Chy8G153770 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G153770
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Serine-rich adhesin for platelets like
Location	chrH08: 15409976 .. 15410332 (-)
RNA-Seq Expression	Chy8G153770
Synteny	Chy8G153770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCGCTTTCTCTACCGCCGTCTCCGATCCCGGTGGCCGCTCCTCGTCTTCTCCGCCTCCTGGACCCTTCTTTTGACGCTCACCGTCGCCGCTGCCTCCTTCGCTCCCGAGCTCGCCTTCGCCTCCGCTATTTCTCCTTCCTCCTCTTTTGCTGCCGAGTGCAAGTCCGATGGTTTGGTTAGGGTTCCGATGGATATCCCGGGAGATGTTCTTTGCGTTCCGGATCGCTTGTTTAGAAAATCGGGAATTGATTTGATTGTCCCTCCTATTTTTGCCGCGGTTGTAGTGGCTGGTTCTGCTTGCTTTGTTAGGGCTTTGGGCCTATGGGCCGACGACGACGACGATTCCCTTTAA

mRNA sequence

ATGCTCCGCTTTCTCTACCGCCGTCTCCGATCCCGGTGGCCGCTCCTCGTCTTCTCCGCCTCCTGGACCCTTCTTTTGACGCTCACCGTCGCCGCTGCCTCCTTCGCTCCCGAGCTCGCCTTCGCCTCCGCTATTTCTCCTTCCTCCTCTTTTGCTGCCGAGTGCAAGTCCGATGGTTTGGTTAGGGTTCCGATGGATATCCCGGGAGATGTTCTTTGCGTTCCGGATCGCTTGTTTAGAAAATCGGGAATTGATTTGATTGTCCCTCCTATTTTTGCCGCGGTTGTAGTGGCTGGTTCTGCTTGCTTTGTTAGGGCTTTGGGCCTATGGGCCGACGACGACGACGATTCCCTTTAA

Coding sequence (CDS)

ATGCTCCGCTTTCTCTACCGCCGTCTCCGATCCCGGTGGCCGCTCCTCGTCTTCTCCGCCTCCTGGACCCTTCTTTTGACGCTCACCGTCGCCGCTGCCTCCTTCGCTCCCGAGCTCGCCTTCGCCTCCGCTATTTCTCCTTCCTCCTCTTTTGCTGCCGAGTGCAAGTCCGATGGTTTGGTTAGGGTTCCGATGGATATCCCGGGAGATGTTCTTTGCGTTCCGGATCGCTTGTTTAGAAAATCGGGAATTGATTTGATTGTCCCTCCTATTTTTGCCGCGGTTGTAGTGGCTGGTTCTGCTTGCTTTGTTAGGGCTTTGGGCCTATGGGCCGACGACGACGACGATTCCCTTTAA

Protein sequence

MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDDSL*

Homology

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BLAST of Chy8G153770 vs. ExPASy TrEMBL
Match: A0A0A0L0V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294400 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDDSL 119
           VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDD+L
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDDAL 118

[Close]

BLAST of Chy8G153770 vs. ExPASy TrEMBL
Match: A0A5A7STU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00020 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDDSL 119
           VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADD+DD+L
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDNDDAL 118

[Close]

BLAST of Chy8G153770 vs. ExPASy TrEMBL
Match: A0A6J1HJX3 (uncharacterized protein LOC111463600 OS=Cucurbita moschata OX=3662 GN=LOC111463600 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.2e-49
Identity = 103/114 (90.35%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G 
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
           VRVPMD PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD
Sbjct: 61  VRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114

[Close]

BLAST of Chy8G153770 vs. ExPASy TrEMBL
Match: A0A6J1IAZ3 (uncharacterized protein LOC111471253 OS=Cucurbita maxima OX=3661 GN=LOC111471253 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48
Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G 
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
           VRVPM+ PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD
Sbjct: 61  VRVPMNFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114

[Close]

BLAST of Chy8G153770 vs. ExPASy TrEMBL
Match: A0A6J1CRS0 (uncharacterized protein LOC111013670 OS=Momordica charantia OX=3673 GN=LOC111013670 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.3e-46
Identity = 102/120 (85.00%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKS--- 60
           MLRFL+RRLRSRWPLLV+SASWT+LLTLTVA ASFAPELAFASAISPSSSFAA+CK+   
Sbjct: 1   MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVG 60

Query: 61  ---DGLVRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
               GLVRVPMD+PGDVLCVPD LFRKS IDLIVPPIFAAVVVAGSAC VRA GLWADDD
Sbjct: 61  GGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAAVVVAGSACVVRAFGLWADDD 120

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BLAST of Chy8G153770 vs. NCBI nr
Match: XP_004142209.1 (uncharacterized protein LOC101207834 [Cucumis sativus] >KGN54232.1 hypothetical protein Csa_018146 [Cucumis sativus])

HSP 1 Score: 227 bits (579), Expect = 8.29e-75
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDDSL 118
           VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDD+L
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDDAL 118

[Close]

BLAST of Chy8G153770 vs. NCBI nr
Match: KAA0032619.1 (uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa] >TYK23500.1 uncharacterized protein E5676_scaffold500G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 225 bits (574), Expect = 4.80e-74
Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDDDSL 118
           VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADD+DD+L
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDNDDAL 118

[Close]

BLAST of Chy8G153770 vs. NCBI nr
Match: XP_038883336.1 (uncharacterized protein LOC120074319 [Benincasa hispida])

HSP 1 Score: 214 bits (544), Expect = 1.69e-69
Identity = 109/114 (95.61%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLRFLYRRL+SRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSF A CKSDGL
Sbjct: 1   MLRFLYRRLKSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFTAHCKSDGL 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114
           VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114

[Close]

BLAST of Chy8G153770 vs. NCBI nr
Match: XP_022963374.1 (uncharacterized protein LOC111463600 [Cucurbita moschata] >XP_023517164.1 uncharacterized protein LOC111781002 [Cucurbita pepo subsp. pepo] >KAG6595307.1 hypothetical protein SDJN03_11860, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027317.1 hypothetical protein SDJN02_11329, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202 bits (515), Expect = 4.48e-65
Identity = 103/114 (90.35%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G 
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114
           VRVPMD PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD
Sbjct: 61  VRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114

[Close]

BLAST of Chy8G153770 vs. NCBI nr
Match: XP_022972738.1 (uncharacterized protein LOC111471253 [Cucurbita maxima])

HSP 1 Score: 201 bits (510), Expect = 2.59e-64
Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60
           MLR LYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSFA+ CK+ G 
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114
           VRVPM+ PGDV+CVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD
Sbjct: 61  VRVPMNFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114

[Close]

BLAST of Chy8G153770 vs. TAIR 10
Match: AT2G37530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSS--FAAECKSD 60
           M   L  R   R P  V+ A+WTL LTLTVA  S APE AF SAI PSSS  F+  C S 
Sbjct: 5   MFSSLTHRFAWRIPHFVYGATWTLFLTLTVAIISLAPEFAFVSAIFPSSSEVFSRRCGSY 64

Query: 61  GLVRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
             + VP+D+P +VLC+P  LFR+S +DL+VPP+FAA+VVA SA  VR +GLW  D+
Sbjct: 65  AAILVPLDLPSEVLCLPANLFRRSKMDLVVPPVFAAIVVALSAVVVRTMGLWEADE 120

[Close]

BLAST of Chy8G153770 vs. TAIR 10
Match: AT1G07795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits to 38 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 7   RRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVPMD 66
           R +  RWP++  +A+WT+LL  TVA ASFAPE+AF S +S S         DG V++PMD
Sbjct: 14  RSVSDRWPVIAQAATWTVLLMFTVAVASFAPEMAFVSTVSSSCG-----GGDGFVKIPMD 73

Query: 67  IPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRA 107
             G+ +CVP  + ++S  DL VP IFAAV+V  SAC +R+
Sbjct: 74  FAGESICVPSNMVKRSRFDLFVPSIFAAVMVTASACLIRS 108

[Close]

BLAST of Chy8G153770 vs. TAIR 10
Match: AT2G28725.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 3.1e-17
Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 5   LYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGLVRVP 64
           +  +  +RW +LV +A+WT+LL +TVA ASFAPE+AF S +  S        SDG VR+P
Sbjct: 4   ILEKTSTRWEVLVQTATWTILLMITVALASFAPEMAFVSKLKSS--------SDGFVRIP 63

Query: 65  MDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRA 107
           MD+PG++L +P  + + S +D+ +P IFA V+V  S   +R+
Sbjct: 64  MDLPGEMLILPSEMVKNSYLDVFLPTIFAGVMVIASVSLLRS 97

The following BLAST results are available for this feature:

BLAST of Chy8G153770 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G153770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0V5	3.5e-56	99.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294400 PE=4 SV=1	[more]
A0A5A7STU5	1.3e-55	98.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HJX3	9.2e-49	90.35	uncharacterized protein LOC111463600 OS=Cucurbita moschata OX=3662 GN=LOC1114636...	[more]
A0A6J1IAZ3	3.5e-48	89.47	uncharacterized protein LOC111471253 OS=Cucurbita maxima OX=3661 GN=LOC111471253...	[more]
A0A6J1CRS0	7.3e-46	85.00	uncharacterized protein LOC111013670 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Chy8G153770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142209.1	8.29e-75	99.15	uncharacterized protein LOC101207834 [Cucumis sativus] >KGN54232.1 hypothetical ...	[more]
KAA0032619.1	4.80e-74	98.31	uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_038883336.1	1.69e-69	95.61	uncharacterized protein LOC120074319 [Benincasa hispida]	[more]
XP_022963374.1	4.48e-65	90.35	uncharacterized protein LOC111463600 [Cucurbita moschata] >XP_023517164.1 unchar...	[more]
XP_022972738.1	2.59e-64	89.47	uncharacterized protein LOC111471253 [Cucurbita maxima]	[more]

BLAST of Chy8G153770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37530.1	1.1e-25	54.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G07795.1	1.8e-20	48.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G28725.1	3.1e-17	43.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34658:SF2	OS01G0151800 PROTEIN	coord: 3..116
None	No IPR available	PANTHER	PTHR34658	OS01G0151800 PROTEIN	coord: 3..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G153770.1	Chy8G153770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane