Chy8G146680 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G146680
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Girdin-like
Location	chrH08: 1990158 .. 1991758 (+)
RNA-Seq Expression	Chy8G146680
Synteny	Chy8G146680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACTTACATTGATGAAGACAAAGGTCTTACTCTCTTGGCATTGTTCATTTATGGAGCAGTGATTTTTCCTAAAGCAGAAGATTATGTCGATGGAAAAGTGATCAGATTATTTTTTGAAATAAAATGAGGAGCCGGTCCTATTATACCTATATTGGCTAAAACTTTTCGATCCCTTAACTTCTGTAGAAATAAAGTGGCAGGAAAATTGAATTGTTGTGTTCGTTTATTATATATTTGGATAGACAACCATATCAAATTTTCGGTAGAGTTTAGGTGTCCAAGGTTAGAATTCAGTAGCCAATGGAACTTAATGCGAAACACAGTTAGTGAGTTTGGTATGGCGGTTTGGGACCCAACATATCGAAAGAAGGAGACTTGGGTGTCTTTCTTTTCAACATTGAGTTCTGAAAATGTCATATGGAAGGCTCAATGAATGCCTTTGAAGGCAGTGATTTATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGATCATGATAAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTACAAGACTATGACTTTTCATATAATCTTGAAGACTATCAAGGAAAAAAACATCGAGCAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTAAGAAGGGGTTACTAGTGGATATGAGGCATGGCAGACAAATGGAAGGAAGAATGTAATATATACCTTAAGGGAGGTAGTTGAAAGGTAGAAGAGACGACCTCTGAACAACCGGACCAGTAGGTTGAGAAGACCATTAAATTAGAAAAGAAAAATCGATTGTTAGAGCAAGAGAATGAGAAACTTCGAAAGGAGACGAGCCAATGGATGGATCATGCGACTATTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAAAAATTAAGATAAGTTAGAAAAGAATCTTGAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCGAATAGAAGCTTGAAAAATGAAAAGACAATATTACAGAGAACAGTAGAATCGCAAGATGAATATATTAAAGATTTAGAAAGTAGGAAGGAATATTCTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGTAAACGGGAAGCACATATAGTAGATTTGGAAGTACACAATCATTCTCTATGCCAAACTGTTGATAGCCTACATGTGAAGATGGTTGAGCACTCTGAAGAGTATAAGATACTAAAAAATTATGCTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATAAGAATTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTTCAAGCATTAGTTGAACGTGTAGATCAAACAATTGGATTTCTCAGAATAGTGTCTAGAAGAGCAAATGGTTTTGCAGAATGGACAGCTGATTTATGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATCTGAATAGATTCTTAAAGATGATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAAGCTGTTTATTTTGCTATTA

mRNA sequence

AAACTTACATTGATGAAGACAAAGGCTCAATGAATGCCTTTGAAGGCAGTGATTTATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGATCATGATAAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTACAAGACTATGACTTTTCATATAATCTTGAAGACTATCAAGGAAAAAAACATCGAGCAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTAAGAAGGGGTTACTAGTGGATATGAGGCATGGCAGACAAATGGAAGGAAGAATGTAATATATACCTTAAGGGAGGTAGTTGAAAGGTAGAAGAGACGACCTCTGAACAACCGGACCAGTAGGTTGAGAAGACCATTAAATTAGAAAAGAAAAATCGATTGTTAGAGCAAGAGAATGAGAAACTTCGAAAGGAGACGAGCCAATGGATGGATCATGCGACTATTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAAAAATTAAGATAAGTTAGAAAAGAATCTTGAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCGAATAGAAGCTTGAAAAATGAAAAGACAATATTACAGAGAACAGTAGAATCGCAAGATGAATATATTAAAGATTTAGAAAGTAGGAAGGAATATTCTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGTAAACGGGAAGCACATATAGTAGATTTGGAAGTACACAATCATTCTCTATGCCAAACTGTTGATAGCCTACATGTGAAGATGGTTGAGCACTCTGAAGAGTATAAGATACTAAAAAATTATGCTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATAAGAATTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTTCAAGCATTAGTTGAACGTGTAGATCAAACAATTGGATTTCTCAGAATAGTGTCTAGAAGAGCAAATGGTTTTGCAGAATGGACAGCTGATTTATGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATCTGAATAGATTCTTAAAGATGATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAAGCTGTTTATTTTGCTATTA

Coding sequence (CDS)

AAACTTACATTGATGAAGACAAAGGCTCAATGAATGCCTTTGAAGGCAGTGATTTATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGATCATGATAAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTACAAGACTATGACTTTTCATATAATCTTGAAGACTATCAAGGAAAAAAACATCGAGCAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTAAGAAGGGGTTACTAGTGGATATGAGGCATGGCAGACAAATGGAAGGAAGAATGTAATATATACCTTAAGGGAGGTAGTTGAAAGGTAGAAGAGACGACCTCTGAACAACCGGACCAGTAGGTTGAGAAGACCATTAAATTAGAAAAGAAAAATCGATTGTTAGAGCAAGAGAATGAGAAACTTCGAAAGGAGACGAGCCAATGGATGGATCATGCGACTATTTTGCAGAAAGAGCTTGAAAAGACCAAGAGTTTCTTAAAAAATTAAGATAAGTTAGAAAAGAATCTTGAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCGAATAGAAGCTTGAAAAATGAAAAGACAATATTACAGAGAACAGTAGAATCGCAAGATGAATATATTAAAGATTTAGAAAGTAGGAAGGAATATTCTCTCGAGCTTGTCAATGATTTGAATACATCAATTGGTAAACGGGAAGCACATATAGTAGATTTGGAAGTACACAATCATTCTCTATGCCAAACTGTTGATAGCCTACATGTGAAGATGGTTGAGCACTCTGAAGAGTATAAGATACTAAAAAATTATGCTGATTCCTTACACTATCAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATAAGAATTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAAGGAGAGATTTTCAAGCATTAGTTGAACGTGTAGATCAAACAATTGGATTTCTCAGAATAGTGTCTAGAAGAGCAAATGGTTTTGCAGAATGGACAGCTGATTTATGGATTAATTTTTTCTCAATACAACCTCATGCAGATGATCTGAATAGATTCTTAAAGATGATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAAGCTGTTTATTTTGCTATTA

Protein sequence

KLTLMKTKAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYNLEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER*KRRPLNNRTSRLRRPLN*KRKIDC*SKRMRNFERRRANGWIMRLFCRKSLKRPRVS*KIKIS*KRILRC*IKR*GE*IKRIEA*KMKRQYYREQ*NRKMNILKI*KVGRNILSSLSMI*IHQLVNGKHI**IWKYTIILYAKLLIAYM*RWLSTLKSIRY*KIMLIPYTINLLHFKIQVRG*CKNKNY*RQITCK*RLIMICKGEIFKH*LNV*IKQLDFSE*CLEEQMVLQNGQLIYGLIFSQYNLMQMI*IDS*R*YAENLGILVVFIKLFILLL

Homology

[Close]

BLAST of Chy8G146680 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.1e-48
Identity = 97/117 (82.91%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNYTPLLVLRQVWLKQFIPPTHNLQ+ DFSY+
Sbjct: 29  KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYD 88

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER*K 125
            ED QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVER K
Sbjct: 89  PEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGK 145

[Close]

BLAST of Chy8G146680 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.1e-48
Identity = 97/117 (82.91%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNYTPLLVLRQVWLKQFIPPTHNLQ+ DFSY+
Sbjct: 138 KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYD 197

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER*K 125
            ED QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVER K
Sbjct: 198 PEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGK 254

[Close]

BLAST of Chy8G146680 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.0e-48
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNYTPLLVLRQVWLKQFIPPTHNLQ+ DFSY+
Sbjct: 294 KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYD 353

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVE 122
            ED QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVE
Sbjct: 354 PEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVE 407

[Close]

BLAST of Chy8G146680 vs. ExPASy TrEMBL
Match: A0A5D3DK34 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 98/137 (71.53%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNY PLLVLRQVWLKQFIPPTHNLQ+ DFSY+
Sbjct: 71  KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYD 130

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER*KRRP 127
           LED QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVER K   
Sbjct: 131 LEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETS 190

Query: 128 LNNRTSRLRRPLN*KRK 145
                  +++ +  + K
Sbjct: 191 FEQPNQWIKKSIELEEK 207

[Close]

BLAST of Chy8G146680 vs. ExPASy TrEMBL
Match: A0A1S4DX26 (girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-46
Identity = 95/133 (71.43%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 12  MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYNLEDY 71
           MPLKAVIYRCGDFHSVPLLG   GVNY PLLVLRQVWLKQFIPPTHNLQ+ DFSY+LED 
Sbjct: 1   MPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYDLEDC 60

Query: 72  QGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER*KRRPLNNR 131
           QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVER K       
Sbjct: 61  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 120

Query: 132 TSRLRRPLN*KRK 145
              +++ +  + K
Sbjct: 121 NQWIKKSIELEEK 133

[Close]

BLAST of Chy8G146680 vs. NCBI nr
Match: XP_031740432.1 (uncharacterized protein LOC116403430 [Cucumis sativus])

HSP 1 Score: 216 bits (549), Expect = 1.26e-62
Identity = 103/115 (89.57%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNYTPLLVLRQVWLKQFIPPTHNLQD DF+Y+
Sbjct: 143 KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQDSDFAYD 202

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER 122
            ED Q KKHRAVCAWKSVRKIKDKGH EGVTSGYEAWQTN RKNVIYTLREVVER
Sbjct: 203 HEDCQRKKHRAVCAWKSVRKIKDKGHYEGVTSGYEAWQTNRRKNVIYTLREVVER 257

[Close]

BLAST of Chy8G146680 vs. NCBI nr
Match: XP_031739496.1 (uncharacterized protein LOC116403043 [Cucumis sativus])

HSP 1 Score: 213 bits (543), Expect = 4.48e-62
Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNYTPLLVLRQVWLKQFIPPTHNLQD DF+Y+
Sbjct: 144 KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQDSDFAYD 203

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER 122
            ED Q KKHRAVCAWKSVRKIKDKGH EGVTSGYEAWQTN RKNVIYTL++VVER
Sbjct: 204 HEDCQRKKHRAVCAWKSVRKIKDKGHYEGVTSGYEAWQTNRRKNVIYTLKDVVER 258

[Close]

BLAST of Chy8G146680 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (515), Expect = 3.73e-59
Identity = 96/115 (83.48%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNYTPLLVLRQVWLKQFIPPTHNLQ+ DFSY+
Sbjct: 29  KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYD 88

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER 122
            ED QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVER
Sbjct: 89  PEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVER 143

[Close]

BLAST of Chy8G146680 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (515), Expect = 9.06e-58
Identity = 96/115 (83.48%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNYTPLLVLRQVWLKQFIPPTHNLQ+ DFSY+
Sbjct: 138 KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYD 197

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER 122
            ED QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVER
Sbjct: 198 PEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVER 252

[Close]

BLAST of Chy8G146680 vs. NCBI nr
Match: TYK23955.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 203 bits (516), Expect = 9.70e-57
Identity = 96/115 (83.48%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 8   KAQ*MPLKAVIYRCGDFHSVPLLGS**GVNYTPLLVLRQVWLKQFIPPTHNLQDYDFSYN 67
           KAQ MPLKAVIYRCGDFHSVPLLG   GVNY PLLVLRQVWLKQFIPPTHNLQ+ DFSY+
Sbjct: 71  KAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYD 130

Query: 68  LEDYQGKKHRAVCAWKSVRKIKDKGH*EGVTSGYEAWQTNGRKNVIYTLREVVER 122
           LED QGKK +AVCAWKS+RKIKDKGH EGVTSGYEAWQ N RKN+I   REVVER
Sbjct: 131 LEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVER 185

The following BLAST results are available for this feature:

BLAST of Chy8G146680 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G146680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZ50	3.1e-48	82.91	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5A7TNJ1	3.1e-48	82.91	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]
A0A5A7T5S7	9.0e-48	83.33	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5D3DK34	1.2e-47	71.53	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE...	[more]
A0A1S4DX26	2.2e-46	71.43	girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1	[more]

BLAST of Chy8G146680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740432.1	1.26e-62	89.57	uncharacterized protein LOC116403430 [Cucumis sativus]	[more]
XP_031739496.1	4.48e-62	87.83	uncharacterized protein LOC116403043 [Cucumis sativus]	[more]
TYK16558.1	3.73e-59	83.48	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0044912.1	9.06e-58	83.48	girdin-like [Cucumis melo var. makuwa]	[more]
TYK23955.1	9.70e-57	83.48	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of Chy8G146680 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48180	FAMILY NOT NAMED	coord: 11..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G146680.1	Chy8G146680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding