Chy8G146690 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGTATGGCGGTTTGGGACCCAACATATCGAAAGAAGGAGACTTGGGTGTCTTTCTTTTCAACATTGAGTTCTGAAAATGTCATATGGAAGGCTCAATGAATGCCTTTGAAGGCAGTGATTTATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGATCATGATAAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTACAAGACTATGACTTTTCATATAATCTTGAAGACTATCAAGGAAAAAAACATCGAGCAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTAAGAAGGGGTTACTAGTGGATATGAGGCATGGCAGACAAATGGAAGGAAGAATGTAATATATACCTTAAGGGAGGTAGTTGAAAGGTAGAAGAGACGACCTCTGAACAACCGGACCAGTAGGTTGAGAAGACCATTAAATTAGAAAAGAAAAATCGATTGTTAGAGCAAGAGAATGAGAAACTTCGAAAGGAGACGAGCCAATGGATGGATCATGCGACTATTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAAAAATTAAGATAAGTTAGAAAAGAATCTTGAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCGAATAGAAGCTTGAAAAATGAAAAGACAATATTACAGAGAACAGTAGAATCGCAAGATGAATATATTAAAGATTTAGAAAGTAGGAAGGAATATTCTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGTAAACGGGAAGCACATATAGTAGATTTGGAAGTACACAATCATTCTCTATGCCAAACTGTTGATAGCCTACATGTGAAGATGGTTGAGCACTCTGAAGAGTATAAGATACTAAAAAATTATGCTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATAAGAATTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTTCAAGCATTAGTTGAACGTGTAGATCAAACAATTGGATTTCTCAGAATAGTGTCTAGAAGAGCAAATGGTTTTGCAGAATGGACAGCTGATTTATGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATCTGAATAGATTCTTAAAGATGATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAAGCTGTTTATTTTGCTATTA TTTGGTATGGCGGTTTGGGACCCAACATATCGAAAGAAGGAGACTTGGGTGTCTTTCTTTTCAACATTGAGTTCTGAAAATGTCATATGGAAGGCTCAATGAATGCCTTTGAAGGCAGTGATTTATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGATCATGATAAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTACAAGACTATGACTTTTCATATAATCTTGAAGACTATCAAGGAAAAAAACATCGAGCAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTAAGAAGGGGTTACTAGTGGATATGAGGCATGGCAGACAAATGGAAGGAAGAATGTAATATATACCTTAAGGGAGGTAGTTGAAAGGTAGAAGAGACGACCTCTGAACAACCGGACCAGTAGGTTGAGAAGACCATTAAATTAGAAAAGAAAAATCGATTGTTAGAGCAAGAGAATGAGAAACTTCGAAAGGAGACGAGCCAATGGATGGATCATGCGACTATTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAAAAATTAAGATAAGTTAGAAAAGAATCTTGAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCGAATAGAAGCTTGAAAAATGAAAAGACAATATTACAGAGAACAGTAGAATCGCAAGATGAATATATTAAAGATTTAGAAAGTAGGAAGGAATATTCTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGTAAACGGGAAGCACATATAGTAGATTTGGAAGTACACAATCATTCTCTATGCCAAACTGTTGATAGCCTACATGTGAAGATGGTTGAGCACTCTGAAGAGTATAAGATACTAAAAAATTATGCTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATAAGAATTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTTCAAGCATTAGTTGAACGTGTAGATCAAACAATTGGATTTCTCAGAATAGTGTCTAGAAGAGCAAATGGTTTTGCAGAATGGACAGCTGATTTATGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATCTGAATAGATTCTTAAAGATGATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAAGCTGTTTATTTTGCTATTA TTTGGTATGGCGGTTTGGGACCCAACATATCGAAAGAAGGAGACTTGGGTGTCTTTCTTTTCAACATTGAGTTCTGAAAATGTCATATGGAAGGCTCAATGAATGCCTTTGAAGGCAGTGATTTATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGATCATGATAAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTACAAGACTATGACTTTTCATATAATCTTGAAGACTATCAAGGAAAAAAACATCGAGCAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTAAGAAGGGGTTACTAGTGGATATGAGGCATGGCAGACAAATGGAAGGAAGAATGTAATATATACCTTAAGGGAGGTAGTTGAAAGGTAGAAGAGACGACCTCTGAACAACCGGACCAGTAGGTTGAGAAGACCATTAAATTAGAAAAGAAAAATCGATTGTTAGAGCAAGAGAATGAGAAACTTCGAAAGGAGACGAGCCAATGGATGGATCATGCGACTATTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAAAAATTAAGATAAGTTAGAAAAGAATCTTGAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCGAATAGAAGCTTGAAAAATGAAAAGACAATATTACAGAGAACAGTAGAATCGCAAGATGAATATATTAAAGATTTAGAAAGTAGGAAGGAATATTCTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGTAAACGGGAAGCACATATAGTAGATTTGGAAGTACACAATCATTCTCTATGCCAAACTGTTGATAGCCTACATGTGAAGATGGTTGAGCACTCTGAAGAGTATAAGATACTAAAAAATTATGCTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATAAGAATTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTTCAAGCATTAGTTGAACGTGTAGATCAAACAATTGGATTTCTCAGAATAGTGTCTAGAAGAGCAAATGGTTTTGCAGAATGGACAGCTGATTTATGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATCTGAATAGATTCTTAAAGATGATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAAGCTGTTTATTTTGCTATTA FGMAVWDPTYRKKETWVSFFSTLSSENVIWKAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYNLEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER*KRRPLNNRTSRLRRPLN*KRKIDC*SKRMRNFERRRANGWIMRLFCRKSLKRPRVS*KIKIS*KRILRC*IKR*GE*IKRIEA*KMKRQYYREQ*NRKMNILKI*KVGRNILSSLSMI*IHQLVNGKHI**IWKYTIILYAKLLIAYM*RWLSTLKSIRY*KIMLIPYTINLLHFKIQVRG*CKNKNY*RQITCK*RLIMICKGEIFKH*LNV*IKQLDFSE*CLEEQMVLQNGQLIYGLIFSQYNLMQMI*IDS*R*YAENLGILVVFIKLFILLL Homology
BLAST of Chy8G146690 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 4.2e-64 Identity = 118/144 (81.94%), Postives = 127/144 (88.19%), Query Frame = 0
BLAST of Chy8G146690 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 9.5e-64 Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Chy8G146690 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.3e-62 Identity = 117/145 (80.69%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Chy8G146690 vs. ExPASy TrEMBL
Match: A0A5A7UL51 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 5.7e-61 Identity = 115/147 (78.23%), Postives = 124/147 (84.35%), Query Frame = 0
BLAST of Chy8G146690 vs. ExPASy TrEMBL
Match: A0A5D3BYI1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00630 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60 Identity = 111/136 (81.62%), Postives = 120/136 (88.24%), Query Frame = 0
BLAST of Chy8G146690 vs. NCBI nr
Match: XP_031740432.1 (uncharacterized protein LOC116403430 [Cucumis sativus]) HSP 1 Score: 274 bits (701), Expect = 4.92e-85 Identity = 130/145 (89.66%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of Chy8G146690 vs. NCBI nr
Match: XP_031739496.1 (uncharacterized protein LOC116403043 [Cucumis sativus]) HSP 1 Score: 272 bits (695), Expect = 1.64e-84 Identity = 128/145 (88.28%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of Chy8G146690 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 253 bits (646), Expect = 5.29e-77 Identity = 118/145 (81.38%), Postives = 127/145 (87.59%), Query Frame = 0
BLAST of Chy8G146690 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 248 bits (634), Expect = 1.06e-76 Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 0
BLAST of Chy8G146690 vs. NCBI nr
Match: KAA0046902.1 (girdin-like [Cucumis melo var. makuwa] >TYK03246.1 girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 243 bits (619), Expect = 7.60e-75 Identity = 111/136 (81.62%), Postives = 120/136 (88.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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