Chy8G152930 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G152930
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Copper transporter
Location	chrH08: 14718562 .. 14719020 (-)
RNA-Seq Expression	Chy8G152930
Synteny	Chy8G152930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCTATGCCCAATATGTCTCCTCCAGCCACGAATGGCAACACCAGCATGAACAACTCAACTGGTGATTCTCCAATCATGTCGACGAAGATGATGAATATGCAGATGAGCTTCTACTGGGGGAAAGATGCTGTGATTCTATTTCCAAGGTGGCCTAAAGAGAGCCTTGGCCTATACATATTAGCCTTCTTCTTCATCTTCCTGCTGGCCTTTGCTGTCGAGTTCTTGAGCCACACGCCGCCAAACAAGCTCGGTAAGAGCCCCGTTGCTAGCGCTTCCGTACAGGCGTTGGTGTATGCTTTCAGGACAGGGTTGGCTTATCTAGTCATGTTGGCTGTTATGTCTTTCAACATTGGGATCTTTATAGCGGCTGTGGCAGGCCACACTCTCGGATTTTTTGTAGTCAAACTTCGTGTTCTTACTGCTGCAAAGAGGACTGATTCTAATGAAATTTGA

mRNA sequence

ATGGACTCTATGCCCAATATGTCTCCTCCAGCCACGAATGGCAACACCAGCATGAACAACTCAACTGGTGATTCTCCAATCATGTCGACGAAGATGATGAATATGCAGATGAGCTTCTACTGGGGGAAAGATGCTGTGATTCTATTTCCAAGGTGGCCTAAAGAGAGCCTTGGCCTATACATATTAGCCTTCTTCTTCATCTTCCTGCTGGCCTTTGCTGTCGAGTTCTTGAGCCACACGCCGCCAAACAAGCTCGGTAAGAGCCCCGTTGCTAGCGCTTCCGTACAGGCGTTGGTGTATGCTTTCAGGACAGGGTTGGCTTATCTAGTCATGTTGGCTGTTATGTCTTTCAACATTGGGATCTTTATAGCGGCTGTGGCAGGCCACACTCTCGGATTTTTTGTAGTCAAACTTCGTGTTCTTACTGCTGCAAAGAGGACTGATTCTAATGAAATTTGA

Coding sequence (CDS)

ATGGACTCTATGCCCAATATGTCTCCTCCAGCCACGAATGGCAACACCAGCATGAACAACTCAACTGGTGATTCTCCAATCATGTCGACGAAGATGATGAATATGCAGATGAGCTTCTACTGGGGGAAAGATGCTGTGATTCTATTTCCAAGGTGGCCTAAAGAGAGCCTTGGCCTATACATATTAGCCTTCTTCTTCATCTTCCTGCTGGCCTTTGCTGTCGAGTTCTTGAGCCACACGCCGCCAAACAAGCTCGGTAAGAGCCCCGTTGCTAGCGCTTCCGTACAGGCGTTGGTGTATGCTTTCAGGACAGGGTTGGCTTATCTAGTCATGTTGGCTGTTATGTCTTTCAACATTGGGATCTTTATAGCGGCTGTGGCAGGCCACACTCTCGGATTTTTTGTAGTCAAACTTCGTGTTCTTACTGCTGCAAAGAGGACTGATTCTAATGAAATTTGA

Protein sequence

MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI*

Homology

[Close]

BLAST of Chy8G152930 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.0e-22
Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 0


Query: 2   DSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYI 61
           D M +M PP+ + ++  N++T         MM M M+F+WGK+  +LF  WP  S G+Y 
Sbjct: 4   DHMHDMPPPSPSSSSMSNHTT-------PHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYA 63

Query: 62  LAFFFIFLLAFAVEFLSHTPPNKL-GKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 121
           L    IFLLA   E+L+H+P  ++ G +  A+   Q  VY  +TGL+YLVMLAVMSFN G
Sbjct: 64  LCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAG 123

Query: 122 IFIAAVAGHTLGFFV 136
           +FI A+AG+ +GFF+
Sbjct: 124 VFIVAIAGYGVGFFL 131

[Close]

