Chy7G140960 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G140960
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	chrH07: 17371774 .. 17372648 (-)
RNA-Seq Expression	Chy7G140960
Synteny	Chy7G140960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCAACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACAGCAACAGCAGCAGCAACCGGCGCAAGAACGAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCGGTGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTCGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCATCTAAACGCCGTGACCGCCACCTCCGTTCCGACGGCCTTAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGTTAACAATTCTTCTTTTTCTTTTAATTTTGGCTACTTTTAACACAAAACCCTCAATTAATTCTTCTCTTTTTAATTTAGGGTTGGACATGGGGAATTTTCCGACGGAAGTGACCACACCGGCAGTGTTTCGGTGTGTACGAATGACAAGCTTGGACGAAACTGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCTCCCTCCTCCTCCTCCGCCGCATTGCTCGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAG

mRNA sequence

ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCAACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACAGCAACAGCAGCAGCAACCGGCGCAAGAACGAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCGGTGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTCGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCATCTAAACGCCGTGACCGCCACCTCCGTTCCGACGGCCTTAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGGGAATTTTCCGACGGAAGTGACCACACCGGCAGTGTTTCGGTGTGTACGAATGACAAGCTTGGACGAAACTGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCTCCCTCCTCCTCCTCCGCCGCATTGCTCGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAG

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCAACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACAGCAACAGCAGCAGCAACCGGCGCAAGAACGAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCGGTGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTCGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCATCTAAACGCCGTGACCGCCACCTCCGTTCCGACGGCCTTAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGGGAATTTTCCGACGGAAGTGACCACACCGGCAGTGTTTCGGTGTGTACGAATGACAAGCTTGGACGAAACTGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCTCCCTCCTCCTCCTCCGCCGCATTGCTCGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAG

Protein sequence

MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQQPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS*

Homology

[Close]

BLAST of Chy7G140960 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 5.7e-48
Identity = 140/373 (37.53%), Postives = 183/373 (49.06%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------- 60
           MAGFF LDGGG GG     +     +      P +E   WY+N                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -----YERLETWEGEEEQQ---QQQQPAQ------ERGGEG--------FVYSGDESPA- 120
                   LE W+   +Q+   Q QQ  Q         G G        F  SG+ S A 
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKST 180
               ++++M+RSG  GGG GG   SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+ST
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGG--VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRST 180

Query: 181 WVPASKRRDRHLRSDGLNSKR--------PKDTHYH-------------PTSSGLDMGNF 240
           WVPA+KRR+R  +   +  +         PK    +             P+ SGL++GNF
Sbjct: 181 WVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNF 240

Query: 241 PTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP------------- 265
           P EV++ AVFRCVR++S+++ ++++AYQTAV+IGGHIFKGILYD GP             
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

[Close]

BLAST of Chy7G140960 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.5e-45
Identity = 137/335 (40.90%), Postives = 177/335 (52.84%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE 60
           MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSG------TESWLWCRNPNSNADGGEAGPSYK 60

Query: 61  -RLETWEGEEEQQ---QQQQPAQERGGEGFVYSG-DESPARSSLVMVRSG-----RGGGG 120
             LE W+    Q+   QQQQ  Q+R       +G    P+  SL+    G     R G G
Sbjct: 61  GTLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSG 120

Query: 121 GGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG- 180
            GGP  SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G 
Sbjct: 121 SGGP--SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ 180

Query: 181 ----LNSKRPKDTHYH---------------PTSSGLDMGNFPTEVTTPAVFRCVRMTSL 240
               L    PK                      +SGL++GNFP EV++ AVFRCVR++S+
Sbjct: 181 QPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSV 240

Query: 241 DETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA----- 260
           D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Sbjct: 241 DDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSC 300

[Close]

BLAST of Chy7G140960 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.5e-43
Identity = 135/364 (37.09%), Postives = 175/364 (48.08%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPT-TEGLFWYKN--------------YE 60
           MA FF L     GG     H     +  + + PT +   F Y+N              Y+
Sbjct: 1   MANFFSL-----GGNQEQQH--QEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYK 60

Query: 61  RLETWEG-------EEEQQQQQQ------PAQE-----------RGGEGF-VYSGDESPA 120
             E W+         +  QQQQQ      P Q+               GF + +GD   +
Sbjct: 61  GFELWQSGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEAS 120

Query: 121 RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVP 180
           RS  VM+RSG GG        SCQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWVP
Sbjct: 121 RSGFVMMRSGGGG-------ISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVP 180

Query: 181 ASKRRDRHLRSDGL-----------NSKRPKDTHYHPTSS------------GLDMGNFP 240
           A+KRR+R  +   L           N+ + K     P++S            GL++G FP
Sbjct: 181 AAKRRERQQQLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFP 240

Query: 241 TEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQP--------PPP 264
           ++V T AVF+C++M+S+++ +DQ AYQ AV+IGGH+FKGILYD G E             
Sbjct: 241 SKVRTSAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDT 300

[Close]

BLAST of Chy7G140960 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.7e-39
Identity = 125/305 (40.98%), Postives = 155/305 (50.82%), Query Frame = 0


Query: 41  YKNYERLETWE----GEEEQQQQQQPAQERGGE------GFVYSGDES-----PARSSLV 100
           Y N +  E W      ++E QQQQQ  Q           G V SG  S      +RS   
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 101 MVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVP 160
            V S    GG      GG   +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVP
Sbjct: 105 NVVSDHEPGGFTVTRQGG--MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVP 164

Query: 161 ASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP--------------- 220
           A+KRR+R  +   L           N+KR +        D   H                
Sbjct: 165 AAKRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNA 224

Query: 221 -TSSGLDMG-NFPTEVTTPAVFRCVRMTSL--DETDDQYAYQTAVNIGGHIFKGILYDHG 265
            ++SGL++  + P EV +PA+FRCVR++S+  DE D  YAYQTAVNIGGHIFKGILYD G
Sbjct: 225 NSNSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQG 284

[Close]

BLAST of Chy7G140960 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-37
Identity = 82/155 (52.90%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 102 SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------- 161
           SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +           
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGG 152

Query: 162 -----SDGLNSKRPKDTHYHPT-------------SSGLDMG--NFPTEVTTPAVFRCVR 221
                + G  S  PK  H  PT             S+GL+MG  +FP EV++ A+FRCV+
Sbjct: 153 SGSGGAGGGGSSIPK-RHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVK 212

Query: 222 MTSLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE 225
           M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Sbjct: 213 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]

BLAST of Chy7G140960 vs. ExPASy TrEMBL
Match: A0A0A0KUG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 9.2e-150
Identity = 261/264 (98.86%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEG EEQQQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEG-EEQQQQQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           QPAQE+GGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDP 240
           TTPAVFRCVRMTSLDETDDQYAYQTAVNIGG IFKGILYDHGPEQPPPPPSSSSAALLDP
Sbjct: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPSSSSAALLDP 240

Query: 241 TPPYPTPLSTYITAGTQFFLPPSS 265
           TPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 TPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Chy7G140960 vs. ExPASy TrEMBL
Match: A0A5A7TNR6 (Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005220 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEE QQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           QPAQE+GGEGFVYSGDESPARSSLVMVRSGRGGG GGGPVTSCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLD 240
           TTPAVFRCVRMT+LDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS AALLD
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240

Query: 241 PTPPYPTPLSTYITAGTQFFLPPSS 265
            TPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 STPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Chy7G140960 vs. ExPASy TrEMBL
Match: A0A1S3CNX3 (protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEE QQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           QPAQE+GGEGFVYSGDESPARSSLVMVRSGRGGG GGGPVTSCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLD 240
           TTPAVFRCVRMT+LDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS AALLD
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240

Query: 241 PTPPYPTPLSTYITAGTQFFLPPSS 265
            TPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 STPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Chy7G140960 vs. ExPASy TrEMBL
Match: A0A6J1FUH1 (protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.1e-97
Identity = 193/289 (66.78%), Postives = 213/289 (73.70%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGFFPL     GGR PNYH PT TT       TT+GLFWY+NYE L  W        QQ
Sbjct: 1   MAGFFPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLGIW--------QQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           Q  Q++ GEGFVYSGDESP RSSLVM+RSGR    GGG V SCQDCGNQAKKDC+HMRCR
Sbjct: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+RHLRSDG N KRP+D      SSGL+M NFP EV
Sbjct: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMRNFPVEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQ----PPPPPSSS--- 240
           ++ AVFRCVRMT+LDET+DQ+AYQTAVNIGGH FKGILYDHGPEQ    PPPPP+S+   
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPD 240

