATTTTTGAAGTTCATCTTTGTAGTCAATTTTCTAACTTCCTTATGTGTCTTTATCACAGCAATTGCCCTGTACTATATTACACAGGAGGAAAGTTATCTGTAAGTGCTACTGAGTCATCGTGCATCAGGCACACCTTTTAGGCATACTTGTGTACATGTCTTTAACTGATTGAGCATTCTGTTAATATCATCACTCAAAACTGTTTTAATCCATTTAGATTTTCATTCAAGTAAACTCTGTCTGATTCTTTTCCAAATCAGTATTTCTCAATTTGTCCTCCTCTTTAAACATGTTTCCTGCGCTGCTCCCAGGTTTTCCAGACATCTTATTTACATCTTTTTGTGGTGTCAGTTATTTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGATTCTTGGTTGGGATCAAACAAATGATACCTGATCAAGAGTTGCCAGTATTGAAACTAAAAGCTAAGGTATGAAAAATGTAGATAGATATATCCTAATTTCGAATAATTTTTTATCAGAGTTTTATTTGAACCCTCTTTCTGGCCTTCGCTTGCAATTTCATTCAGTGGTTGCCATTTCTTGCTGTATTGTTATCCATTGCCGTAAGCTTTTGGACAACAGGAGCTGCAACATATCTCCCAACAATAATATTTGGGACATATATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCGTTCTCTACATTCTTCCCTGAACTTTTACGGTATAATGTTTTGTTTTGAAGCCTTTTCTATTTTTAAGCACCTGTTCCTCATGTTTCAGGAATACTCTGTGTTCTCTCTCCATACTGTAGTATACTATGAGTCTTGATGGTTGTGTGCAGGCCAGTCATTGATCCAATTGCATCAATATTTCATCGTATGCTTTGTGGAAGATCTGAATCCCCTGACAATGCTGAGGACTATGCTGCTGCAGGCGCCCTGCTTCCCGGTTCAGATCCAATTGAGGCATCTAGAAGAAGGTAATATTTGTTATTACTTCTCTCCTGACATACTACAAGTGTTTTCACTTTTAGCAAGTTCTGTAGCTTGCAGAAGACCTGCTTTTTTGTTTTAAATGGCTTGAGGTAGACAGGACAAAGCAAGAAATTATAACTAATTGGAAAGAGTACTAAATTTTAAAATTTAAGCTTACTATTTAAAATTTTATTTTGGGGCCAAATTAGGAGTTCGAAATTTGTTTTATTATCTAGAAATTAGGTGCTACATTTAAAATTAAAAATTTTATGTATAACTGTCAAATTCAAATATTGAATTCCCATCCGCTCACTATATGCATCTACCTTAGTGGTGATGTTTCGCTCTTTATATGCATCTTTTCACTTTGTGCTTTGACTGCAGAAGAGGTACCCTATTAACCACCCACCTTGATGAACATGAACATTGTTGTCAGCACTTTTTCGAAAAGAAAACCATCCAAAGGGGGTGACAGGGTGTCAACCCACGGGGAAAGAGAGGATTTTTAAATCAAAATCAAAAGGGGGGAGGGTAATTTTGAATGGGCCCAATATTAAGTGCTCAAAGGAAAGGATGGTTGAACACCCGTCAAGACAATTGTTTATAAAGAAAGTTGGTTTAGTAGGTTAAGAGGTCATAGGTTCAATTCATGATGGTTACCTATCTGGGTTTTAACATCCTCCGACTTTTCTTGACACCCAAATGTCGTAGGGTTAGGTTGGTTATCCTGTAAGATTAGTTGAGATGTGTGTAAACTGATCTGGATCACTCATGGATATTTAAAAAAAATGGAAGCTAGAAAAGAAAAAAAAAAAAGTTTCTATAAGTGTTTCATTTGTTAGAAGTGGAACTGAAGCTAGAAAAGCAAAAACAAAAGAACGATATAAACATGAAGAAAATGTGTATGGCGAAAAATATAAAGAACTTGTTGGAGAGAAGAGAATACTCATAAAATTTGAAAATTGTACTCATTTCAGAGAAAGGGGAGCCAGAGCTTTGGAAGAAAGACTGGCAGCTGAAAGATTGGCGGCAGCCAGAAGTGCTGAAGAGTCAGGAAAAGATGCAACAGAGAATGTGTGA ATGAGTACTCCATCAGTTCCGGGGGGCTCTGGTTCGTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCCGTTGTGCTAATTGGCGGGCATATCTTGGTTCAGCTTTTTCCTGTGGTTGTTAACTATCTTGCTCTTATTCCAGCCAGGACAATACCTTTTGCCTGGAATCTCCTAACAGCTGGTTATATTGAACAGTCAATATATGGGGGTGTTGTCAGCACAGTTGGCCTCCTGTTTGTTGGAAAGCTGCTTGAACCCATATGGGGATCTAGAGAATTTTTGAAGTTCATCTTTGTAGTCAATTTTCTAACTTCCTTATGTGTCTTTATCACAGCAATTGCCCTGTACTATATTACACAGGAGGAAAGTTATCTTTATTTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGATTCTTGGTTGGGATCAAACAAATGATACCTGATCAAGAGTTGCCAGTATTGAAACTAAAAGCTAAGTGGTTGCCATTTCTTGCTGTATTGTTATCCATTGCCGTAAGCTTTTGGACAACAGGAGCTGCAACATATCTCCCAACAATAATATTTGGGACATATATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCGTTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATTGATCCAATTGCATCAATATTTCATCGTATGCTTTGTGGAAGATCTGAATCCCCTGACAATGCTGAGGACTATGCTGCTGCAGGCGCCCTGCTTCCCGGTTCAGATCCAATTGAGGCATCTAGAAGAAGAGAAAGGGGAGCCAGAGCTTTGGAAGAAAGACTGGCAGCTGAAAGATTGGCGGCAGCCAGAAGTGCTGAAGAGTCAGGAAAAGATGCAACAGAGAATGTGTGA ATGAGTACTCCATCAGTTCCGGGGGGCTCTGGTTCGTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCCGTTGTGCTAATTGGCGGGCATATCTTGGTTCAGCTTTTTCCTGTGGTTGTTAACTATCTTGCTCTTATTCCAGCCAGGACAATACCTTTTGCCTGGAATCTCCTAACAGCTGGTTATATTGAACAGTCAATATATGGGGGTGTTGTCAGCACAGTTGGCCTCCTGTTTGTTGGAAAGCTGCTTGAACCCATATGGGGATCTAGAGAATTTTTGAAGTTCATCTTTGTAGTCAATTTTCTAACTTCCTTATGTGTCTTTATCACAGCAATTGCCCTGTACTATATTACACAGGAGGAAAGTTATCTTTATTTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGATTCTTGGTTGGGATCAAACAAATGATACCTGATCAAGAGTTGCCAGTATTGAAACTAAAAGCTAAGTGGTTGCCATTTCTTGCTGTATTGTTATCCATTGCCGTAAGCTTTTGGACAACAGGAGCTGCAACATATCTCCCAACAATAATATTTGGGACATATATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCGTTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATTGATCCAATTGCATCAATATTTCATCGTATGCTTTGTGGAAGATCTGAATCCCCTGACAATGCTGAGGACTATGCTGCTGCAGGCGCCCTGCTTCCCGGTTCAGATCCAATTGAGGCATCTAGAAGAAGAGAAAGGGGAGCCAGAGCTTTGGAAGAAAGACTGGCAGCTGAAAGATTGGCGGCAGCCAGAAGTGCTGAAGAGTCAGGAAAAGATGCAACAGAGAATGTGTGA MSTPSVPGGSGSFTGFTKLCKGLAVVLIGGHILVQLFPVVVNYLALIPARTIPFAWNLLTAGYIEQSIYGGVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPFLAVLLSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFHRMLCGRSESPDNAEDYAAAGALLPGSDPIEASRRRERGARALEERLAAERLAAARSAEESGKDATENV* Homology
BLAST of Chy9G164120 vs. ExPASy Swiss-Prot
Match: Q8LF05 (Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 6.1e-118 Identity = 215/308 (69.81%), Postives = 252/308 (81.82%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy Swiss-Prot
Match: Q12893 (Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.5e-28 Identity = 87/260 (33.46%), Postives = 138/260 (53.08%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy Swiss-Prot
Match: Q9WUH1 (Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.9e-28 Identity = 91/276 (32.97%), Postives = 147/276 (53.26%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy Swiss-Prot
Match: A4FUB8 (Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27 Identity = 87/260 (33.46%), Postives = 138/260 (53.08%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy Swiss-Prot
Match: Q12239 (Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOL107W PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11 Identity = 68/274 (24.82%), Postives = 130/274 (47.45%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy TrEMBL
Match: A0A0A0KQN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 2.2e-163 Identity = 301/308 (97.73%), Postives = 304/308 (98.70%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy TrEMBL
Match: A0A5D3C5G3 (Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00860 PE=4 SV=1) HSP 1 Score: 577.0 bits (1486), Expect = 4.7e-161 Identity = 297/308 (96.43%), Postives = 302/308 (98.05%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy TrEMBL
Match: A0A1S3CPF3 (rhomboid-like protein 19 OS=Cucumis melo OX=3656 GN=LOC103503313 PE=4 SV=1) HSP 1 Score: 577.0 bits (1486), Expect = 4.7e-161 Identity = 297/308 (96.43%), Postives = 302/308 (98.05%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy TrEMBL
Match: A0A6J1C1K7 (rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153 Identity = 276/308 (89.61%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Chy9G164120 vs. ExPASy TrEMBL
Match: A0A6J1JXD8 (rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111489172 PE=4 SV=1) HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152 Identity = 276/308 (89.61%), Postives = 293/308 (95.13%), Query Frame = 0
BLAST of Chy9G164120 vs. NCBI nr
Match: XP_004143801.1 (rhomboid-like protein 19 [Cucumis sativus] >KGN51209.1 hypothetical protein Csa_009262 [Cucumis sativus]) HSP 1 Score: 579 bits (1492), Expect = 1.02e-207 Identity = 301/308 (97.73%), Postives = 304/308 (98.70%), Query Frame = 0
BLAST of Chy9G164120 vs. NCBI nr
Match: XP_008465676.1 (PREDICTED: rhomboid-like protein 19 [Cucumis melo] >KAA0040585.1 rhomboid-like protein 19 [Cucumis melo var. makuwa] >TYK05626.1 rhomboid-like protein 19 [Cucumis melo var. makuwa]) HSP 1 Score: 571 bits (1472), Expect = 1.13e-204 Identity = 297/308 (96.43%), Postives = 302/308 (98.05%), Query Frame = 0
BLAST of Chy9G164120 vs. NCBI nr
Match: XP_038890538.1 (rhomboid-like protein 19 isoform X1 [Benincasa hispida]) HSP 1 Score: 556 bits (1432), Expect = 1.41e-198 Identity = 285/308 (92.53%), Postives = 299/308 (97.08%), Query Frame = 0
BLAST of Chy9G164120 vs. NCBI nr
Match: XP_023551332.1 (rhomboid-like protein 19 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 547 bits (1410), Expect = 3.18e-195 Identity = 278/308 (90.26%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Chy9G164120 vs. NCBI nr
Match: XP_022134278.1 (rhomboid-like protein 19 [Momordica charantia]) HSP 1 Score: 546 bits (1408), Expect = 6.42e-195 Identity = 276/308 (89.61%), Postives = 295/308 (95.78%), Query Frame = 0
BLAST of Chy9G164120 vs. TAIR 10
Match: AT3G07950.1 (rhomboid protein-related ) HSP 1 Score: 425.2 bits (1092), Expect = 4.4e-119 Identity = 215/308 (69.81%), Postives = 252/308 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|