Chy9G161370 (gene) Cucumber (hystrix) v1

Overview
NameChy9G161370
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH09: 3700005 .. 3703638 (-)
RNA-Seq ExpressionChy9G161370
SyntenyChy9G161370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTGTAGTTGATGGTCAAAAAGGAAAGAATAAGGCTTGTTGGTTGAGAATTTACTAAGTGTTGAGAGGTTATGCTAAGGGCTTAGGCATTGTGAGGATGTCCTAGGTGAGAGCGTTGGTGCTTGACGTGGAGATTTTAGGCGTTATGGCTTGAGACTAGGCGAGATAACTCCAAAGAGGTTGTCTAGGTGATGGAGGCTAGTAGGCGGCAAGTTTTGTGTATTATCTTTTGACCGTGAGTGCAGGCTTGGCAATGAGACTTGGGCTACGTAAGGAAGCTTGTGGCCAAGGAGGTTGTAGGCAATGGGATTTGCGAGCAAGCAAGATCTAGGGGAGATGAGGTTTTGGAAGTTAGTTTTGGGCAAGAAGGTAGTCTTTGGCGAGGAGTTTGAAGGTTAGGCGATTAAGGGTGTAATTAGGCATTTGGACAGACGGTGAAGTGGTTTACAGGTGTCTTATTCATGCAAGGGGTGGTTTCATGTAAGCAGGAGGTGACAAAGTCCACTTTTCAGAAAACTCTATAAATAGGCTCACTTCGTAATTTCATTTCTCTCAATTCTCTCATGCAGATTGAGTGATTCAAGTTGGAGAAGATTTCTTTGTGAGTATATTTTCATGTTTGAGGCCTATATTTTCATGTGTGAAGCTTTCAGACAAAGTTGATTAAGGGAAGGTTTAGTTTGAAGTTCAAGAATAGTTAAAGGTCAAATTTTGAAGGATTCTAAGTATGTTGAGTTTTTGGAGGCCACATAACTCAAATCTTCGAATTTCAAGCTGAAATTTTGAAGTAAGATAGTTAACTCATTTCTAAGAAACTTTGAAGGAGGAAGTTTTGCATTTTGAGTTCTAATTTAAAAGATGAATTTTTTAAGTTGATAGTAGTTTTCTAGAAAATTTCAATGTTATGGATTGTTTTTTAAGTTGGCTAAGCATTAGGGTGGAAGGTGTTGCTCATCGCGCAAGGTAAGCTAAGAGGTTATTTTTGGACGTTAGTGTGTCATGCGAGATGACCAAACATAAAGTTAGGTGGTAAAGGGCTCGCGCGGTGCTCGGTCATGTGAGGCGAGACGCACGGTGTAACGGACATACTTGTCAAAGGTGTGTTTACCTATGGCCGTATGCTCCGAATACTCCCAATTTATCTTGTCTTTATGTCTTATACATAGTTTAGTTAGTTGCTTTCAATTTCGAGTCAATATGCTAGGGTGTGACTCCTCGGCATTTTCATATGCAAGCCTGCCAGAGCTGAAAAAGTTAAAAATGTACTATAGGGGAGGCACACCTGTTGAATCCCCGCCCAAGCCTTGTCGCACTCTTTGCAATCTATGCTTTCTTATTGCAATTGACAGTCTTCAATGCTTGTTTTAACAACGATTTTAATGAATTTATTCCTTTCTCACGTTTTCTAAAATATTTTCCCAAAAACGTGAGTGGAGGCTAAATCGTGTGTTAAAGTTGTCCGCGGCTTGCGGATTTTGATCGGCTGACTTGTTGAGAGGATAGAACAAGTGCCGCACAATCGCTCATATCGTGTCTGAAGAGTTGCGATTGTGACAAGTGGTATCAGAGCCTAATTGGCTAGTTGACAGTTTGAGACGACAAGATGTCGGTGGCGAGACCCTCTAACAAAACCCATAATGAACGGCTTGTGGAAATCGAGGAGCAGATGCTCTACCTGGTGGAAGTCCCTGATTCCATCCGATTTCTAGAAAAGCGGATTGAAGATATTGTCAAGAAAGCTGATGGCATTGAAGCGGTGTCCGGTCGTCTTGACAGATTACCCATACAAGAGTTACTAACTAGAGTTGACACTCTGGAATCCCGAGTTGTGAGAAAGGGAAACGTCACCTACGAGCGTGGTGACAGTTCGTCGGGCTCTGTCGCCCAGATGGAAGAACGAGTTATGGAGCTTGATAACTCACAAAAGAAATTGAAGGAGAACCAACTGTATGTCAAGAGGGAAAAGTGTTCCTTTGCGCAAGAGCGGATAAATTTTCTGGGCCATGTGATTGAGTGTGGCCGAATCAGTATGGAGGAGGGGAAGATTGTCGCGATCCGTGATTGGGAAGTACCAAGGTCAGTCACTTACTTGCGCTCCTTCCTCGGATTAGCCAATTATTATAGGCGGTTCGTGGAAGGATTCTCCAAAAGAGCAAGCCCGCTAACTGACTTGCAGAAGAAAGACAACAAATGGACTTGGACACCCGAATGCCAGGCCGCTTTTGACGAGTTGAAGCAAGCGATGATCAAAGGGCCGGTTTTGGGGATCGCCGATGTGACCCAACCGTTTGAAGTTGAGACCGATGCGTCTGACTACGCGTTGGGTGGTGTTCTCCTACAGAATGGACACCCCATCGCCTATGAGAGTCGAAAGCTTAATGTGGCGGAGAGGAGGTACACTGTATCGGAGAAAGAAATGCTCGCTGTGGTACACTGTTTAAGGGCCTGGAGGCAGTATTTACTGGGGTCAACTTTTGTTGTGAAGACAGACAACAGTGCTACTTGCCACTTCTTTACCCAACCAAAGTTGACCTCAAAACAAGCAAGATGGCAGGAATTCCTAGCCGAGTTTGATTTTGAGTTTGAGCATAGGAAGGGAGTGAGCAACCAGGCAGCTGATGCGCTTAGTCGAAGAGGTGAACACGCTGTTCAAGGCATGTTGGCACACCTTTACGCGAGTCAGATTGATGGTCCTATGCGCGATGTGTTGAGGGAATTCTTGCAGAAAGATTCTGCCGCTCGAAGTGTCATGAGTTTAGCTGAGGCGGGTAAGACAAGACAGTTTGGGTCGAAGATGGCCTGTTGGTGACAAAGGGAAGACGGCTGTATGTCCCTAGAGGAGGCGACCTGAGGAAGAAATTACTACACGAGTGTCACGACACTCTGTGGGCCGACCACCCCGGATGGCAGAGAACGTACGCCTTGCTGAAGAAGGGTTACTTTTGGCTCAGTATGAGAGACGATGTTATGCAATACACGAAGACATGTCTCGTCTGTCAACAAGACAAAGTCGAGAAGGCAAAGGTTGCTGGACTTCTCGAACCCCTGCCAGTTCCAACGAGACCGTGGGAGAATGTTTCTATCGACTTCATCACCCATCTCCCCAAAGTAGGCGACTATGAGACTATCTTAGTCATCATAGATCGATTCTCGAAATATGCCACTTTTGTTCCCACTACGAAGCAGTGTTCGGCAGAGTTGACTGCTCAATTGTTCTTTAAACATGTCGTGAAGCTGTGGGGTGTACCGACCAGTATTGTGAGTGATCGAGATGGTCGGTTAATTGGCACCTTTTGGACGGAGTTATTCACCTTCTTGGGGACAAGTCTGAAAGTATCCTCAAGTTACCACCCTCAGACAGACGGTCAGACCGAGCGGTTCAACTGTATGCTTGAAGAATACTTGCGCCATTTTGTCACTGCAAGGCAAAAGAATTGGGCGCAGTTACTGGATGTGGCCCAGTTCTGTTTCAATGCTCAGACGAGCTCATCAACTGGGAAGAGCCCTTTCGAGATTGTTTGCGGAAGGGAGCCGGTGTTACCACACCTTGTTGATCATCCCTATGCAGGGAAGAACCCTCAAGCTCACAACTTTACTAGGGAATGGAAGCAGACCACAGACATCGCTCG

mRNA sequence

ATGGAAGGTGTAGTTGATGGTCAAAAAGGAAAGAATAAGGCTTGGCTTAGGCATTGTGAGGATGTCCTAGGTGAGAGCGTTGGTGCTTGACGTGGAGATTTTAGGCGTTATGGCTTGAGACTAGGCGAGATAACTCCAAAGAGGTTGTCTAGGTGATGGAGGCTAGTAGGCGGCAAGTTTTGTGTATTATCTTTTGACCGTGAGTGCAGGCTTGGCAATGAGACTTGGGCTACGTAAGGAAGCTTACATCGCTCG

Coding sequence (CDS)

ATGGAAGGTGTAGTTGATGGTCAAAAAGGAAAGAATAAGGCTTGGCTTAGGCATTGTGAGGATGTCCTAGGTGAGAGCGTTGGTGCTTGACGTGGAGATTTTAGGCGTTATGGCTTGAGACTAGGCGAGATAACTCCAAAGAGGTTGTCTAGGTGATGGAGGCTAGTAGGCGGCAAGTTTTGTGTATTATCTTTTGACCGTGAGTGCAGGCTTGGCAATGAGACTTGGGCTACGTAAGGAAGCTTACATCGCTCG

Protein sequence

MEGVVDGQKGKNKAWLRHCEDVLGESVGA*RGDFRRYGLRLGEITPKRLSR*WRLVGGKFCVLSFDRECRLGNETWAT*GSLHRS
Homology
[Close]
BLAST of Chy9G161370 vs. ExPASy TrEMBL
Match: A0A0A0KLQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136880 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16
Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 1  MEGVVDGQKGKNKAWLRHCEDVLGESVGA*RGDFRRYGLRLGEITPKRLSR*WRLVGGKF 60
          ME VVDGQKGKNKAWL HCEDVL E VGA RGD RR+GLR  EI PKRLSR W+LV   F
Sbjct: 1  MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF 60

[Close]
BLAST of Chy9G161370 vs. NCBI nr
Match: KGN49804.1 (hypothetical protein Csa_004674 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 5.05e-24
Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 1  MEGVVDGQKGKNKAWLRHCEDVLGESVGA*RGDFRRYGLRLGEITPKRLSR*WRLVGGKF 60
          ME VVDGQKGKNKAWL HCEDVL E VGA RGD RR+GLR  EI PKRLSR W+LV   F
Sbjct: 1  MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF 60

The following BLAST results are available for this feature:
BLAST of Chy9G161370 vs.
Match NameE-valueIdentityDescription
BLAST of Chy9G161370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLQ51.5e-1675.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136880 PE=4 SV=1[more]
BLAST of Chy9G161370 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49804.15.05e-2475.00hypothetical protein Csa_004674 [Cucumis sativus][more]
BLAST of Chy9G161370 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy9G161370.1Chy9G161370.1mRNA