Query: 241 ------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 265
                             SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 GGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of Chy7G140960 vs. ExPASy TrEMBL
Match: A0A6J1J480 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 9.1e-97
Identity = 192/288 (66.67%), Postives = 212/288 (73.61%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W        QQ
Sbjct: 1   MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           Q  Q++ GEGFVYSGDESP RSSLVM+RSGR    GGG V SCQDCGNQAKKDC+HMRCR
Sbjct: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+RHLRSD  N KRP+D      SSGL+MGNFP EV
Sbjct: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSS---- 240
           ++ AVFRCVRMT+LDET+DQ+AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+    
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDG 240

Query: 241 -----------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 265
                            SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 GALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of Chy7G140960 vs. NCBI nr
Match: XP_004146546.1 (protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >XP_031740725.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN53280.1 hypothetical protein Csa_015228 [Cucumis sativus])

HSP 1 Score: 541 bits (1394), Expect = 2.81e-194
Identity = 261/264 (98.86%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE QQQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE-QQQQQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           QPAQE+GGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDP 240
           TTPAVFRCVRMTSLDETDDQYAYQTAVNIGG IFKGILYDHGPEQPPPPPSSSSAALLDP
Sbjct: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPSSSSAALLDP 240

Query: 241 TPPYPTPLSTYITAGTQFFLPPSS 264
           TPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 TPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Chy7G140960 vs. NCBI nr
Match: XP_008465489.1 (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo] >KAA0044774.1 protein SHI RELATED SEQUENCE 1-like [Cucumis melo var. makuwa] >TYK16689.1 protein SHI RELATED SEQUENCE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 527 bits (1357), Expect = 1.33e-188
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEE QQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           QPAQE+GGEGFVYSGDESPARSSLVMVRSGRGGG GGGPVTSCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAA-LLD 240
           TTPAVFRCVRMT+LDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAA LLD
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240

Query: 241 PTPPYPTPLSTYITAGTQFFLPPSS 264
            TPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 STPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Chy7G140960 vs. NCBI nr
Match: XP_038881630.1 (protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 407 bits (1045), Expect = 4.61e-141
Identity = 215/279 (77.06%), Postives = 226/279 (81.00%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEE 60
           MAGFFPLDGGGS GR PNY FPT TT     GGEIIHPT +GLFWYKNYERLETWE   E
Sbjct: 1   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTTGGGEIIHPT-DGLFWYKNYERLETWE---E 60

Query: 61  QQQQQQPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCV 120
           QQQQQ    E+GGEGFVYSGDESPARSSLVMVRSGRG  G GG V SCQDCGNQAKKDCV
Sbjct: 61  QQQQQ----EQGGEGFVYSGDESPARSSLVMVRSGRG--GSGGQVMSCQDCGNQAKKDCV 120

Query: 121 HMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGN 180
           HMRCRTCCKSRGFECETHVKSTWVPASKRR+RHLR DG N KRPKD      SSGL+MG 
Sbjct: 121 HMRCRTCCKSRGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKDA----ASSGLEMGI 180

Query: 181 FPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---- 240
           FP EV++ AVFRCVRMT+LDET +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S    
Sbjct: 181 FPAEVSSTAVFRCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGPEQPPTSASPNGG 240

Query: 241 ------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS 264
                 + SA LLDP PPYPTPL+TYI AGTQFFLPP+S
Sbjct: 241 ALLITTAESATLLDPPPPYPTPLTTYIPAGTQFFLPPTS 265

[Close]

BLAST of Chy7G140960 vs. NCBI nr
Match: XP_038881624.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 407 bits (1045), Expect = 5.13e-141
Identity = 215/279 (77.06%), Postives = 226/279 (81.00%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEE 60
           MAGFFPLDGGGS GR PNY FPT TT     GGEIIHPT +GLFWYKNYERLETWE   E
Sbjct: 4   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTTGGGEIIHPT-DGLFWYKNYERLETWE---E 63

Query: 61  QQQQQQPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCV 120
           QQQQQ    E+GGEGFVYSGDESPARSSLVMVRSGRG  G GG V SCQDCGNQAKKDCV
Sbjct: 64  QQQQQ----EQGGEGFVYSGDESPARSSLVMVRSGRG--GSGGQVMSCQDCGNQAKKDCV 123

Query: 121 HMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGN 180
           HMRCRTCCKSRGFECETHVKSTWVPASKRR+RHLR DG N KRPKD      SSGL+MG 
Sbjct: 124 HMRCRTCCKSRGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKDA----ASSGLEMGI 183

Query: 181 FPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---- 240
           FP EV++ AVFRCVRMT+LDET +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S    
Sbjct: 184 FPAEVSSTAVFRCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGPEQPPTSASPNGG 243

Query: 241 ------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS 264
                 + SA LLDP PPYPTPL+TYI AGTQFFLPP+S
Sbjct: 244 ALLITTAESATLLDPPPPYPTPLTTYIPAGTQFFLPPTS 268

[Close]

BLAST of Chy7G140960 vs. NCBI nr
Match: KAG7031235.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371 bits (952), Expect = 7.08e-127
Identity = 194/290 (66.90%), Postives = 215/290 (74.14%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEQQQQQ 60
           MAGF+PL     GGR PNYH PT TT       TT+GLFWY+NYE LE W        QQ
Sbjct: 1   MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW--------QQ 60

Query: 61  QPAQERGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120
           Q  Q++ GEGFVYSGDESP RSSLVM+RSGR    GGG V SCQDCGNQAKKDC+HMRCR
Sbjct: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+RHLRSDG N KRP+D      SSGL+MGNFP EV
Sbjct: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNT--AASSGLEMGNFPVEV 180

Query: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPSSSS- 240
           ++ AVFRCVRMT+LDET+DQ+AYQTAVNIGGH FKGILYDHGPEQ     PPPPP+S+S 
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASP 240

Query: 241 --------------------AALLDPTPPYPTPLSTYITAGTQFFLPPSS 264
                               AALLDP PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 DGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 267

[Close]

BLAST of Chy7G140960 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 192.6 bits (488), Expect = 4.1e-49
Identity = 140/373 (37.53%), Postives = 183/373 (49.06%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------- 60
           MAGFF LDGGG GG     +     +      P +E   WY+N                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -----YERLETWEGEEEQQ---QQQQPAQ------ERGGEG--------FVYSGDESPA- 120
                   LE W+   +Q+   Q QQ  Q         G G        F  SG+ S A 
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKST 180
               ++++M+RSG  GGG GG   SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+ST
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGG--VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRST 180

Query: 181 WVPASKRRDRHLRSDGLNSKR--------PKDTHYH-------------PTSSGLDMGNF 240
           WVPA+KRR+R  +   +  +         PK    +             P+ SGL++GNF
Sbjct: 181 WVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNF 240

Query: 241 PTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP------------- 265
           P EV++ AVFRCVR++S+++ ++++AYQTAV+IGGHIFKGILYD GP             
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

[Close]

BLAST of Chy7G140960 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 183.0 bits (463), Expect = 3.2e-46
Identity = 137/335 (40.90%), Postives = 177/335 (52.84%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE 60
           MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSG------TESWLWCRNPNSNADGGEAGPSYK 60

Query: 61  -RLETWEGEEEQQ---QQQQPAQERGGEGFVYSG-DESPARSSLVMVRSG-----RGGGG 120
             LE W+    Q+   QQQQ  Q+R       +G    P+  SL+    G     R G G
Sbjct: 61  GTLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSG 120

Query: 121 GGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG- 180
            GGP  SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G 
Sbjct: 121 SGGP--SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ 180

Query: 181 ----LNSKRPKDTHYH---------------PTSSGLDMGNFPTEVTTPAVFRCVRMTSL 240
               L    PK                      +SGL++GNFP EV++ AVFRCVR++S+
Sbjct: 181 QPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSV 240

Query: 241 DETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA----- 260
           D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Sbjct: 241 DDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSC 300

[Close]

BLAST of Chy7G140960 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-40
Identity = 125/305 (40.98%), Postives = 155/305 (50.82%), Query Frame = 0


Query: 41  YKNYERLETWE----GEEEQQQQQQPAQERGGE------GFVYSGDES-----PARSSLV 100
           Y N +  E W      ++E QQQQQ  Q           G V SG  S      +RS   
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 101 MVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVP 160
            V S    GG      GG   +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVP
Sbjct: 105 NVVSDHEPGGFTVTRQGG--MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVP 164

Query: 161 ASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP--------------- 220
           A+KRR+R  +   L           N+KR +        D   H                
Sbjct: 165 AAKRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNA 224

Query: 221 -TSSGLDMG-NFPTEVTTPAVFRCVRMTSL--DETDDQYAYQTAVNIGGHIFKGILYDHG 265
            ++SGL++  + P EV +PA+FRCVR++S+  DE D  YAYQTAVNIGGHIFKGILYD G
Sbjct: 225 NSNSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQG 284

[Close]

BLAST of Chy7G140960 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-38
Identity = 82/155 (52.90%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 102 SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------- 161
           SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +           
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGG 152

Query: 162 -----SDGLNSKRPKDTHYHPT-------------SSGLDMG--NFPTEVTTPAVFRCVR 221
                + G  S  PK  H  PT             S+GL+MG  +FP EV++ A+FRCV+
Sbjct: 153 SGSGGAGGGGSSIPK-RHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVK 212

Query: 222 MTSLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE 225
           M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Sbjct: 213 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]

BLAST of Chy7G140960 vs. TAIR 10
Match: AT2G21400.1 (SHI-related sequence3 )

HSP 1 Score: 153.7 bits (387), Expect = 2.1e-37
Identity = 68/120 (56.67%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 103 CQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDT 162
           C+DCGNQAKKDCV+MRCRTCCKS+ F C+TH+KSTWVPA +R     +S  L++  PK  
Sbjct: 9   CEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRRSHHKHQSQPLSTSIPKGV 68

Query: 163 HYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHG 222
             H T      G+FP E+++ A FRCV+++S+D+  +QYAYQT VNIGGH+F+GIL+D G
Sbjct: 69  QIHTTP-----GHFPAELSSLADFRCVKVSSIDDGKEQYAYQTTVNIGGHVFRGILHDQG 123

The following BLAST results are available for this feature:

BLAST of Chy7G140960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	5.7e-48	37.53	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	4.5e-45	40.90	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	9.5e-43	37.09	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	3.7e-39	40.98	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
O65517	2.0e-37	52.90	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]

BLAST of Chy7G140960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUG2	9.2e-150	98.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1	[more]
A0A5A7TNR6	1.4e-145	96.23	Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CNX3	1.4e-145	96.23	protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3...	[more]
A0A6J1FUH1	3.1e-97	66.78	protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3...	[more]
A0A6J1J480	9.1e-97	66.67	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 ...	[more]

BLAST of Chy7G140960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146546.1	2.81e-194	98.86	protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >XP_031740725.1 protein SHI REL...	[more]
XP_008465489.1	1.33e-188	96.23	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo] >KAA0044774.1 prot...	[more]
XP_038881630.1	4.61e-141	77.06	protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]	[more]
XP_038881624.1	5.13e-141	77.06	protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]	[more]
KAG7031235.1	7.08e-127	66.90	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Chy7G140960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	4.1e-49	37.53	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	3.2e-46	40.90	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	2.6e-40	40.98	SHI-related sequence 5	[more]
AT4G36260.1	1.5e-38	52.90	Lateral root primordium (LRP) protein-related	[more]
AT2G21400.1	2.1e-37	56.67	SHI-related sequence3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 101..224 e-value: 1.0E-52 score: 178.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..165
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..225
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 176..223 e-value: 2.4E-25 score: 86.2
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 102..144 e-value: 8.4E-28 score: 94.0
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G140960.1	Chy7G140960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding