Chy8G153510 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G153510
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	UPF0161 protein At3g09310
Location	chrH08: 15183362 .. 15184156 (+)
RNA-Seq Expression	Chy8G153510
Synteny	Chy8G153510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCTTCCCACCACAAACTGCCACACATCCCAAAACCTTAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCTCTGCCACCGGCTTCAGTATTCGATTTAATTGCCGGAAGTTCCGTCGCTCGTTAATCCTAAGCGAAACGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGGTACTTGCCTCTTCTTCACTCAATATTTTTCTGTACTCAATGTATAGATTTCGGTGAATTAGGACATTTTAATTGTTTGCACAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTATCCATGCTTAAATTCTACAAACGTAAGTAGAATAGTGATTCTGTTTTAAGATTCTAATTCGAAGAGTTTCAGAATTCGAACCGATTGAAGATAACACGTGCCTTTGAGTTCTTACTTGAATAATTGTGAGCAGGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTAATGCTCTCATTCAAAGGGAATGAACAAGATGAGTGAGAATCGTCTTCTTGAACCTTCAGGAAGGGGATTTGTCCGTGTTTATGTTATTTGGTTTTTAATTCTGTAAAGTACTGATTTTAGGCCATTGCTGCCTTGTAGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGA

mRNA sequence

ATGGCGGTTCTTCCCACCACAAACTGCCACACATCCCAAAACCTTAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCTCTGCCACCGGCTTCAGTATTCGATTTAATTGCCGGAAGTTCCGTCGCTCGTTAATCCTAAGCGAAACGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGA

Coding sequence (CDS)

ATGGCGGTTCTTCCCACCACAAACTGCCACACATCCCAAAACCTTAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCTCTGCCACCGGCTTCAGTATTCGATTTAATTGCCGGAAGTTCCGTCGCTCGTTAATCCTAAGCGAAACGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGA

Protein sequence

MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED*

Homology

[Close]

BLAST of Chy8G153510 vs. ExPASy Swiss-Prot
Match: Q9SR32 (UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-37
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 49  LSETRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE 145
           AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146

[Close]

BLAST of Chy8G153510 vs. ExPASy Swiss-Prot
Match: Q2S3T2 (Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=SRU_1017 PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 77  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGF 136
           + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P GG G+
Sbjct: 17  IGLVRLYQLVLSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPWGGHGY 76

Query: 137 DPPRWFDEE 146
           DPPRWFDEE
Sbjct: 77  DPPRWFDEE 85

[Close]

BLAST of Chy8G153510 vs. ExPASy Swiss-Prot
Match: B0T0Z8 (Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain K31) OX=366602 GN=Caul_4526 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.8e-17
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP 139
           LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Sbjct: 12  LKAYKTTLSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGSGYDPP 71

[Close]

BLAST of Chy8G153510 vs. ExPASy Swiss-Prot
Match: Q11SD8 (Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=CHU_2420 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.4e-16
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP 139
           +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP GGSG+DP
Sbjct: 19  VKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRICSCNPWGGSGYDP 77

[Close]

BLAST of Chy8G153510 vs. ExPASy Swiss-Prot
Match: B0K8I2 (Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=Teth39_2293 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.4e-16
Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 79  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP 138
           ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Sbjct: 8   LIKLYQRYISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPFNPGGYDP 67

[Close]

BLAST of Chy8G153510 vs. ExPASy TrEMBL
Match: A0A0A0KXI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83
Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSA GFSIRFNCRK RRSLILSETRATSNSSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Chy8G153510 vs. ExPASy TrEMBL
Match: A0A1S3BJN3 (UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.4e-78
Identity = 142/152 (93.42%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  A GFSIRFNCRK RR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Chy8G153510 vs. ExPASy TrEMBL
Match: A0A5A7STY4 (UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00430 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.3e-76
Identity = 142/158 (89.87%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  A GFSIRFNCRK RR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPL------GGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPL      GGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGHCCLVGGSGFDPPRWFDEERLPEPED 158

[Close]

BLAST of Chy8G153510 vs. ExPASy TrEMBL
Match: A0A6J1EUS1 (UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.6e-72
Identity = 135/152 (88.82%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNCH  QN NPIFFAG C +   SA  FSIRFN +K RR LI+SETRATSNSSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGGCQKSHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Chy8G153510 vs. ExPASy TrEMBL
Match: A0A6J1HNH0 (UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.3e-70
Identity = 133/152 (87.50%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNCH  Q   PIFFAG C Q   SA  FSIRFN +K RR LI+SETRATSNSSA
Sbjct: 1   MAVLPTTNCHKLQ--KPIFFAGGCQQTHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NEDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYVPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 150

[Close]

BLAST of Chy8G153510 vs. NCBI nr
Match: XP_004142065.1 (UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus])

HSP 1 Score: 317 bits (811), Expect = 4.32e-109
Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSA GFSIRFNCRK RRSLILSETRATSNSSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Chy8G153510 vs. NCBI nr
Match: XP_008448003.1 (PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo])

HSP 1 Score: 299 bits (766), Expect = 3.16e-102
Identity = 142/152 (93.42%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  A GFSIRFNCRK RR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Chy8G153510 vs. NCBI nr
Match: KAA0032659.1 (UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis melo var. makuwa])

HSP 1 Score: 293 bits (749), Expect = 1.52e-99
Identity = 142/158 (89.87%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  A GFSIRFNCRK RR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLG------GSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLG      GSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGHCCLVGGSGFDPPRWFDEERLPEPED 158

[Close]

BLAST of Chy8G153510 vs. NCBI nr
Match: XP_038882937.1 (UPF0161 protein At3g09310 isoform X3 [Benincasa hispida])

HSP 1 Score: 281 bits (719), Expect = 4.64e-95
Identity = 135/152 (88.82%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVL TTNCH  QN NP FFAGRCHQRP SA  FSI++N R  RR LILS+TRATSNSS+
Sbjct: 1   MAVLSTTNCHKLQNQNPSFFAGRCHQRPFSAADFSIQYNRRNLRRPLILSKTRATSNSSS 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 152

[Close]

BLAST of Chy8G153510 vs. NCBI nr
Match: XP_023518310.1 (UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280 bits (715), Expect = 1.89e-94
Identity = 135/152 (88.82%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSATGFSIRFNCRKFRRSLILSETRATSNSSA 60
           MAVLPTTNCH  QN NPIFFAGRCHQ   SA  FSIRFN +K RR LI+SE+RATSNSSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGRCHQSRRSAAAFSIRFNGQKLRRPLIISESRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NRDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152
           TAWRLCRCNP G SGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPFGVSGFDPPRWFDEERLPEPED 152

[Close]

BLAST of Chy8G153510 vs. TAIR 10
Match: AT3G09310.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink). )

HSP 1 Score: 155.2 bits (391), Expect = 4.2e-38
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 49  LSETRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE 145
           AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146

The following BLAST results are available for this feature:

BLAST of Chy8G153510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR32	5.9e-37	73.20	UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2	[more]
Q2S3T2	2.7e-18	52.17	Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (str...	[more]
B0T0Z8	8.8e-17	61.67	Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain...	[more]
Q11SD8	7.4e-16	61.02	Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii ...	[more]
B0K8I2	7.4e-16	53.33	Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseu...	[more]

BLAST of Chy8G153510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXI4	1.5e-83	98.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1	[more]
A0A1S3BJN3	2.4e-78	93.42	UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1	[more]
A0A5A7STY4	2.3e-76	89.87	UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G0043...	[more]
A0A6J1EUS1	2.6e-72	88.82	UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=...	[more]
A0A6J1HNH0	9.3e-70	87.50	UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1	[more]

BLAST of Chy8G153510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142065.1	4.32e-109	98.68	UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 p...	[more]
XP_008448003.1	3.16e-102	93.42	PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: U...	[more]
KAA0032659.1	1.52e-99	89.87	UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis ...	[more]
XP_038882937.1	4.64e-95	88.82	UPF0161 protein At3g09310 isoform X3 [Benincasa hispida]	[more]
XP_023518310.1	1.89e-94	88.82	UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy8G153510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09310.1	4.2e-38	73.20	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002696	Putative membrane protein insertion efficiency factor	SMART	SM01234	Haemolytic_2	coord: 72..139 e-value: 6.1E-35 score: 132.1
IPR002696	Putative membrane protein insertion efficiency factor	TIGRFAM	TIGR00278	TIGR00278	coord: 78..139 e-value: 4.7E-21 score: 72.4
IPR002696	Putative membrane protein insertion efficiency factor	PFAM	PF01809	YidD	coord: 75..138 e-value: 8.9E-26 score: 89.6
IPR002696	Putative membrane protein insertion efficiency factor	PANTHER	PTHR33383	MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATED	coord: 22..148
IPR002696	Putative membrane protein insertion efficiency factor	HAMAP	MF_00386	UPF0161_YidD	coord: 72..140 score: 20.718416

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G153510.1	Chy8G153510.1	mRNA