BLAST of Chy8G152930 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-20
Identity = 63/134 (47.01%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 3   SMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 62
           +MP  SP      +SM N T  + IM      M M+F+WGK+  ILF  WP  SLG+Y+L
Sbjct: 5   NMPPSSP------SSMVNHTNSNMIM------MHMTFFWGKNTEILFSGWPGTSLGMYVL 64

Query: 63  AFFFIFLLAFAVEFLSHTPPNK-LGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIGI 122
               +FLLA  VE+L+H+   +  G +  A   VQ  VY  +TGLAYLVMLAVMSFN G+
Sbjct: 65  CLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGV 124

Query: 123 FIAAVAGHTLGFFV 136
           FI A+AG  +GF +
Sbjct: 125 FIVAIAGFAVGFML 126

[Close]

BLAST of Chy8G152930 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-19
Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 3   SMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 62
           S  + SP +   N SMN   G   +   KMM M M+F+WGK+  +LF  WP  S G+Y L
Sbjct: 14  SSSSSSPSSMMNNGSMNEGGGHHHM---KMM-MHMTFFWGKNTEVLFSGWPGTSSGMYAL 73

Query: 63  AFFFIFLLAFAVEFLSHTP--PNKLGKSPVASAS-VQALVYAFRTGLAYLVMLAVMSFNI 122
              F+F LA   E+L+H+       G S   +A  +Q  VY  R GLAYLVMLAVMSFN 
Sbjct: 74  CLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNA 133

Query: 123 GIFIAAVAGHTLGFFV 136
           G+F+ A+AGH +GF +
Sbjct: 134 GVFLVALAGHAVGFML 145

[Close]

BLAST of Chy8G152930 vs. ExPASy Swiss-Prot
Match: Q5ZD08 (Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-16
Identity = 51/106 (48.11%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 35  MQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPVAS-- 94
           M M+FYWGK++ ILF  WP  S G+Y LA   +F LA  +EFL    P     S + S  
Sbjct: 28  MHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLG--SPRVQESSSLGSRR 87

Query: 95  -ASVQALVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVK 138
             +  A V+A R GLAYL+MLA+MSFN+G+ +AAVAGH  GF   +
Sbjct: 88  RRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGFLAFR 131

[Close]

BLAST of Chy8G152930 vs. ExPASy Swiss-Prot
Match: Q60EN8 (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 26  PIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPN-- 85
           P    K   M M+F+WGK+  +LF  WP    G+Y LA  F+F LA  +EF  +      
Sbjct: 14  PAPVKKARYMHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGYRVLEAR 73

Query: 86  -KLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVK 138
               ++P A+A+++  V+A R G+AYL+MLA+MSFN G+F+A VAGH  GF   +
Sbjct: 74  LARRRAPRAAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFR 128

[Close]

BLAST of Chy8G152930 vs. ExPASy TrEMBL
Match: A0A0A0KZS9 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_4G303720 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.8e-72
Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMPNMSPP  NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY
Sbjct: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSP+ASASVQA VYAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 153
           IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNE+
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 150

[Close]

BLAST of Chy8G152930 vs. ExPASy TrEMBL
Match: A0A5A7TSJ7 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00100 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMP M PPA NGNTSMNNSTGDSP MST MMNMQM+FYWGK+ VILFP WPKESL LY
Sbjct: 1   MDSMP-MPPPAMNGNTSMNNSTGDSPNMSTTMMNMQMTFYWGKEVVILFPGWPKESLALY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVA AS+QA +YAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVAIASLQAFIYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 153
           IFIAAVAGHTLGFFVVKLRVLT AKRTDSNE+
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTVAKRTDSNEV 151

[Close]

BLAST of Chy8G152930 vs. ExPASy TrEMBL
Match: A0A1S4DWU9 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103490782 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMP M PPA NGNTSMNNSTGDSP MST MMNMQM+FYWGK+ VILFP WPKESL LY
Sbjct: 1   MDSMP-MPPPAMNGNTSMNNSTGDSPNMSTTMMNMQMTFYWGKEVVILFPGWPKESLALY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVA AS+QA +YAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVAIASLQAFIYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 153
           IFIAAVAGHTLGFFVVKLRVLT AKRTDSNE+
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTVAKRTDSNEV 151

[Close]

BLAST of Chy8G152930 vs. ExPASy TrEMBL
Match: A0A6J1DB95 (Copper transporter OS=Momordica charantia OX=3673 GN=LOC111019407 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56
Identity = 118/152 (77.63%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSM +MSPPA +GNTS NNSTG++  M+     MQMSFYWGKDAV+LF  WPKESLG+Y
Sbjct: 76  MDSM-DMSPPAMDGNTSTNNSTGNNMTMTMMTTKMQMSFYWGKDAVVLFSGWPKESLGMY 135

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAF VEFLSHTPPNKLGKSPV  AS+QA++YAFRTGLAYLVMLAVMSFN+G
Sbjct: 136 ILAFFFIFLLAFTVEFLSHTPPNKLGKSPVVGASIQAVIYAFRTGLAYLVMLAVMSFNVG 195

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 153
           IFIAAVAGHTLGFFVV++  LT  KRTDS E+
Sbjct: 196 IFIAAVAGHTLGFFVVEVHALTVEKRTDSTEV 226

[Close]

BLAST of Chy8G152930 vs. ExPASy TrEMBL
Match: A0A6J1GDY7 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111453311 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 9.0e-49
Identity = 109/152 (71.71%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           M+SMP MSPPA +G         D+P+       MQMSFYWGKDAV+LF  WPK+S+G+Y
Sbjct: 1   MESMP-MSPPAMDGR--------DTPM-------MQMSFYWGKDAVVLFSEWPKQSVGMY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFA+EFLSHT P KL KSPV SAS+QALVYAFRTGLAYLVMLAVMSFN+G
Sbjct: 61  ILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 153
           +FIAAVAGH+LG+FVVKLR LTA KR+D NE+
Sbjct: 121 MFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV 136

[Close]

BLAST of Chy8G152930 vs. NCBI nr
Match: XP_011653663.1 (copper transporter 2 [Cucumis sativus] >XP_031740552.1 copper transporter 2 [Cucumis sativus] >KGN54324.1 hypothetical protein Csa_018091 [Cucumis sativus])

HSP 1 Score: 283 bits (723), Expect = 1.06e-95
Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMPNMSPP  NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY
Sbjct: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSP+ASASVQA VYAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 152
           IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNE+
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 150

[Close]

BLAST of Chy8G152930 vs. NCBI nr
Match: XP_016900457.1 (PREDICTED: copper transporter 2-like [Cucumis melo] >KAA0045106.1 copper transporter 2-like [Cucumis melo var. makuwa] >TYJ96222.1 copper transporter 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (668), Expect = 2.68e-87
Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMP M PPA NGNTSMNNSTGDSP MST MMNMQM+FYWGK+ VILFP WPKESL LY
Sbjct: 1   MDSMP-MPPPAMNGNTSMNNSTGDSPNMSTTMMNMQMTFYWGKEVVILFPGWPKESLALY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVA AS+QA +YAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVAIASLQAFIYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 152
           IFIAAVAGHTLGFFVVKLRVLT AKRTDSNE+
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTVAKRTDSNEV 151

[Close]

BLAST of Chy8G152930 vs. NCBI nr
Match: XP_038883235.1 (copper transporter 2-like [Benincasa hispida])

HSP 1 Score: 241 bits (615), Expect = 3.31e-79
Identity = 126/153 (82.35%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMM-NMQMSFYWGKDAVILFPRWPKESLGL 60
           M+SMP MSPPA +GNTSMNNS GDSP+M+     NMQMSFYWGKDAV+LF  WPKESLGL
Sbjct: 1   MESMP-MSPPAMDGNTSMNNSIGDSPMMTPMTTTNMQMSFYWGKDAVVLFSGWPKESLGL 60

Query: 61  YILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNI 120
           YILAFFFIFLLAFAVEFLSHTPPNKL KSP+ASAS+QA+VYAFRT L YLVMLAVMSFN+
Sbjct: 61  YILAFFFIFLLAFAVEFLSHTPPNKLSKSPIASASIQAVVYAFRTSLVYLVMLAVMSFNV 120

Query: 121 GIFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 152
           GIFIAAVAGHTLGFFVVK+R LT AK TDSNE+
Sbjct: 121 GIFIAAVAGHTLGFFVVKVRALTVAKGTDSNEV 152

[Close]

BLAST of Chy8G152930 vs. NCBI nr
Match: XP_022151475.1 (copper transporter 6-like [Momordica charantia])

HSP 1 Score: 231 bits (589), Expect = 3.50e-74
Identity = 118/152 (77.63%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSM +MSPPA +GNTS NNSTG++  M+     MQMSFYWGKDAV+LF  WPKESLG+Y
Sbjct: 76  MDSM-DMSPPAMDGNTSTNNSTGNNMTMTMMTTKMQMSFYWGKDAVVLFSGWPKESLGMY 135

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAF VEFLSHTPPNKLGKSPV  AS+QA++YAFRTGLAYLVMLAVMSFN+G
Sbjct: 136 ILAFFFIFLLAFTVEFLSHTPPNKLGKSPVVGASIQAVIYAFRTGLAYLVMLAVMSFNVG 195

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 152
           IFIAAVAGHTLGFFVV++  LT  KRTDS E+
Sbjct: 196 IFIAAVAGHTLGFFVVEVHALTVEKRTDSTEV 226

[Close]

BLAST of Chy8G152930 vs. NCBI nr
Match: XP_022950132.1 (copper transporter 2-like [Cucurbita moschata])

HSP 1 Score: 205 bits (521), Expect = 4.08e-65
Identity = 109/152 (71.71%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MDSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           M+SMP MSPPA +G         D+P+M       QMSFYWGKDAV+LF  WPK+S+G+Y
Sbjct: 1   MESMP-MSPPAMDGR--------DTPMM-------QMSFYWGKDAVVLFSEWPKQSVGMY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFA+EFLSHT P KL KSPV SAS+QALVYAFRTGLAYLVMLAVMSFN+G
Sbjct: 61  ILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 152
           +FIAAVAGH+LG+FVVKLR LTA KR+D NE+
Sbjct: 121 MFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV 136

[Close]

BLAST of Chy8G152930 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23
Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 0


Query: 2   DSMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYI 61
           D M +M PP+ + ++  N++T         MM M M+F+WGK+  +LF  WP  S G+Y 
Sbjct: 4   DHMHDMPPPSPSSSSMSNHTT-------PHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYA 63

Query: 62  LAFFFIFLLAFAVEFLSHTPPNKL-GKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIG 121
           L    IFLLA   E+L+H+P  ++ G +  A+   Q  VY  +TGL+YLVMLAVMSFN G
Sbjct: 64  LCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAG 123

Query: 122 IFIAAVAGHTLGFFV 136
           +FI A+AG+ +GFF+
Sbjct: 124 VFIVAIAGYGVGFFL 131

[Close]

BLAST of Chy8G152930 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 63/134 (47.01%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 3   SMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 62
           +MP  SP      +SM N T  + IM      M M+F+WGK+  ILF  WP  SLG+Y+L
Sbjct: 5   NMPPSSP------SSMVNHTNSNMIM------MHMTFFWGKNTEILFSGWPGTSLGMYVL 64

Query: 63  AFFFIFLLAFAVEFLSHTPPNK-LGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIGI 122
               +FLLA  VE+L+H+   +  G +  A   VQ  VY  +TGLAYLVMLAVMSFN G+
Sbjct: 65  CLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGV 124

Query: 123 FIAAVAGHTLGFFV 136
           FI A+AG  +GF +
Sbjct: 125 FIVAIAGFAVGFML 126

[Close]

BLAST of Chy8G152930 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-20
Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 3   SMPNMSPPATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 62
           S  + SP +   N SMN   G   +   KMM M M+F+WGK+  +LF  WP  S G+Y L
Sbjct: 14  SSSSSSPSSMMNNGSMNEGGGHHHM---KMM-MHMTFFWGKNTEVLFSGWPGTSSGMYAL 73

Query: 63  AFFFIFLLAFAVEFLSHTP--PNKLGKSPVASAS-VQALVYAFRTGLAYLVMLAVMSFNI 122
              F+F LA   E+L+H+       G S   +A  +Q  VY  R GLAYLVMLAVMSFN 
Sbjct: 74  CLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNA 133

Query: 123 GIFIAAVAGHTLGFFV 136
           G+F+ A+AGH +GF +
Sbjct: 134 GVFLVALAGHAVGFML 145

[Close]

BLAST of Chy8G152930 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 35  MQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPVASAS 94
           M M+F+WGK   +LF  WP  SL +Y +    IF+++   E LS     K G + +    
Sbjct: 30  MHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGL 89

Query: 95  VQALVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEI 153
           +Q  VY  R  L+YLVMLAVMSFN G+F+AA+AG  LGF +   R   A       E+
Sbjct: 90  LQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEV 147

[Close]

BLAST of Chy8G152930 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 11  ATNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLL 70
           A N  T+    T   P +      +  +FYWG +  +LF  WP    G+Y LA  F+F L
Sbjct: 12  AWNTTTTTQTQTPHRPSL------LHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFL 71

Query: 71  AFAVEFL---SHTPPNKLGKSPVASASVQALVYAFRTGLAYLVMLAVMSFNIGIFIAAVA 130
           AF  E+L   S     K G   +A  + +  +Y  ++G +YLV+LAV+SFN G+F+AA+ 
Sbjct: 72  AFLAEWLARCSDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIF 131

Query: 131 GHTLGFFVVKLR 140
           GH LGF V + R
Sbjct: 132 GHALGFAVFRGR 137

The following BLAST results are available for this feature:

BLAST of Chy8G152930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STG2	7.0e-22	44.44	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	2.9e-20	47.01	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q39065	4.2e-19	44.85	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q5ZD08	1.5e-16	48.11	Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1	[more]
Q60EN8	2.6e-16	41.74	Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1	[more]

BLAST of Chy8G152930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZS9	5.8e-72	96.71	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_4G303720 PE=3 SV=1	[more]
A0A5A7TSJ7	1.1e-65	89.47	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209...	[more]
A0A1S4DWU9	1.1e-65	89.47	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103490782 PE=3 SV=1	[more]
A0A6J1DB95	2.0e-56	77.63	Copper transporter OS=Momordica charantia OX=3673 GN=LOC111019407 PE=3 SV=1	[more]
A0A6J1GDY7	9.0e-49	71.71	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111453311 PE=3 SV=1	[more]

BLAST of Chy8G152930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653663.1	1.06e-95	96.71	copper transporter 2 [Cucumis sativus] >XP_031740552.1 copper transporter 2 [Cuc...	[more]
XP_016900457.1	2.68e-87	89.47	PREDICTED: copper transporter 2-like [Cucumis melo] >KAA0045106.1 copper transpo...	[more]
XP_038883235.1	3.31e-79	82.35	copper transporter 2-like [Benincasa hispida]	[more]
XP_022151475.1	3.50e-74	77.63	copper transporter 6-like [Momordica charantia]	[more]
XP_022950132.1	4.08e-65	71.71	copper transporter 2-like [Cucurbita moschata]	[more]

BLAST of Chy8G152930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46900.1	4.9e-23	44.44	copper transporter 2	[more]
AT2G26975.1	2.1e-21	47.01	Ctr copper transporter family	[more]
AT5G59030.1	3.0e-20	44.85	copper transporter 1	[more]
AT5G59040.1	2.4e-17	40.68	copper transporter 3	[more]
AT2G37925.1	3.4e-16	37.88	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 93..135 e-value: 2.2E-10 score: 41.3 coord: 37..78 e-value: 4.5E-6 score: 27.3
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 21..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR12483:SF85	CTR FAMILY COPPER TRANSPORTER	coord: 21..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G152930.1	Chy8G152930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity