Chy8G151310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G151310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	PMD domain-containing protein
Location	chrH08: 12539482 .. 12540667 (+)
RNA-Seq Expression	Chy8G151310
Synteny	Chy8G151310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTATGATAAGCCAATTACGCAGAAGCAAAAGAAGGAGTCACATTTCAAATCCACCAAAAAACCTGATGTTTCGAAGATCGAGCCTAGAGGATGGTCCTCTAGAGAAAACATGTTCTTTGCAAAACTCAGAATAAGGTATGATTTGAAGGATGAAACGTATTTCGCTACCTTTTTATCTTGTTGGTTGTGCCTCTTCGTGTTTCTGTAGAAGGGATCATTTCTTCGCCTTGAGATATTTAAGATTGCAAGCTTAATGGTCGATAGAGCTATCTACTTTGTAGTCCTAATTTTAGCCAACATATATCATGGGCTAGGTTTGATAACTAAAGCCTGAATCCAATAGGATGCATGGACTTTTACTTTTCCATGCATTACGTCCATGACTAGTTAGCCCATTATTTTGGTACACATTACCCATTTCTGGCAAAAGTTCGAGATCTCAAGATGGCTAACTTTTTCGACGAAGGTAGGTCTATTTATTTTGGAGAATATGAGGAGCGAGAACTGATCCACAAAGGTGCAAGAATTCACTGGCACGCCAAGCTTCAGAACCAGAATAAACATGAACGCATGGCTGATAATCATGATTCATTGTTTTTGTAGCCTTCTTATTTTGTAAGTATGTGCCCCTGCTACTTATCATCCCACTATGGAAATGTTTGGATCATAATATCATACAGTCCATATCGATTTGAGCAGCAGTTTGGCTTTTACGATTATATCCCTAATGATATAGGTGGCATGCCACCTGCAATCACATTGAAGAATTTATTACATCAGTAGAGGATATGTACGAGGTACAACACTTTATCTAAGTTATACTAGCCTGCTCGTTTGTTAGAACCTTGCAAGCATGTGATGCAGCGATTTAAAAATTGATGGGCCACGAAGCACGAAACCTATTTTGAGGATAATAGACATCATTTGGTAAGCAGTGTCATTCCTCCCTCATCACAACCCAAACTACCCAAGAACCGAGGGAGCAACTTGAGTGGTAAACAGATTCACTTGGTTGAAGCGATGGCTTCTACCCTCGAGAGGGAAGTGAAAGAGCATATGATGAGAACGATAGCAGCAAAAGTGATCGTCATTGGAAGAGATCTTCGAAGAAAACGAATGTATCAGGTGATGATTCCTGCGGAAGGGGTTCAAGTGCTATAGGAATCCCTAATGTTCCACCATTG

mRNA sequence

AGCTATGATAAGCCAATTACGCAGAAGCAAAAGAAGGAGTCACATTTCAAATCCACCAAAAAACCTGATGTTTCGAAGATCGAGCCTAGAGGATGGTCCTCTAGAGAAAACATGTTCTTTGCAAAACTCAGAATAAGGTATGATTTGAAGGATGAAACGTATTTCGCTACCTTTTTATCTTGTTGGTTGTGCCTCTTCGTGTTTCTGTAGAAGGGATCATTTCTTCGCCTTGAGATATTTAAGATTGCAAGCTTAATGGTCGATAGAGCTATCTACTTTGTAGTCCTAATTTTAGCCAACATATATCATGGGCTAGGTTTGATAACTAAAGCCTGAATCCAATAGGATGCATGGACTTTTACTTTTCCATGCATTACGTCCATGACTAGTTAGCCCATTATTTTGGTACACATTACCCATTTCTGGCAAAAGTTCGAGATCTCAAGATGGCTAACTTTTTCGACGAAGGTAGGTCTATTTATTTTGGAGAATATGAGGAGCGAGAACTGATCCACAAAGGTGCAAGAATTCACTGGCACGCCAAGCTTCAGAACCAGAATAAACATGAACGCATGGCTGATAATCATGATTCATTGTTTTTGTAGCCTTCTTATTTTGTAAGTATGTGCCCCTGCTACTTATCATCCCACTATGGAAATGTTTGGATCATAATATCATACAGTCCATATCGATTTGAGCAGCAGTTTGGCTTTTACGATTATATCCCTAATGATATAGGTGGCATGCCACCTGCAATCACATTGAAGAATTTATTACATCACGATTTAAAAATTGATGGGCCACGAAGCACGAAACCTATTTTGAGGATAATAGACATCATTTGGTAAGCAGTGTCATTCCTCCCTCATCACAACCCAAACTACCCAAGAACCGAGGGAGCAACTTGAGTGGTAAACAGATTCACTTGGTTGAAGCGATGGCTTCTACCCTCGAGAGGGAAGTGAAAGAGCATATGATGAGAACGATAGCAGCAAAAGTGATCGTCATTGGAAGAGATCTTCGAAGAAAACGAATGTATCAGGTGATGATTCCTGCGGAAGGGGTTCAAGTGCTATAGGAATCCCTAATGTTCCACCATTG

Coding sequence (CDS)

AGCTATGATAAGCCAATTACGCAGAAGCAAAAGAAGGAGTCACATTTCAAATCCACCAAAAAACCTGATGTTTCGAAGATCGAGCCTAGAGGATGGTCCTCTAGAGAAAACATGTTCTTTGCAAAACTCAGAATAAGGTATGATTTGAAGGATGAAACGTATTTCGCTACCTTTTTATCTTGTTGGTTGTGCCTCTTCGTGTTTCTGTAGAAGGGATCATTTCTTCGCCTTGAGATATTTAAGATTGCAAGCTTAATGGTCGATAGAGCTATCTACTTTGTAGTCCTAATTTTAGCCAACATATATCATGGGCTAGGTTTGATAACTAAAGCCTGAATCCAATAGGATGCATGGACTTTTACTTTTCCATGCATTACGTCCATGACTAGTTAGCCCATTATTTTGGTACACATTACCCATTTCTGGCAAAAGTTCGAGATCTCAAGATGGCTAACTTTTTCGACGAAGGTAGGTCTATTTATTTTGGAGAATATGAGGAGCGAGAACTGATCCACAAAGGTGCAAGAATTCACTGGCACGCCAAGCTTCAGAACCAGAATAAACATGAACGCATGGCTGATAATCATGATTCATTGTTTTTGTAGCCTTCTTATTTTGTAAGTATGTGCCCCTGCTACTTATCATCCCACTATGGAAATGTTTGGATCATAATATCATACAGTCCATATCGATTTGAGCAGCAGTTTGGCTTTTACGATTATATCCCTAATGATATAGGTGGCATGCCACCTGCAATCACATTGAAGAATTTATTACATCACGATTTAAAAATTGATGGGCCACGAAGCACGAAACCTATTTTGAGGATAATAGACATCATTTGGTAAGCAGTGTCATTCCTCCCTCATCACAACCCAAACTACCCAAGAACCGAGGGAGCAACTTGAGTGGTAAACAGATTCACTTGGTTGAAGCGATGGCTTCTACCCTCGAGAGGGAAGTGAAAGAGCATATGATGAGAACGATAGCAGCAAAAGTGATCGTCATTGGAAGAGATCTTCGAAGAAAACGAATGTATCAGGTGATGATTCCTGCGGAAGGGGTTCAAGTGCTATAGGAATCCCTAATGTTCCACCATTG

Protein sequence

SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLSCWLCLFVFL*KGSFLRLEIFKIASLMVDRAIYFVVLILANIYHGLGLITKA*IQ*DAWTFTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTGTPSFRTRINMNAWLIIMIHCFCSLLIL*VCAPATYHPTMEMFGS*YHTVHIDLSSSLAFTIISLMI*VACHLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQCHSSLITTQTTQEPREQLEW*TDSLG*SDGFYPREGSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSSAIGIPNVPPL

Homology

[Close]

BLAST of Chy8G151310 vs. ExPASy TrEMBL
Match: A0A5D3C543 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00620 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.9e-37
Identity = 133/368 (36.14%), Postives = 162/368 (44.02%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ PD  KI+ R WSSRE+M FA+L I+ DLKDETY A FLS
Sbjct: 218 SYDKPTTRKQKKASRSKSTQNPDGLKIQAREWSSRESMLFAELGIKDDLKDETYLAAFLS 277

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLR  +F+ ASLM    IY   V +LANIYHGLGLITKA        
Sbjct: 278 CWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVPVLANIYHGLGLITKASNPIGRMD 337

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTG 180
           F FP            +H  H W            T+V    + N   E  S    E+  
Sbjct: 338 FHFP------------MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEA 397

Query: 181 TPSFRTRINMNAWLIIMIHCFCSLLIL*VCAPATYHPTMEMFGS*YHTVHIDLSSSLAFT 240
                           +IH          CA   +H  ++      H V    SS L  +
Sbjct: 398 RE--------------LIH---------NCARIQWHANLQNRSKHEHMVDTHDSSFLQMS 457

Query: 241 IISLMI*VACHLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQCHSSLITTQTTQEPR 300
                             Y+  + K  G                 C+      +  +   
Sbjct: 458 ------------------YFPRLPKNRG-----------------CNLGGKEIRLVEAMA 500

Query: 301 EQLEW*TDSLG*SDGFYPREGSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSSAI 360
             LE               E  +   DE+DSSKSDRHWKR  KK  VSGD   GRG +A+
Sbjct: 518 ANLE---------------EEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLTAL 500

Query: 361 GIPNVPPL 368
            +P+VPPL
Sbjct: 578 EVPDVPPL 500

[Close]

BLAST of Chy8G151310 vs. ExPASy TrEMBL
Match: A0A5A7UVI5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00470 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.2e-36
Identity = 139/386 (36.01%), Postives = 177/386 (45.85%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ PD SKI+ R WSSRE+M FA+L IR DLKDETY A FLS
Sbjct: 93  SYDKPKTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLS 152

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLR E+F++ASLMV   IY   V +LANIYHGLGLITKA        
Sbjct: 153 CWLCLFVFPKKGSFLRPEVFRVASLMVAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 212

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTG 180
           F FP            +H  H W             +V    + N   E  S    ++  
Sbjct: 213 FHFP------------MHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGKYEA 272

Query: 181 TPSFR--TRINMNAWL--------IIMIHCFCSLLIL*VCAP---ATYHPTMEMFGS*YH 240
                   RI  +A L        ++  H    L +     P       P + +    YH
Sbjct: 273 HELIHNGARIQWHANLHNRNKHERMVDTHDSSFLQMSYFDLPNDIGGMPPAITLDNILYH 332

Query: 241 TVHIDLSSSLAFTIISLMI*VAC-HLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQC 300
                  ++L+   +       C H+      ++ T       + R+             
Sbjct: 333 WRICMRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFEDNRH------------- 392

Query: 301 HSSLITTQTTQEPREQLEW*TDSLG*S----DGFYPREGSERAYDENDSSKSDRHWKRSS 360
           H          +PR      ++  G      +   P    E    E+DS+KSDRHWKR  
Sbjct: 393 HLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEDEVNEHESDSNKSDRHWKRPL 452

Query: 361 KKTNVSGDDSCGRGSSAIGIPNVPPL 368
           KKT VSGD   GRG SA+ +P+VPPL
Sbjct: 453 KKTKVSGDHPDGRGLSALEVPDVPPL 453

[Close]

BLAST of Chy8G151310 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35
Identity = 140/408 (34.31%), Postives = 185/408 (45.34%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ PD SKI+ R WSSRE+M FA+L IR DLKDETY A FLS
Sbjct: 269 SYDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLS 328

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLRL +F++ASLM    IY   V +LANIYHGLGLITKA        
Sbjct: 329 CWLCLFVFPQKGSFLRLGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 388

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTG 180
           F FP            +H  H W             +V    + N   E  S    E+  
Sbjct: 389 FHFP------------MHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGEYEA 448

Query: 181 TPSFRTRINMN-------------------------AWLIIMIHCFCSLLIL*VCAPATY 240
                  + +                          ++ + M  C+ S          +Y
Sbjct: 449 RELIHNGVRIQWHANLHNRNKHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTWIITSY 508

Query: 241 HPTM--EMFGS*YHTVHIDLSS-SLAFTIISLMI-*VACHLQSH*RIYYITI*KL--MGH 300
            P      FG  Y  +  D+     A T+ +++     C  ++     Y+ +  L    H
Sbjct: 509 SPYRFGRQFGF-YQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLEPCKH 568

Query: 301 EARNLF*G**T---SFGKQCHSSLITTQTTQEPREQLEW*TDS-LG*S-----DGFYPRE 360
             +       T   ++ +     L+++      + +L     S LG       +   P  
Sbjct: 569 VTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNL 628

Query: 361 GSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSSAIGIPNVPPL 368
             E    E+DS+KSDRHWKR  KK  VSGD   GRG SA+ +P+VPPL
Sbjct: 629 EDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPL 663

[Close]

BLAST of Chy8G151310 vs. ExPASy TrEMBL
Match: A0A5A7U8X8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002060 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.0e-35
Identity = 133/370 (35.95%), Postives = 163/370 (44.05%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ P+ SKI+ R WSSRE+M FA+L IR DLKDETY A FLS
Sbjct: 230 SYDKPTTRKQKKASRSKSTQNPNGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLS 289

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLR  +F++ASLM    IY   V +LANIYHGLGLITKA        
Sbjct: 290 CWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 349

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFE--ISRWLTFSTKVGLFILENMRSEN*STKVQEF 180
           F FP            +H  H W K E  +    +   ++  F L N           + 
Sbjct: 350 FHFP------------MHYVHGWNKHERMVDTHDSSFLQMSYFDLPN-----------DI 409

Query: 181 TGTPSFRTRINMNAWLIIMIHCFCSLLIL*VCAPATYHPTMEMFGS*YHTVHIDLSSSLA 240
            G P   T  N+                        YH  +  + + + T   D    L 
Sbjct: 410 GGMPPAITLDNI-----------------------LYHWRIYWWTTKHGTYFEDNRHYLV 469

Query: 241 FTIISLMI*VACHLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQCHSSLITTQTTQE 300
            + I           S  R+       L G E R +                        
Sbjct: 470 SSAIP--------RPSQPRLPKNRGSNLGGKEIRLV------------------------ 506

Query: 301 PREQLEW*TDSLG*SDGFYPREGSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSS 360
                          +   P    E    E+DS+KSDRHWKR  KK  VSGD   GRG S
Sbjct: 530 ---------------EAMAPNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLS 506

Query: 361 AIGIPNVPPL 368
           A+ +P+VPPL
Sbjct: 590 ALEVPDVPPL 506

[Close]

BLAST of Chy8G151310 vs. ExPASy TrEMBL
Match: A0A5A7TZZ9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2963G00230 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-33
Identity = 129/371 (34.77%), Postives = 159/371 (42.86%), Query Frame = 0


Query: 2   YDKPITQK----QKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFAT 61
           YD+  + K    QKK S  KST+ PD  KI+ R WSSRE+M FA+L I+ DLKDETY A 
Sbjct: 185 YDRSTSSKNDSQQKKASRSKSTQNPDGLKIQAREWSSRESMLFAELGIKDDLKDETYLAA 244

Query: 62  FLSCWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*D 121
           FLSCWLCLFVF  KGSFLR  +F+ ASLM    IY   V +LANIYHGLGLITKA     
Sbjct: 245 FLSCWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVPVLANIYHGLGLITKASNPIG 304

Query: 122 AWTFTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQE 181
              F FP            +H  H W            T+V    + N   E  S    E
Sbjct: 305 RMDFHFP------------MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGE 364

Query: 182 FTGTPSFRTRINMNAWLIIMIHCFCSLLIL*VCAPATYHPTMEMFGS*YHTVHIDLSSSL 241
           +                  +IH          CA   +H  ++      H V    SS L
Sbjct: 365 YEARE--------------LIH---------NCARIQWHANLQNRSKHEHMVDTHDSSFL 424

Query: 242 AFTIISLMI*VACHLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQCHSSLITTQTTQ 301
             +                  Y+  + K  G                 C+      +  +
Sbjct: 425 QMS------------------YFPRLPKNRG-----------------CNLGGKEIRLVE 470

Query: 302 EPREQLEW*TDSLG*SDGFYPREGSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGS 361
                LE               E  +   DE+DSSKSDRHWKR  KK  VSGD   GRG 
Sbjct: 485 AMAANLE---------------EEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGL 470

Query: 362 SAIGIPNVPPL 368
           +A+ +P+VPPL
Sbjct: 545 TALEVPDVPPL 470

[Close]

BLAST of Chy8G151310 vs. NCBI nr
Match: TYK06278.1 (hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (420), Expect = 1.68e-41
Identity = 133/368 (36.14%), Postives = 162/368 (44.02%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ PD  KI+ R WSSRE+M FA+L I+ DLKDETY A FLS
Sbjct: 218 SYDKPTTRKQKKASRSKSTQNPDGLKIQAREWSSRESMLFAELGIKDDLKDETYLAAFLS 277

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLR  +F+ ASLM    IY   V +LANIYHGLGLITKA        
Sbjct: 278 CWLCLFVFPQKGSFLRPGVFRAASLMAADTIYSLAVPVLANIYHGLGLITKASNPIGRMD 337

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTG 180
           F FP            +H  H W            T+V    + N   E  S    E+  
Sbjct: 338 FHFP------------MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEA 397

Query: 181 TPSFRTRINMNAWLIIMIHCFCSLLIL*VCAPATYHPTMEMFGS*YHTVHIDLSSSLAFT 240
                           +IH          CA   +H  ++      H V    SS L  +
Sbjct: 398 RE--------------LIH---------NCARIQWHANLQNRSKHEHMVDTHDSSFLQMS 457

Query: 241 IISLMI*VACHLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQCHSSLITTQTTQEPR 300
                             Y+  + K  G                 C+      +  +   
Sbjct: 458 ------------------YFPRLPKNRG-----------------CNLGGKEIRLVEAMA 500

Query: 301 EQLEW*TDSLG*SDGFYPREGSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSSAI 360
             LE               E  +   DE+DSSKSDRHWKR  KK  VSGD   GRG +A+
Sbjct: 518 ANLE---------------EEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLTAL 500

Query: 361 GIPNVPPL 367
            +P+VPPL
Sbjct: 578 EVPDVPPL 500

[Close]

BLAST of Chy8G151310 vs. NCBI nr
Match: KAA0057575.1 (hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (406), Expect = 7.19e-41
Identity = 142/389 (36.50%), Postives = 180/389 (46.27%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ PD SKI+ R WSSRE+M FA+L IR DLKDETY A FLS
Sbjct: 93  SYDKPKTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLS 152

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLR E+F++ASLMV   IY   V +LANIYHGLGLITKA        
Sbjct: 153 CWLCLFVFPKKGSFLRPEVFRVASLMVAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 212

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTG 180
           F FP            +H  H W             +V    + N   E  S    ++  
Sbjct: 213 FHFP------------MHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGKYEA 272

Query: 181 TPSFRT--RINMNAWLIIMIHCFCSLLIL*VCAPATYHPTM--EMFGS*YHTVHIDLSSS 240
                   RI  +A L                     H  M      S     + DL + 
Sbjct: 273 HELIHNGARIQWHANL----------------HNRNKHERMVDTHDSSFLQMSYFDLPND 332

Query: 241 L-----AFTIISLMI*VA-CHLQSH*RIYYITI*KL--MGHEARNLF*G**TSFGKQCHS 300
           +     A T+ +++     C  ++     Y+    L    H  +       T  G     
Sbjct: 333 IGGMPPAITLDNILYHWRICMRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFED 392

Query: 301 S---LITTQTTQEPREQLEW*TDS-LG*SD-----GFYPREGSERAYDENDSSKSDRHWK 360
           +   L+++      + +L     S LG  +        P    E    E+DS+KSDRHWK
Sbjct: 393 NRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEDEVNEHESDSNKSDRHWK 452

Query: 361 RSSKKTNVSGDDSCGRGSSAIGIPNVPPL 367
           R  KKT VSGD   GRG SA+ +P+VPPL
Sbjct: 453 RPLKKTKVSGDHPDGRGLSALEVPDVPPL 453

[Close]

BLAST of Chy8G151310 vs. NCBI nr
Match: KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (401), Expect = 9.61e-39
Identity = 140/408 (34.31%), Postives = 185/408 (45.34%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ PD SKI+ R WSSRE+M FA+L IR DLKDETY A FLS
Sbjct: 269 SYDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLS 328

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLRL +F++ASLM    IY   V +LANIYHGLGLITKA        
Sbjct: 329 CWLCLFVFPQKGSFLRLGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 388

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTG 180
           F FP            +H  H W             +V    + N   E  S    E+  
Sbjct: 389 FHFP------------MHYVHGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGEYEA 448

Query: 181 TPSFRTRINMN-------------------------AWLIIMIHCFCSLLIL*VCAPATY 240
                  + +                          ++ + M  C+ S          +Y
Sbjct: 449 RELIHNGVRIQWHANLHNRNKHERMVDTHDSSFLQMSYFVSMRSCYLSSRCENTWIITSY 508

Query: 241 HPTM--EMFGS*YHTVHIDLSSSL-AFTIISLMI*VA-CHLQSH*RIYYITI*KL--MGH 300
            P      FG  Y  +  D+     A T+ +++     C  ++     Y+ +  L    H
Sbjct: 509 SPYRFGRQFGF-YQDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPVRSLEPCKH 568

Query: 301 EARNLF*G**T---SFGKQCHSSLITTQTTQEPREQLEW*TDS-LG*SD-----GFYPRE 360
             +       T   ++ +     L+++      + +L     S LG  +        P  
Sbjct: 569 VTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNL 628

Query: 361 GSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSSAIGIPNVPPL 367
             E    E+DS+KSDRHWKR  KK  VSGD   GRG SA+ +P+VPPL
Sbjct: 629 EDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPL 663

[Close]

BLAST of Chy8G151310 vs. NCBI nr
Match: KAA0052363.1 (hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (399), Expect = 1.44e-38
Identity = 134/370 (36.22%), Postives = 164/370 (44.32%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ P+ SKI+ R WSSRE+M FA+L IR DLKDETY A FLS
Sbjct: 230 SYDKPTTRKQKKASRSKSTQNPNGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLS 289

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
           CWLCLFVF  KGSFLR  +F++ASLM    IY   V +LANIYHGLGLITKA        
Sbjct: 290 CWLCLFVFPQKGSFLRPGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 349

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFE--ISRWLTFSTKVGLFILENMRSEN*STKVQEF 180
           F FP            +H  H W K E  +    +   ++  F L N           + 
Sbjct: 350 FHFP------------MHYVHGWNKHERMVDTHDSSFLQMSYFDLPN-----------DI 409

Query: 181 TGTPSFRTRINMNAWLIIMIHCFCSLLIL*VCAPATYHPTMEMFGS*YHTVHIDLSSSLA 240
            G P   T  N+                        YH  +  + + + T   D    L 
Sbjct: 410 GGMPPAITLDNI-----------------------LYHWRIYWWTTKHGTYFEDNRHYLV 469

Query: 241 FTIISLMI*VACHLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQCHSSLITTQTTQE 300
            +        A    S  R+       L G E R                 L+       
Sbjct: 470 SS--------AIPRPSQPRLPKNRGSNLGGKEIR-----------------LV------- 506

Query: 301 PREQLEW*TDSLG*SDGFYPREGSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSS 360
                          +   P    E    E+DS+KSDRHWKR  KK  VSGD   GRG S
Sbjct: 530 ---------------EAMAPNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHPDGRGLS 506

Query: 361 AIGIPNVPPL 367
           A+ +P+VPPL
Sbjct: 590 ALEVPDVPPL 506

[Close]

BLAST of Chy8G151310 vs. NCBI nr
Match: KAA0050333.1 (hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (393), Expect = 4.13e-38
Identity = 133/370 (35.95%), Postives = 160/370 (43.24%), Query Frame = 0


Query: 1   SYDKPITQKQKKESHFKSTKKPDVSKIEPRGWSSRENMFFAKLRIRYDLKDETYFATFLS 60
           SYDKP T+KQKK S  KST+ PD SKI+   WSSRE+M FA+L +R DLKDETY A FLS
Sbjct: 117 SYDKPTTRKQKKASRSKSTQNPDGSKIQAHEWSSRESMLFAELGVRDDLKDETYLAAFLS 176

Query: 61  CWLCLFVFL*KGSFLRLEIFKIASLMVDRAIY-FVVLILANIYHGLGLITKA*IQ*DAWT 120
            WL LFVF  KGSFLR E+F++ASLM    IY   V +LANIYHGLGLITKA        
Sbjct: 177 YWLFLFVFPHKGSFLRPEVFRVASLMATGTIYSLAVPVLANIYHGLGLITKASNPIGRMD 236

Query: 121 FTFPCITSMTS*PIILVHITHFWQKFEISRWLTFSTKVGLFILENMRSEN*STKVQEFTG 180
           F FP            +H  H W            T+V    + N   E  S    E+  
Sbjct: 237 FHFP------------MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEA 296

Query: 181 TPSFRT--RINMNAWLIIMIHCFCSLLIL*VCAPATYHPTMEMFGS*YHTVHIDLSSSLA 240
                   RI  +A L                     +    M G+ +      L SS  
Sbjct: 297 RELIHNGARIQWHANL------------------QNRNKHERMHGTYFEDNRHHLVSS-- 356

Query: 241 FTIISLMI*VACHLQSH*RIYYITI*KLMGHEARNLF*G**TSFGKQCHSSLITTQTTQE 300
                     A    S  R+       L G E R +                +     +E
Sbjct: 357 ----------AIPPPSQPRLLKNRGSNLGGKEIRLV--------------EAMAPNLEEE 405

Query: 301 PREQLEW*TDSLG*SDGFYPREGSERAYDENDSSKSDRHWKRSSKKTNVSGDDSCGRGSS 360
            +E                          E+DSSKSDRHWKR  KK  VSGD   GRG S
Sbjct: 417 VKEH-------------------------ESDSSKSDRHWKRPLKKAKVSGDHPDGRGLS 405

Query: 361 AIGIPNVPPL 367
           A+ +P+VPPL
Sbjct: 477 ALEVPDVPPL 405

The following BLAST results are available for this feature:

BLAST of Chy8G151310 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G151310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C543	2.9e-37	36.14	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UVI5	4.2e-36	36.01	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7UGW6	1.6e-35	34.31	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7U8X8	8.0e-35	35.95	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7TZZ9	3.4e-33	34.77	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of Chy8G151310 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06278.1	1.68e-41	36.14	hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]	[more]
KAA0057575.1	7.19e-41	36.50	hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]	[more]
KAA0053466.1	9.61e-39	34.31	hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]	[more]
KAA0052363.1	1.44e-38	36.22	hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]	[more]
KAA0050333.1	4.13e-38	35.95	hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]	[more]

BLAST of Chy8G151310 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..330
None	No IPR available	PANTHER	PTHR36607:SF19	SUBFAMILY NOT NAMED	coord: 3..108
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 3..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G151310.1	Chy8G151310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane