Chy9G162820 (gene) Cucumber (hystrix) v1

Overview


Name	Chy9G162820
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	mediator of RNA polymerase II transcription subunit 1 isoform X1
Location	chrH09: 6135128 .. 6139086 (-)
RNA-Seq Expression	Chy9G162820
Synteny	Chy9G162820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTGCTGGTGGCGGCAATTCAAACCACCATTTTCCGTCGTCTTCTTCCCACTCAGGTAGTGCTTTCTTTCTTTCTTTTTGTTTTCTTTTTTTATTGTTGCATGCTTCTAATGAGAGATGCACTCACTTACTGCTGACTTGCCTCTATTTTGATATTGTGAACGCTGTTAATGTGTATCCTATGTTATTGTGTAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGTTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATAGGTTAAACTTTGGAGATAATTGGGACCGTGACGCACATGACCCTCTTGGAAAGATTCTCTCCAACAGGATTGATAAAGATGCTTTGCGACGGTCCCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCATAGAAGAGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACAAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTCCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTCCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCACAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTCAATATGGCTGAAGCTTTGGTGCAGGCTCCATCTCGAGCTCGTGCTGCTCCCCAGGTATCTGAGGTACTATACCAACCTTCTTGTGCTGTATATTATTTTCTCCTTTTGATTTAACAGTCTCATCTTTTATCCCCACCTTGGTAGTTATCTGTCAAGACCCAAAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCAGTGACACCTTCTATGCCAAAAGCTATGGTAATTGGAGCTAATGCAAATTTTGAATCTTTGTTGTTAGATTTTTTCCTACCTACTTATATTTTAATTATTTGGTGTTTGTTGACAAAAAAATATGAAGGTTCGTACTTAAAATATATAAGAAAACTGAGAACAATCTGCACGGTACCTAGACAACTTGTGCCAATCTTTGATTTCAGCTGGGACTACTTTCCTTGAAGCTACTTTTGTGTTTTAGTATTATGGCTCATAAGATGTATATATAACAAAAGTTATTTTTGGGTAAATTATAGTGAAAATTATGCGACAAAGTTGCTAAATGTTTTGACATTTTTTCTGCGACGGCTGTTGGTGGCTGGTTGCTGGTGATATAAATTTTTGGATTTAGCCTGTTAAATAAACCCGGCTTCTGCATTTTAGGAACTGTAAATGTTTTTGTGGGAGTTTGTTATTCAGCTTCAACTTACTCTCATTGACTAAAGAACAGTGTGTTAGATTGCAGAAGTCAAAACATTTGTTAAAAATTTCGTAGCCATTTGCATTGTGTTAGATAACTAGACCATTTTCCCCCCAAATTTGATGAGAAAATCTATTTGAGAACGTCAAAATGATTGGGCGACAGGTGTTTTCTTTCCTGGCTCCTTTTGGAAATTTGTAAGAACTAGATAATAGGAAGGAGATAACCAGATTTTATTTGGCCTTTGGGATTCATTCCATAGTATGCATATTTGTGCTTTGCTACTTTTGACACTTTACAGACTGAATTATCTTTGGTTGATCACTTTTTGTTCTCTCTCAAGGATGGAAAAGGCCAATGTTAGATTAAATATGCTTTAAAGGAAGTGTAAAGTTTATTTGAGATTGTTGTGCTGTAGTCAATGTCACTGATGGCTGATTTTCTTTGTTTGTTAACGTGTTATATTTGATAGGCAAGTTTTCTGTTAACTGAATGTCAACCCCTCTTCAGTATCAATAGTTGTAACTTGACTGAGTATTTCTCTTGTAAAAGGTTCATTGTCTTCTGTTTTGTCTTTTGAAGATGATGTAAATTATTGTTGAGTTTCAGTATGGTGTTGTAATAGACTTGCTTAGTAGTAAACTATCTGGCCTAGTGGTAAAAAGGAAGATATAGTCTTAAATTTTTTATATCTAACTAAGAGGTTATGGATTCAATCCATGGTGGCCAAATTAATTTTCTACTAGTTTTCTTGACACCCAAATGTTGTAGGGTCAGATAGGTTGTTCCGTGACATTAGTCGAGGTGCGAGTAAACTGGCCTGGACACTCACGGTTACCTGAAAAAAAGACTTGCTTTGGAGTATAGTTCTTAAAATAGTTTTAAAACAAAAAAAACTTGTACTATTTTGTTGTGTTTTATTTAATGATTTCAAAACTAATTTATACACATCTGATCAATAGTCTTGTAAAATTTTAAATAAATTTCAATATGTTATTCTTATTTTTACATTCTGAAGAAATAAATGACAATTAAAAAGTAGACCATATCTTTGCTGATAATTTTTAGTAGACTTGTCTGTGAATTTTGACAATTTTGACAATTTTGACATAATGCATCCAAGAAGTTCACCCTTTTAATATGAATGTAGTTAGTTTTTTTATGTTTTGAATAACCCCCTCTCCTCCCCCCCACCCCCAAATACCATGGTAAATTTCTACAACGGTGTATTGATTTTAACTTCCATCTCAGCACTAAACATATCTAGGAATACTTATCTCTCATTATTATATCTGACTGCAAATCTTCTGTTTCCTCCCTTAGGTAATCGTTAGTGTTTTTTTGTTTGACAGGTGCTTAGTTCTTCAGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCCTTGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCATGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCGACTAGTAATGCAAACAGCATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTATGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACCGGAACAACATTGGAAAAAAGACCATCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAAGCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCTTCAATTGGCCAATCTAATGAACTAACAAGCTCAGAAATGGGCACCGCAAGTCCTCGTGTAATTGAAAATGGTGCTGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAGTATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGGTAAATATATAATATTTCTATTGCTCTGCCTTGGGTTTTCAAAGTGTACTGTTTTTTTCTCTGTTAGCTGATGAAATTATAAATGTAATTATTAATTTTGCAGTACATGAACTTGAAGCCATCTCTAAAAATAGGTCGATGCATTCAGCCAAAGATATTTGTGCCATCTGAATCTCGTGAGGACAGCAAGGATGATGAAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGA

mRNA sequence

ATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTGCTGGTGGCGGCAATTCAAACCACCATTTTCCGTCGTCTTCTTCCCACTCAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGTTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATAGGTTAAACTTTGGAGATAATTGGGACCGTGACGCACATGACCCTCTTGGAAAGATTCTCTCCAACAGGATTGATAAAGATGCTTTGCGACGGTCCCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCATAGAAGAGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACAAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTCCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTCCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCACAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTCAATATGGCTGAAGCTTTGGTGCAGGCTCCATCTCGAGCTCGTGCTGCTCCCCAGGTATCTGAGTTATCTGTCAAGACCCAAAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCAGTGACACCTTCTATGCCAAAAGCTATGGTGCTTAGTTCTTCAGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCCTTGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCATGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCGACTAGTAATGCAAACAGCATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTATGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACCGGAACAACATTGGAAAAAAGACCATCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAAGCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCTTCAATTGGCCAATCTAATGAACTAACAAGCTCAGAAATGGGCACCGCAAGTCCTCGTGTAATTGAAAATGGTGCTGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAGTATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAAATAGGTCGATGCATTCAGCCAAAGATATTTGTGCCATCTGAATCTCGTGAGGACAGCAAGGATGATGAAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGA

Coding sequence (CDS)

ATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTGCTGGTGGCGGCAATTCAAACCACCATTTTCCGTCGTCTTCTTCCCACTCAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGTTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATAGGTTAAACTTTGGAGATAATTGGGACCGTGACGCACATGACCCTCTTGGAAAGATTCTCTCCAACAGGATTGATAAAGATGCTTTGCGACGGTCCCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCATAGAAGAGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACAAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTCCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTCCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCACAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACATCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTCAATATGGCTGAAGCTTTGGTGCAGGCTCCATCTCGAGCTCGTGCTGCTCCCCAGGTATCTGAGTTATCTGTCAAGACCCAAAGGCTTGAGGAATTGGCTATTAAACAGTCCAGGCAATTAATACCAGTGACACCTTCTATGCCAAAAGCTATGGTGCTTAGTTCTTCAGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCCTTGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCATGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCGACTAGTAATGCAAACAGCATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTATGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACCGGAACAACATTGGAAAAAAGACCATCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAAGCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCTTCAATTGGCCAATCTAATGAACTAACAAGCTCAGAAATGGGCACCGCAAGTCCTCGTGTAATTGAAAATGGTGCTGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAGTATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAAATAGGTCGATGCATTCAGCCAAAGATATTTGTGCCATCTGAATCTCGTGAGGACAGCAAGGATGATGAAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGA

Protein sequence

MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRSSFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKSPSIGQSNELTSSEMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDDEAGSELSSSDSEA*

Homology

[Close]

BLAST of Chy9G162820 vs. ExPASy TrEMBL
Match: A0A0A0KN63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1)

HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 606/615 (98.54%), Postives = 609/615 (99.02%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVAGGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPL VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE 540
           PSIGQSNELTS EMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE
Sbjct: 481 PSIGQSNELTSEEMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE 540

Query: 541 EAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSK 600
           EAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DSK
Sbjct: 541 EAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDSK 600

Query: 601 DDEAGSELSSSDSEA 616
           DD AGSELSSSDSEA
Sbjct: 601 DDGAGSELSSSDSEA 615

[Close]

BLAST of Chy9G162820 vs. ExPASy TrEMBL
Match: A0A5D3DT29 (Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001070 PE=4 SV=1)

HSP 1 Score: 1104.7 bits (2856), Expect = 0.0e+00
Identity = 603/616 (97.89%), Postives = 606/616 (98.38%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP SVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540
           PSIGQSNELTS EMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDEAGSELSSSDSEA 616
           KDD AGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of Chy9G162820 vs. ExPASy TrEMBL
Match: A0A1S3CDT9 (mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1104.7 bits (2856), Expect = 0.0e+00
Identity = 603/616 (97.89%), Postives = 606/616 (98.38%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP SVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540
           PSIGQSNELTS EMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDEAGSELSSSDSEA 616
           KDD AGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of Chy9G162820 vs. ExPASy TrEMBL
Match: A0A1S3CC42 (mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 600/616 (97.40%), Postives = 603/616 (97.89%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP SVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540
           PSIGQSNELTS EMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDEAGSELSSSDSEA 616
           KDD AGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 613

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BLAST of Chy9G162820 vs. ExPASy TrEMBL
Match: A0A6J1FM76 (uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC111445235 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 4.0e-281
Identity = 543/617 (88.01%), Postives = 568/617 (92.06%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLR+TGSV GGGNSNHHF S S HSDVPS SQ RNR SKTTGDFDTSR 
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           +FLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRD+HDPLGK+
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSH-NSSNGILSGTSVGSSIQKAVFEK 180
           L NR+DKDALRRSHSMVSRKQ ELFHRRV T+LK+  NSSNG+  G SVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240
           DFPSLGSEEKQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQ SELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKP 360
           SRQLIPVTPSMPKA  L+SSDKSKPKLASRTGELN T+KGGQP P SVHANQSR GHVK 
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360

Query: 361 DAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 420
           DAQKSSHGKFLVLKP RENGVS  AKDVSSPTSN     ANSQFALAPSVPHAPLRSPNN
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSN-----ANSQFALAPSVPHAPLRSPNN 420

Query: 421 TNVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVK 480
           +NV+S+ERK+ASLDLK+GTTLEKRPSLSQVQSRNDFF LIKKKTSMSSSAVLSDSCSSVK
Sbjct: 421 SNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480

Query: 481 SPSIGQSNELTSSEMGT-ASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLD 540
           SPSIGQSNELT  E+ T ASP V+ENG VEN NG+SSEEV+ S DSGEKTE+HVAAESLD
Sbjct: 481 SPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLD 540

Query: 541 EEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRED 600
           EEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYM+LKPSLK+GR IQPKI VPSES ED
Sbjct: 541 EEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHED 600

Query: 601 SKDDEAGSELSSSDSEA 616
           SKD  AGSELSSSDSEA
Sbjct: 601 SKDG-AGSELSSSDSEA 611

[Close]

BLAST of Chy9G162820 vs. NCBI nr
Match: XP_004140377.1 (mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1115 bits (2884), Expect = 0.0
Identity = 606/615 (98.54%), Postives = 609/615 (99.02%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVAGGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPL VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE 540
           PSIGQSNELTS EMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE
Sbjct: 481 PSIGQSNELTSEEMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE 540

Query: 541 EAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSK 600
           EAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DSK
Sbjct: 541 EAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDSK 600

Query: 601 DDEAGSELSSSDSEA 615
           DD AGSELSSSDSEA
Sbjct: 601 DDGAGSELSSSDSEA 615

[Close]

BLAST of Chy9G162820 vs. NCBI nr
Match: XP_008460469.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo] >KAA0067384.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa] >TYK26525.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1107 bits (2864), Expect = 0.0
Identity = 603/616 (97.89%), Postives = 606/616 (98.38%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP SVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMGT-ASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540
           PSIGQSNELTS EMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDEAGSELSSSDSEA 615
           KDD AGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of Chy9G162820 vs. NCBI nr
Match: XP_011655200.1 (mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativus] >KGN51281.2 hypothetical protein Csa_009411 [Cucumis sativus])

HSP 1 Score: 1105 bits (2857), Expect = 0.0
Identity = 603/615 (98.05%), Postives = 606/615 (98.54%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVAGGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQ---LSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPL VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE 540
           PSIGQSNELTS EMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE
Sbjct: 481 PSIGQSNELTSEEMGTASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEE 540

Query: 541 EAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSK 600
           EAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DSK
Sbjct: 541 EAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDSK 600

Query: 601 DDEAGSELSSSDSEA 615
           DD AGSELSSSDSEA
Sbjct: 601 DDGAGSELSSSDSEA 612

[Close]

BLAST of Chy9G162820 vs. NCBI nr
Match: XP_008460470.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis melo])

HSP 1 Score: 1097 bits (2837), Expect = 0.0
Identity = 600/616 (97.40%), Postives = 603/616 (97.89%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP SVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSSEMGT-ASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540
           PSIGQSNELTS EMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDEAGSELSSSDSEA 615
           KDD AGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 613

[Close]

BLAST of Chy9G162820 vs. NCBI nr
Match: XP_038907227.1 (mediator of RNA polymerase II transcription subunit 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1015 bits (2624), Expect = 0.0
Identity = 564/618 (91.26%), Postives = 582/618 (94.17%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GG NSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGSNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGD+WDRD+ DPLGKI
Sbjct: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDSWDRDSPDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGE--LFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180
           LSN+IDKDALRRSHSMVSRK GE  LFHRR  TELK+HN+SNGILSGTSV SSIQKAVFE
Sbjct: 121 LSNKIDKDALRRSHSMVSRKLGERELFHRRAATELKNHNNSNGILSGTSVSSSIQKAVFE 180

Query: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIK 300
           TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARA PQVSELSVKTQRLEELAIK
Sbjct: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARATPQVSELSVKTQRLEELAIK 300

Query: 301 QSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLSVHANQSRVGHVK 360
           QSRQLIPVTPSM KAMVL+ SDKSKPKLASRTGELN TIKGGQ QPLSVHANQSR G VK
Sbjct: 301 QSRQLIPVTPSMTKAMVLNPSDKSKPKLASRTGELNVTIKGGQQQPLSVHANQSRGGLVK 360

Query: 361 PDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPN 420
            DAQKS+HGKFLVLKPVRENG+SLAAKDVSSPTSNANSMA NSQFALA +V HAPLRSPN
Sbjct: 361 SDAQKSAHGKFLVLKPVRENGISLAAKDVSSPTSNANSMAVNSQFALASAVAHAPLRSPN 420

Query: 421 NTNVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSSSAVLSDSCSSV 480
           NTNVSS+ERKIASLDLK+GTTLEKRPSLSQVQSRNDFF LIKKKTSMSS AVLSDSCSSV
Sbjct: 421 NTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSS-AVLSDSCSSV 480

Query: 481 KSPSIGQSNELTSSEMGT-ASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESL 540
           KSPSI  SNELT  E    ASPRVIENGAVENRNG+ SEEV+ S D+GEKTESHVAAESL
Sbjct: 481 KSPSISHSNELTREETDMPASPRVIENGAVENRNGDGSEEVRASCDTGEKTESHVAAESL 540

Query: 541 DEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRE 600
           DEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCI+PKIFVPSES E
Sbjct: 541 DEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIKPKIFVPSESHE 600

Query: 601 DSKDDEAGSELSSSDSEA 615
           DSKD  AGSELSSSDSEA
Sbjct: 601 DSKDG-AGSELSSSDSEA 616

[Close]

BLAST of Chy9G162820 vs. TAIR 10
Match: AT1G36990.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). )

HSP 1 Score: 412.9 bits (1060), Expect = 4.5e-115
Identity = 307/613 (50.08%), Postives = 384/613 (62.64%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLS-QSRNRISKTTGDFDTSR 60
           M++ E +L PEWLRS+G  +GGG+SNH   SSSSHSD  SL   SRNR S++  D D+  
Sbjct: 1   MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSASLQYNSRNRNSRSKSDVDSIH 60

Query: 61  SSFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDAHDPL 120
           S FLDR+SS+NSRR SSNGS+KHAYSS  FNR  RDKDR ++KDR+++ D WD D   PL
Sbjct: 61  SPFLDRSSSTNSRRGSSNGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPL 120

Query: 121 GKILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSS-----NGILSGTSVGSSI 180
             IL+ R D D LRRSHSMV+RKQGE   R +   L +  SS     NG+LSG S+G+S 
Sbjct: 121 RTILTGR-DPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSF 180

Query: 181 QKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVP 240
           Q+  F+KDFPSLG+EEKQ   ++ RVSSPG+SS VQ+LP+GNSALI GGEGWTSALAEVP
Sbjct: 181 QRTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVVQNLPVGNSALI-GGEGWTSALAEVP 240

Query: 241 SMIGSTTGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRL 300
           ++I      S       A S AG L+  +GLNMAEALVQAP+R    PQ    SVKTQRL
Sbjct: 241 NVIEKACTGSLTSPKANAVS-AGTLTGPSGLNMAEALVQAPARTHTPPQG---SVKTQRL 300

Query: 301 EELAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGE-LNATIKGGQPQPL----SV 360
           E+LAIKQSRQLIPV PS PK + L+SSDKSK K   RTGE   A  +    QP     S 
Sbjct: 301 EDLAIKQSRQLIPVVPSAPKGLSLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSF 360

Query: 361 HANQSRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQ-FALA 420
            +N S  G +KP+       K LVLKP RENGVS A K+  SP++N N+ AA+SQ  +  
Sbjct: 361 QSNPS--GQIKPEK------KLLVLKPARENGVS-AVKESGSPSANTNTRAASSQLMSNT 420

Query: 421 PSVPHAPLRSPNNTNVSSMERKIAS-LDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSM 480
            S   AP+RS N    S  E K AS   + +G T+EK+PS +Q QSR+ F+  +K+K + 
Sbjct: 421 QSTQSAPVRSTN----SPKELKGASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTA 480

Query: 481 SSSAVLSDSCSSVKSPSIGQSNELTSSEMGTASPRVIENGAVENRNGNSSEEVQVSRDSG 540
           S+S + +D  SS  S S     +L SS+   AS          +    S  EV  S    
Sbjct: 481 STS-ITTDPVSSSTSASSSVEVKLNSSKDLIASD-------PSSSQATSGVEVTDSVQVA 540

Query: 541 EKTESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCI 599
             T    A ++ DEEEA FLRSLGW E+ GE E LTEEEI+SF  +Y  L+P        
Sbjct: 541 SHTSGFEATDTPDEEEAQFLRSLGWVENNGE-EYLTEEEIDSFLEQYKELRP------LF 579

[Close]

BLAST of Chy9G162820 vs. TAIR 10
Match: AT4G08510.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). )

HSP 1 Score: 303.1 bits (775), Expect = 5.0e-82
Identity = 254/595 (42.69%), Postives = 338/595 (56.81%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVAGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           ME+ EP+LVPEWLRS+G  +G G+SN       S SD  SL  S+NR +++  D D+  S
Sbjct: 1   MEKREPSLVPEWLRSSGHGSGVGSSN-------SLSD--SLRNSKNRNARSRSDADSVGS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDAHDPLG 120
            FLDR+SS+N+RR SSNGS+KHAYSS  FNR +RDKDR +EKDR+++ D WD D+  P G
Sbjct: 61  PFLDRSSSTNTRRGSSNGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFG 120

Query: 121 KILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSN-------GILSGTSVGSS 180
             L  R  ++ LRRSHSM +RKQG   H   G  +   N  N       GIL GTS   S
Sbjct: 121 TFLIGR-GEEPLRRSHSMTTRKQGN--HLAQGFTVGYKNGGNINTFNGHGILPGTSPVKS 180

Query: 181 IQKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEV 240
            ++  F KDFP L  EE+ G  ++ R+SSPG S   QSL + N ALI+ GEGWTSALAEV
Sbjct: 181 SKRMGFNKDFPLLRGEERNGGPDVVRISSPGRSPTAQSLSVANPALII-GEGWTSALAEV 240

Query: 241 PSMIGSTTGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQR 300
           P++I  + G+ S      + + +GP    A  NMAEALVQAP R    PQ        Q 
Sbjct: 241 PNVIEKSGGAESHANVGNSATLSGP----ACRNMAEALVQAPGRTGTPPQ-------AQT 300

Query: 301 LEELAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELN-ATIKGGQPQPLSVHAN 360
           LE+ AI+QSRQLIPV PS PK  V +SSDKSK K   R+GE   A+ +  Q Q   +  N
Sbjct: 301 LEDRAIRQSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLGN 360

Query: 361 -QSRVG-HVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPS 420
            QS  G  +KPD  K    K ++LKP RENGV           S  NS  A SQ   APS
Sbjct: 361 MQSNPGSQIKPDTTK----KLVILKPARENGVVAGG-------SPPNSRVAASQPTTAPS 420

Query: 421 VPH-APLRSPNNTNVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMSS 480
               A +RS N       + + AS+++  G   EK+ SL+Q QSR+ F+  +K+KT  + 
Sbjct: 421 TQFTASVRSTNGPR----DLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCTNI 480

Query: 481 SAVLSDSCSSVKSPSIGQSN---ELTSSEMGTASPRVIENGAVENRNGNSSEEVQVSRDS 540
           S   S + S + S    Q+N   EL +S+   +SP+  E   +        E V+   + 
Sbjct: 481 STDPSKTSSCILSSVEEQANSSKELVASD--PSSPQAAERDEI-------MESVEKVSNV 540

Query: 541 GEKTESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSL 580
            E+     +A   D +EAAFL+SLGWDE+  ++   T EE+  + +++   KPSL
Sbjct: 541 AERISRFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREWCKKF---KPSL 544

The following BLAST results are available for this feature:

BLAST of Chy9G162820 vs.


Match Name	E-value	Identity	Description

BLAST of Chy9G162820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN63	0.0e+00	98.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1	[more]
A0A5D3DT29	0.0e+00	97.89	Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CDT9	0.0e+00	97.89	mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CC42	0.0e+00	97.40	mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo...	[more]
A0A6J1FM76	4.0e-281	88.01	uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]

BLAST of Chy9G162820 vs. NCBI nr


Match Name	Identity	Description
XP_004140377.1	98.54	mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis sativu...	[more]
XP_008460469.1	97.89	PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cuc...	[more]
XP_011655200.1	98.05	mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativu...	[more]
XP_008460470.1	97.40	PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cuc...	[more]
XP_038907227.1	91.26	mediator of RNA polymerase II transcription subunit 1 isoform X1 [Benincasa hisp...	[more]

BLAST of Chy9G162820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G36990.1	4.5e-115	50.08	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXP...	[more]
AT4G08510.1	5.0e-82	42.69	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..498
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 593..607
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 520..538
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..538
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..615
None	No IPR available	PANTHER	PTHR34112	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..614
None	No IPR available	PANTHER	PTHR34112:SF13	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..614

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy9G162820.1	Chy9G162820.1	mRNA