Chy8G154640 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G154640
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transcription factor, TCP
Location	chrH08: 16046613 .. 16047492 (-)
RNA-Seq Expression	Chy8G154640
Synteny	Chy8G154640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCCCACTCCGTTCCGTGGGGAGGGAGACTGTGTTATGTATGTGTGTGCGCACTTCTTTTTCATTCCATTTTTTTCATTTTTAAATTTGTTACTTCCTCATCGGTTTCTCCCTCTGTTCATTCCTCAGCAGTCAGCTCTCAGCTCTCTTCTCAAACCCTAAAATCCTCCTCCGATTAAAACCCTCGAAACTACCTTCTCTTCTCCCCTTTCACTCCTTCCTCTTCTCAATCCAAAGCACAGTTGTTTCAACTATGGGATCCGACATCGTTCTACACAAATTCCCCTCTTCTTCCGACCCCCATTCTCAGCCCCCAACCGCTTCTCACTCTGTCGTCGGCAGTAACTCCTCTCCGGTCACCATCACGCGCCAATCCCTCCTCCCTCGCAAGTCAAATACCCCCTTATCCTCCTCTTCTTCCAAGGATCGCCACATCAAGGTCAACGGAAGAGGGCGGCGCGTCCGTATGCCCGCCCTCTGTGCTGCCCGCATCTTTCAGTTAACGCGTGAGCTCGGTCATCGTTCCGAGGGTGAAACCATCGAGTGGCTTCTCCGTCAGGCTGAACCTTCCATCATTGCCGCCACGGGTACTGGTACAGTTCCTTCTGGTCCGATCTCCACTGTCTCCTCTGCTATGGCTTCTTCCGGTCGGTCTGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCAGTGGGCAGGGGATGTTCGCTATGCCACCGCCTAGTTGCCGTCTGGATTTATGCCAGCCGGTGGGGATGGAGTACTCTGCTGCTGGGAATGATTACCGCCACATGCCGTTCACAGCGCTGTTGTTGCAGCCGTCGACGGCAGAGGAGACGGAGGAGAGACAGGAGGAGGAGGTTTTTAGAGAATAA

mRNA sequence

ATGCATCCCACTCCGTTCCGTGGGGAGGGAGACTGTGTTATCAGTCAGCTCTCAGCTCTCTTCTCAAACCCTAAAATCCTCCTCCGATTAAAACCCTCGAAACTACCTTCTCTTCTCCCCTTTCACTCCTTCCTCTTCTCAATCCAAAGCACAGTTGTTTCAACTATGGGATCCGACATCGTTCTACACAAATTCCCCTCTTCTTCCGACCCCCATTCTCAGCCCCCAACCGCTTCTCACTCTGTCGTCGGCAGTAACTCCTCTCCGGTCACCATCACGCGCCAATCCCTCCTCCCTCGCAAGTCAAATACCCCCTTATCCTCCTCTTCTTCCAAGGATCGCCACATCAAGGTCAACGGAAGAGGGCGGCGCGTCCGTATGCCCGCCCTCTGTGCTGCCCGCATCTTTCAGTTAACGCGTGAGCTCGGTCATCGTTCCGAGGGTGAAACCATCGAGTGGCTTCTCCGTCAGGCTGAACCTTCCATCATTGCCGCCACGGGTACTGGTACAGTTCCTTCTGGTCCGATCTCCACTGTCTCCTCTGCTATGGCTTCTTCCGGTCGGTCTGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCAGTGGGCAGGGGATGTTCGCTATGCCACCGCCTAGTTGCCGTCTGGATTTATGCCAGCCGGTGGGGATGGAGTACTCTGCTGCTGGGAATGATTACCGCCACATGCCGTTCACAGCGCTGTTGTTGCAGCCGTCGACGGCAGAGGAGACGGAGGAGAGACAGGAGGAGGAGGTTTTTAGAGAATAA

Coding sequence (CDS)

ATGCATCCCACTCCGTTCCGTGGGGAGGGAGACTGTGTTATCAGTCAGCTCTCAGCTCTCTTCTCAAACCCTAAAATCCTCCTCCGATTAAAACCCTCGAAACTACCTTCTCTTCTCCCCTTTCACTCCTTCCTCTTCTCAATCCAAAGCACAGTTGTTTCAACTATGGGATCCGACATCGTTCTACACAAATTCCCCTCTTCTTCCGACCCCCATTCTCAGCCCCCAACCGCTTCTCACTCTGTCGTCGGCAGTAACTCCTCTCCGGTCACCATCACGCGCCAATCCCTCCTCCCTCGCAAGTCAAATACCCCCTTATCCTCCTCTTCTTCCAAGGATCGCCACATCAAGGTCAACGGAAGAGGGCGGCGCGTCCGTATGCCCGCCCTCTGTGCTGCCCGCATCTTTCAGTTAACGCGTGAGCTCGGTCATCGTTCCGAGGGTGAAACCATCGAGTGGCTTCTCCGTCAGGCTGAACCTTCCATCATTGCCGCCACGGGTACTGGTACAGTTCCTTCTGGTCCGATCTCCACTGTCTCCTCTGCTATGGCTTCTTCCGGTCGGTCTGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCAGTGGGCAGGGGATGTTCGCTATGCCACCGCCTAGTTGCCGTCTGGATTTATGCCAGCCGGTGGGGATGGAGTACTCTGCTGCTGGGAATGATTACCGCCACATGCCGTTCACAGCGCTGTTGTTGCAGCCGTCGACGGCAGAGGAGACGGAGGAGAGACAGGAGGAGGAGGTTTTTAGAGAATAA

Protein sequence

MHPTPFRGEGDCVISQLSALFSNPKILLRLKPSKLPSLLPFHSFLFSIQSTVVSTMGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRHIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPSTAEETEERQEEEVFRE*

Homology

[Close]

BLAST of Chy8G154640 vs. ExPASy Swiss-Prot
Match: Q9SJK7 (Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.2e-35
Identity = 90/153 (58.82%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 108 SSSSKDRHIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATG 167
           S+ +KDRH KVNGR RRV MPAL AARIFQLTRELGH++EGETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 168 TGTVPSGPISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYS 227
            GT     IS      A    S S    P T   + Q       PSCRLDLCQP+G++Y 
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQTQTPQS------PSCRLDLCQPIGIQYP 159

Query: 228 AAGNDYRHMPFTALLLQP--STAEETEERQEEE 259
              N Y HMPFTA+LL+P  +TAE   E  EEE
Sbjct: 160 V--NGYSHMPFTAMLLEPMTTTAESEVEIAEEE 181

[Close]

BLAST of Chy8G154640 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 66  PSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRHIKVNGRGRRV 125
           P S    SQP T    ++ +         +S +      PL  +S+KDRH KV+GRGRR+
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQ-------EESAVVAAKKPPLKRASTKDRHTKVDGRGRRI 138

Query: 126 RMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMAS 185
           RMPALCAAR+FQLTRELGH+S+GETIEWLL+QAEPS+IAATGTGT+P+   ++++ ++ S
Sbjct: 139 RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPAN-FTSLNISLRS 196

Query: 186 SGRSVS 192
           SG S+S
Sbjct: 199 SGSSMS 196

[Close]

BLAST of Chy8G154640 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.2e-27
Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 50  STVVSTMGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSS 109
           +  V+T G    L     S  P S PP  S     S+++  T T++              
Sbjct: 13  TAAVATGGGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKR-------------- 72

Query: 110 SSKDRHIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTG 169
           S+KDRH KV+GRGRR+RMPALCAAR+FQLTRELGH+S+GETIEWLL+QAEP+I+AATGTG
Sbjct: 73  STKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTG 132

Query: 170 TVPSGPISTVSSAMASSGRSVS 192
           T+P+   ST+S ++ SSG ++S
Sbjct: 133 TIPAN-FSTLSVSLRSSGSTLS 139

[Close]

BLAST of Chy8G154640 vs. ExPASy Swiss-Prot
Match: Q9LQF0 (Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.0e-26
Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 77  TASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRHIKVNGRGRRVRMPALCAARIF 136
           + S +    NS+  T+T        + TP +   SKDRHIKV+GRGRR+RMPA+CAAR+F
Sbjct: 29  SVSLTTTAPNSTTTTVT-------AAKTP-AKRPSKDRHIKVDGRGRRIRMPAICAARVF 88

Query: 137 QLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVS 192
           QLTREL H+S+GETIEWLL+QAEP+IIAATGTGT+P+  IST++ ++ SSG ++S
Sbjct: 89  QLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIPAN-ISTLNISLRSSGSTLS 134

[Close]

BLAST of Chy8G154640 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.2e-25
Identity = 58/78 (74.36%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 109 SSSKDRHIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGT 168
           SS+KDRH KV GRGRR+RMPALCAARIFQLTRELGH+S+GETI+WLL+QAEPSIIAATG+
Sbjct: 76  SSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGS 135

Query: 169 GTVPSGPISTVSSAMASS 187
           GT+P+   S ++S+ A+S
Sbjct: 136 GTIPA---SALASSAATS 150

[Close]

BLAST of Chy8G154640 vs. ExPASy TrEMBL
Match: A0A1S3CGZ3 (uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.2e-122
Identity = 233/247 (94.33%), Postives = 237/247 (95.95%), Query Frame = 0


Query: 16  QLSALFSNPKILLRLKPSKLPSLLPFHSFLFSIQSTVVSTMGSDIVLHKFPSSSDPHSQP 75
           QLSAL SNPKI LR KPSKLPSLLPFHSFL    +TVVSTMGSDIVLHKFPSSSDPHSQP
Sbjct: 80  QLSALISNPKIFLRSKPSKLPSLLPFHSFL----NTVVSTMGSDIVLHKFPSSSDPHSQP 139

Query: 76  PTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRHIKVNGRGRRVRMPALCAARI 135
           PTASHSVVGSNSSP TI+RQSLLPRKSNT LSSSSSKDRHIKVNGRGRRVRMPALCAARI
Sbjct: 140 PTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRHIKVNGRGRRVRMPALCAARI 199

Query: 136 FQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVSCRVQ 195
           FQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVSCR+Q
Sbjct: 200 FQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVSCRIQ 259

Query: 196 PVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPSTAEETEERQ 255
           PVTVGGSGQGMF+MPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPST EETEERQ
Sbjct: 260 PVTVGGSGQGMFSMPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPSTGEETEERQ 319

Query: 256 EEEVFRE 263
           EEEVFRE
Sbjct: 320 EEEVFRE 322

[Close]

BLAST of Chy8G154640 vs. ExPASy TrEMBL
Match: A0A0A0KH86 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.9e-107
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 115
           MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 60

Query: 116 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 175
           IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 176 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 235
           ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 236 MPFTALLLQPSTAEETEERQEEEVF 261
           MPFTALLLQPSTAEETEERQEEE+F
Sbjct: 181 MPFTALLLQPSTAEETEERQEEELF 205

[Close]

BLAST of Chy8G154640 vs. ExPASy TrEMBL
Match: A0A5D3C791 (Transcription factor TCP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00190 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.3e-105
Identity = 199/207 (96.14%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 115
           MGSDIVLH FPSSSDPHSQPPTASHSVVGSNSSP TI+RQSLLPRKSNT LSSSSSKDRH
Sbjct: 1   MGSDIVLHNFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 60

Query: 116 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 175
           IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 176 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 235
           ISTVSSAMASSGRSVSCR+QPVTVGGSGQGMF++PPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSLPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 236 MPFTALLLQPSTAEETEERQEEEVFRE 263
           MPFTALLLQPST EETEERQEEEVFRE
Sbjct: 181 MPFTALLLQPSTGEETEERQEEEVFRE 207

[Close]

BLAST of Chy8G154640 vs. ExPASy TrEMBL
Match: A0A6J1EK07 (transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.2e-87
Identity = 172/208 (82.69%), Postives = 185/208 (88.94%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPL-SSSSSKDR 115
           MGS+I LHKFPSSSD HSQP  ASHSVV SN+SP  +T+QS++PRKS   L SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 116 HIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSG 175
           H KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ 
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 176 PISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYR 235
           PIST+S AMASS  SVSCRVQ V V    QGMFAMPPPSCRLDLCQPVG++YSAAGNDYR
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 236 HMPFTALLLQPSTAEETEERQEEEVFRE 263
           HMPFTALLLQPSTA+E EERQEEEVFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Chy8G154640 vs. ExPASy TrEMBL
Match: A0A6J1IR93 (transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.8e-82
Identity = 167/208 (80.29%), Postives = 181/208 (87.02%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPL-SSSSSKDR 115
           MGS+I LHKFPSSSD HSQ   ASHSVV +NSSP  +T+QS++PRKS   L SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQSTAASHSVVRNNSSPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 116 HIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSG 175
           H KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ 
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 176 PISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYR 235
           PIST++ AMASS  SVSCRVQ V V    QGMFAM  PSCRLDLCQPVG++YSAAGNDYR
Sbjct: 121 PISTITPAMASSAPSVSCRVQSVGVAADEQGMFAM--PSCRLDLCQPVGLDYSAAGNDYR 180

Query: 236 HMPFTALLLQPSTAEETEERQEEEVFRE 263
           HMPFTALLLQPSTA+E EERQE EVFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEGEVFRE 206

[Close]

BLAST of Chy8G154640 vs. NCBI nr
Match: XP_008462463.1 (PREDICTED: uncharacterized protein LOC103500811 [Cucumis melo])

HSP 1 Score: 440 bits (1132), Expect = 1.84e-153
Identity = 233/247 (94.33%), Postives = 237/247 (95.95%), Query Frame = 0


Query: 16  QLSALFSNPKILLRLKPSKLPSLLPFHSFLFSIQSTVVSTMGSDIVLHKFPSSSDPHSQP 75
           QLSAL SNPKI LR KPSKLPSLLPFHSFL    +TVVSTMGSDIVLHKFPSSSDPHSQP
Sbjct: 80  QLSALISNPKIFLRSKPSKLPSLLPFHSFL----NTVVSTMGSDIVLHKFPSSSDPHSQP 139

Query: 76  PTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRHIKVNGRGRRVRMPALCAARI 135
           PTASHSVVGSNSSP TI+RQSLLPRKSNT LSSSSSKDRHIKVNGRGRRVRMPALCAARI
Sbjct: 140 PTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRHIKVNGRGRRVRMPALCAARI 199

Query: 136 FQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVSCRVQ 195
           FQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVSCR+Q
Sbjct: 200 FQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVSCRIQ 259

Query: 196 PVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPSTAEETEERQ 255
           PVTVGGSGQGMF+MPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPST EETEERQ
Sbjct: 260 PVTVGGSGQGMFSMPPPSCRLDLCQPVGMEYSAAGNDYRHMPFTALLLQPSTGEETEERQ 319

Query: 256 EEEVFRE 262
           EEEVFRE
Sbjct: 320 EEEVFRE 322

[Close]

BLAST of Chy8G154640 vs. NCBI nr
Match: XP_004143267.1 (transcription factor TCP11 [Cucumis sativus] >KAE8647403.1 hypothetical protein Csa_003031 [Cucumis sativus])

HSP 1 Score: 397 bits (1020), Expect = 3.44e-138
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 115
           MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 60

Query: 116 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 175
           IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 176 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 235
           ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 236 MPFTALLLQPSTAEETEERQEEEVFRE 262
           MPFTALLLQPSTAEETEERQEEEVFRE
Sbjct: 181 MPFTALLLQPSTAEETEERQEEEVFRE 207

[Close]

BLAST of Chy8G154640 vs. NCBI nr
Match: TYK07305.1 (transcription factor TCP11-like [Cucumis melo var. makuwa])

HSP 1 Score: 385 bits (988), Expect = 2.58e-133
Identity = 199/207 (96.14%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 115
           MGSDIVLH FPSSSDPHSQPPTASHSVVGSNSSP TI+RQSLLPRKSNT LSSSSSKDRH
Sbjct: 1   MGSDIVLHNFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 60

Query: 116 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 175
           IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 176 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 235
           ISTVSSAMASSGRSVSCR+QPVTVGGSGQGMF++PPPSCRLDLCQPVGMEYSAAGNDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSLPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 236 MPFTALLLQPSTAEETEERQEEEVFRE 262
           MPFTALLLQPST EETEERQEEEVFRE
Sbjct: 181 MPFTALLLQPSTGEETEERQEEEVFRE 207

[Close]

BLAST of Chy8G154640 vs. NCBI nr
Match: XP_038882900.1 (transcription factor TCP11 [Benincasa hispida])

HSP 1 Score: 333 bits (854), Expect = 5.67e-113
Identity = 177/207 (85.51%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 115
           MGS+IVLHKFPS+SD +SQP TASHSVVGSNSS   IT Q+++PRKS T L   SS+DRH
Sbjct: 1   MGSEIVLHKFPSTSDHNSQP-TASHSVVGSNSSLANITPQAVVPRKSTTSL---SSRDRH 60

Query: 116 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 175
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120

Query: 176 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 235
           IST+S AMASS RS+SCRVQP+TVGG GQGMFAMPPPSCRLDLCQPVGMEYSA GNDYRH
Sbjct: 121 ISTLSPAMASSARSISCRVQPLTVGGGGQGMFAMPPPSCRLDLCQPVGMEYSAVGNDYRH 180

Query: 236 MPFTALLLQPSTAEETEERQEEEVFRE 262
           MPFTALLLQPSTAEE EERQEEEVFRE
Sbjct: 181 MPFTALLLQPSTAEEAEERQEEEVFRE 203

[Close]

BLAST of Chy8G154640 vs. NCBI nr
Match: XP_023543697.1 (transcription factor TCP11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328 bits (842), Expect = 4.53e-111
Identity = 173/208 (83.17%), Postives = 186/208 (89.42%), Query Frame = 0


Query: 56  MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSS-KDR 115
           MGS+I LHKFPSSSD HSQP  ASHSVV SN+SP  +T+QS++PRKS   LSSSSS +DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 116 HIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSG 175
           H KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ 
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 176 PISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYR 235
           PIST+S AMASSG SVSCRVQ V V    QGMFAMPPPSCRLDLCQPVG++YSAAGNDYR
Sbjct: 121 PISTISPAMASSGPSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 236 HMPFTALLLQPSTAEETEERQEEEVFRE 262
           HMPFTALLLQPSTA+E EERQEEEVFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Chy8G154640 vs. TAIR 10
Match: AT2G37000.1 (TCP family transcription factor )

HSP 1 Score: 149.1 bits (375), Expect = 5.1e-36
Identity = 90/153 (58.82%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 108 SSSSKDRHIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATG 167
           S+ +KDRH KVNGR RRV MPAL AARIFQLTRELGH++EGETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 168 TGTVPSGPISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYS 227
            GT     IS      A    S S    P T   + Q       PSCRLDLCQP+G++Y 
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQTQTPQS------PSCRLDLCQPIGIQYP 159

Query: 228 AAGNDYRHMPFTALLLQP--STAEETEERQEEE 259
              N Y HMPFTA+LL+P  +TAE   E  EEE
Sbjct: 160 V--NGYSHMPFTAMLLEPMTTTAESEVEIAEEE 181

[Close]

BLAST of Chy8G154640 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 66  PSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRHIKVNGRGRRV 125
           P S    SQP T    ++ +         +S +      PL  +S+KDRH KV+GRGRR+
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQ-------EESAVVAAKKPPLKRASTKDRHTKVDGRGRRI 138

Query: 126 RMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMAS 185
           RMPALCAAR+FQLTRELGH+S+GETIEWLL+QAEPS+IAATGTGT+P+   ++++ ++ S
Sbjct: 139 RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPAN-FTSLNISLRS 196

Query: 186 SGRSVS 192
           SG S+S
Sbjct: 199 SGSSMS 196

[Close]

BLAST of Chy8G154640 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-28
Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = 0


Query: 50  STVVSTMGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSS 109
           +  V+T G    L     S  P S PP  S     S+++  T T++              
Sbjct: 13  TAAVATGGGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKR-------------- 72

Query: 110 SSKDRHIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTG 169
           S+KDRH KV+GRGRR+RMPALCAAR+FQLTRELGH+S+GETIEWLL+QAEP+I+AATGTG
Sbjct: 73  STKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTG 132

Query: 170 TVPSGPISTVSSAMASSGRSVS 192
           T+P+   ST+S ++ SSG ++S
Sbjct: 133 TIPAN-FSTLSVSLRSSGSTLS 139

[Close]

BLAST of Chy8G154640 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 119.0 bits (297), Expect = 5.7e-27
Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 77  TASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRHIKVNGRGRRVRMPALCAARIF 136
           + S +    NS+  T+T        + TP +   SKDRHIKV+GRGRR+RMPA+CAAR+F
Sbjct: 29  SVSLTTTAPNSTTTTVT-------AAKTP-AKRPSKDRHIKVDGRGRRIRMPAICAARVF 88

Query: 137 QLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGPISTVSSAMASSGRSVS 192
           QLTREL H+S+GETIEWLL+QAEP+IIAATGTGT+P+  IST++ ++ SSG ++S
Sbjct: 89  QLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIPAN-ISTLNISLRSSGSTLS 134

[Close]

BLAST of Chy8G154640 vs. TAIR 10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 116.3 bits (290), Expect = 3.7e-26
Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 99  PRKSNTPLSSSSSKDRHIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQA 158
           P  +  PL  +S+KDRH KV GRGRR+RMPA CAARIFQLTRELGH+S+GETI WLL  A
Sbjct: 63  PSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENA 122

Query: 159 EPSIIAATGTGTVPS 174
           EP+IIAATGTGTVP+
Sbjct: 123 EPAIIAATGTGTVPA 137

The following BLAST results are available for this feature:

BLAST of Chy8G154640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJK7	7.2e-35	58.82	Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1	[more]
Q93Z00	1.9e-27	53.17	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C518	7.2e-27	50.70	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q9LQF0	8.0e-26	57.39	Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1	[more]
Q9LSD5	5.2e-25	74.36	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]

BLAST of Chy8G154640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGZ3	6.2e-122	94.33	uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=...	[more]
A0A0A0KH86	1.9e-107	99.51	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV...	[more]
A0A5D3C791	5.3e-105	96.14	Transcription factor TCP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1EK07	2.2e-87	82.69	transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE...	[more]
A0A6J1IR93	2.8e-82	80.29	transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4...	[more]

BLAST of Chy8G154640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462463.1	1.84e-153	94.33	PREDICTED: uncharacterized protein LOC103500811 [Cucumis melo]	[more]
XP_004143267.1	3.44e-138	100.00	transcription factor TCP11 [Cucumis sativus] >KAE8647403.1 hypothetical protein ...	[more]
TYK07305.1	2.58e-133	96.14	transcription factor TCP11-like [Cucumis melo var. makuwa]	[more]
XP_038882900.1	5.67e-113	85.51	transcription factor TCP11 [Benincasa hispida]	[more]
XP_023543697.1	4.53e-111	83.17	transcription factor TCP11-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy8G154640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37000.1	5.1e-36	58.82	TCP family transcription factor	[more]
AT3G47620.1	1.4e-28	53.17	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G58100.1	5.1e-28	50.70	TCP family transcription factor	[more]
AT1G35560.1	5.7e-27	57.39	TCP family transcription factor	[more]
AT2G45680.1	3.7e-26	73.33	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 110..209 e-value: 1.3E-28 score: 100.5
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 111..165 score: 26.536804
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..113
None	No IPR available	PANTHER	PTHR31072:SF4	TRANSCRIPTION FACTOR TCP16-RELATED	coord: 94..191
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 94..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G154640.1	Chy8G154640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity