Chy8G154230 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATCGTCAACTTTATGACAACTATGGTCTTCCTCTATCTCCTTGCTGCTACCCCTTCGATGTCTTCTTCTGAAGGTATTATTCATGCATGATGATATTTTTAAATTAGAATGAGTTATAATATAGTTTGAATTTGAAATTGAATTTTGTTGTTGTGTAGGTGGATCATCTGAAAGCAATAATGGTGGGATAGATGATGTTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCATCTCATCATATATCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATTATTCATCATCATCATCATCATCAACTTCTTCAACCCAAACAACCTGATTCTCTCAATAATCCTATTCCTCATCCATAA ATGGAGATCGTCAACTTTATGACAACTATGGTCTTCCTCTATCTCCTTGCTGCTACCCCTTCGATGTCTTCTTCTGAAGGTGGATCATCTGAAAGCAATAATGGTGGGATAGATGATGTTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCATCTCATCATATATCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATTATTCATCATCATCATCATCATCAACTTCTTCAACCCAAACAACCTGATTCTCTCAATAATCCTATTCCTCATCCATAA ATGGAGATCGTCAACTTTATGACAACTATGGTCTTCCTCTATCTCCTTGCTGCTACCCCTTCGATGTCTTCTTCTGAAGGTGGATCATCTGAAAGCAATAATGGTGGGATAGATGATGTTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCATCTCATCATATATCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATTATTCATCATCATCATCATCATCAACTTCTTCAACCCAAACAACCTGATTCTCTCAATAATCCTATTCCTCATCCATAA MEIVNFMTTMVFLYLLAATPSMSSSEGGSSESNNGGIDDVVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHHHHQLLQPKQPDSLNNPIPHP* Homology
BLAST of Chy8G154230 vs. ExPASy TrEMBL
Match: A0A0A0KIB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444970 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36 Identity = 80/95 (84.21%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Chy8G154230 vs. ExPASy TrEMBL
Match: A0A5A7U1B9 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00720 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.7e-32 Identity = 80/104 (76.92%), Postives = 83/104 (79.81%), Query Frame = 0
BLAST of Chy8G154230 vs. ExPASy TrEMBL
Match: A0A6J1IQ06 (uncharacterized protein LOC111478885 OS=Cucurbita maxima OX=3661 GN=LOC111478885 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11 Identity = 50/76 (65.79%), Postives = 56/76 (73.68%), Query Frame = 0
BLAST of Chy8G154230 vs. ExPASy TrEMBL
Match: A0A6J1CPX6 (uncharacterized protein LOC111013652 OS=Momordica charantia OX=3673 GN=LOC111013652 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11 Identity = 48/83 (57.83%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Chy8G154230 vs. ExPASy TrEMBL
Match: A0A6J1EDR4 (uncharacterized protein LOC111433241 OS=Cucurbita moschata OX=3662 GN=LOC111433241 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.1e-11 Identity = 47/75 (62.67%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of Chy8G154230 vs. NCBI nr
Match: KGN48132.1 (hypothetical protein Csa_003970 [Cucumis sativus]) HSP 1 Score: 162 bits (409), Expect = 1.25e-49 Identity = 80/95 (84.21%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Chy8G154230 vs. NCBI nr
Match: KAA0047279.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 148 bits (373), Expect = 5.22e-44 Identity = 80/104 (76.92%), Postives = 83/104 (79.81%), Query Frame = 0
BLAST of Chy8G154230 vs. NCBI nr
Match: XP_038881428.1 (uncharacterized protein LOC120072958 [Benincasa hispida]) HSP 1 Score: 92.4 bits (228), Expect = 5.87e-22 Identity = 61/100 (61.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of Chy8G154230 vs. NCBI nr
Match: XP_022143835.1 (uncharacterized protein LOC111013652 [Momordica charantia]) HSP 1 Score: 79.7 bits (195), Expect = 5.10e-17 Identity = 46/66 (69.70%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Chy8G154230 vs. NCBI nr
Match: XP_022979166.1 (uncharacterized protein LOC111478885 [Cucurbita maxima]) HSP 1 Score: 79.3 bits (194), Expect = 6.00e-17 Identity = 50/75 (66.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of Chy8G154230 vs. TAIR 10
Match: AT5G03120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.0e-05 Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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