Chy7G138480 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G138480
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	VQ motif-containing protein 1-like
Location	chrH07: 14973905 .. 14974150 (+)
RNA-Seq Expression	Chy7G138480
Synteny	Chy7G138480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCACCTCATTCAACTAGGGTTGTGATTATTGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGACGGGCAAAGATTCGGTGGTGACAGTGGCTGAGGAAACCCGACGACAAACTGGTAGCGCCCAAAACTCGAGTCTTTTGAGAGATTCATCGTTCAAGGAGTTCCAAAGGGTGCTGAGAGAGATGCCAAGAATCGATGAGCTTTATTCTGATTGA

mRNA sequence

ATGGAAGCACCTCATTCAACTAGGGTTGTGATTATTGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGACGGGCAAAGATTCGGTGGTGACAGTGGCTGAGGAAACCCGACGACAAACTGGTAGCGCCCAAAACTCGAGTCTTTTGAGAGATTCATCGTTCAAGGAGTTCCAAAGGGTGCTGAGAGAGATGCCAAGAATCGATGAGCTTTATTCTGATTGA

Coding sequence (CDS)

ATGGAAGCACCTCATTCAACTAGGGTTGTGATTATTGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAAAAGCTGACGGGCAAAGATTCGGTGGTGACAGTGGCTGAGGAAACCCGACGACAAACTGGTAGCGCCCAAAACTCGAGTCTTTTGAGAGATTCATCGTTCAAGGAGTTCCAAAGGGTGCTGAGAGAGATGCCAAGAATCGATGAGCTTTATTCTGATTGA

Protein sequence

MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDSSFKEFQRVLREMPRIDELYSD*

Homology

[Close]

BLAST of Chy7G138480 vs. ExPASy Swiss-Prot
Match: Q8VYI5 (VQ motif-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=VQ10 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-07
Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0


Query: 8   RVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVT--------------------VAEETRRQ 67
           +VV I+T+YV+TDA+SFKTVVQ+LTGK+++V                     + E+TR+ 
Sbjct: 13  KVVFINTQYVETDARSFKTVVQELTGKNAIVAAGPFDSPSAFDGRCYDGGSKIGEDTRQL 72

Query: 68  TGSAQNSSLLRDSSFKEFQRVLREMPRIDELY 80
            G        R  +  EF R+ +EMP ++ELY
Sbjct: 73  HGGGGGGG--RMGTTTEFDRLFKEMPHMEELY 102

[Close]

BLAST of Chy7G138480 vs. ExPASy Swiss-Prot
Match: Q1G3U8 (VQ motif-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=VQ1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-06
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 8  RVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVA------------EETRRQTGSAQNSS 67
          +VV I+T+YVQTDA+SFKT+VQ+LTGK++VV               + ++R  G  + + 
Sbjct: 11 KVVFINTQYVQTDARSFKTIVQELTGKNAVVADGPYEFSGQGYGGKDSSQRFCGVGKEAE 70

Query: 68 LLRDSSFKEFQRVLREMPRIDELYS 81
            R     EF    REMP + ELY+
Sbjct: 71 --RGVETTEFDSFFREMPPVGELYN 93

[Close]

BLAST of Chy7G138480 vs. ExPASy TrEMBL
Match: A0A0A0KXJ0 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G075740 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.8e-34
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDS 60
          MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSA+NSSLLRDS
Sbjct: 1  MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSARNSSLLRDS 60

Query: 61 SFKEFQRVLREMPRIDELYSD 82
          SFKEFQRVLREMPRIDELYSD
Sbjct: 61 SFKEFQRVLREMPRIDELYSD 81

[Close]

BLAST of Chy7G138480 vs. ExPASy TrEMBL
Match: A0A5A7VBD1 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001280 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDS 60
          MEA HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVV V EE RRQTGSA+NSSLLRDS
Sbjct: 1  MEATHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVAVGEEIRRQTGSARNSSLLRDS 60

Query: 61 SFKEFQRVLREMPRIDELYSD 82
          SFKEFQRVLREMPRIDELYSD
Sbjct: 61 SFKEFQRVLREMPRIDELYSD 81

[Close]

BLAST of Chy7G138480 vs. ExPASy TrEMBL
Match: A0A6J1CNV7 (VQ motif-containing protein 10-like OS=Momordica charantia OX=3673 GN=LOC111012826 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.4e-16
Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 2  EAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDSS 61
          EAP STRVVIIDTKYV TDAKSFKTVVQKLTGKD      E+ R   G + +SSL RDSS
Sbjct: 5  EAP-STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLTRDSS 64

Query: 62 FKEFQRVLREMPR 75
          FKEFQRVLREM +
Sbjct: 65 FKEFQRVLREMAK 76

[Close]

BLAST of Chy7G138480 vs. ExPASy TrEMBL
Match: A0A6J1FVF7 (VQ motif-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447218 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.6e-14
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 5  HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDSSFKE 64
          HSTRVVIIDTKYV TDAKSFKTVVQKLTGKD  V   EE R+ +G   +  ++ DSSFK+
Sbjct: 7  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAV---EENRQTSGGWSSGLVITDSSFKK 66

Query: 65 FQRVLREMPRI 76
          FQ  LREMP I
Sbjct: 67 FQTELREMPTI 74

[Close]

BLAST of Chy7G138480 vs. ExPASy TrEMBL
Match: A0A0L9UJH2 (VQ domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g031100 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.6e-12
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 8  RVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVT--VAEETRRQTGSAQNSSLLRDSSFKEF 67
          +VVII+T+YV+TDA SFK+VVQKLTGKDS  +   A+  R   G  + S L+RD SFKEF
Sbjct: 12 KVVIINTQYVETDATSFKSVVQKLTGKDSDTSGPKAQRNRHDKGGTERSFLMRDLSFKEF 71

Query: 68 QRVLREMPRIDELYSD 82
           R+LREMP I++L+++
Sbjct: 72 DRLLREMPPINDLWAE 87

[Close]

BLAST of Chy7G138480 vs. NCBI nr
Match: KGN53544.1 (hypothetical protein Csa_014778 [Cucumis sativus])

HSP 1 Score: 154 bits (388), Expect = 7.78e-47
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDS 60
          MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSA+NSSLLRDS
Sbjct: 1  MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSARNSSLLRDS 60

Query: 61 SFKEFQRVLREMPRIDELYSD 81
          SFKEFQRVLREMPRIDELYSD
Sbjct: 61 SFKEFQRVLREMPRIDELYSD 81

[Close]

BLAST of Chy7G138480 vs. NCBI nr
Match: KAA0063001.1 (VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK16346.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (365), Expect = 2.52e-43
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDS 60
          MEA HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVV V EE RRQTGSA+NSSLLRDS
Sbjct: 1  MEATHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVAVGEEIRRQTGSARNSSLLRDS 60

Query: 61 SFKEFQRVLREMPRIDELYSD 81
          SFKEFQRVLREMPRIDELYSD
Sbjct: 61 SFKEFQRVLREMPRIDELYSD 81

[Close]

BLAST of Chy7G138480 vs. NCBI nr
Match: XP_038889427.1 (VQ motif-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 130 bits (326), Expect = 2.06e-37
Identity = 70/81 (86.42%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1  MEAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDS 60
          MEA HSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSV   AEE  R TG  +NS LLRDS
Sbjct: 1  MEAAHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSV---AEEENRHTGGTRNSGLLRDS 60

Query: 61 SFKEFQRVLREMPRIDELYSD 81
          SFKEFQRVLREMPRIDELYSD
Sbjct: 61 SFKEFQRVLREMPRIDELYSD 78

[Close]

BLAST of Chy7G138480 vs. NCBI nr
Match: KAG6577059.1 (VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015070.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107 bits (267), Expect = 1.69e-28
Identity = 62/74 (83.78%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 3  APHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDSSF 62
          A +STRVVIIDTKYVQTDAKSFKTVVQKLTGKD V   AEE R   G A+NSSLLRDSSF
Sbjct: 2  AAYSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPV---AEENRHGDG-ARNSSLLRDSSF 61

Query: 63 KEFQRVLREMPRID 76
          KEFQRVLREMPRID
Sbjct: 62 KEFQRVLREMPRID 71

[Close]

BLAST of Chy7G138480 vs. NCBI nr
Match: XP_022142787.1 (VQ motif-containing protein 10-like [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 2.13e-23
Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 2  EAPHSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVAEETRRQTGSAQNSSLLRDSS 61
          EAP STRVVIIDTKYV TDAKSFKTVVQKLTGKD      E+ R   G + +SSL RDSS
Sbjct: 5  EAP-STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLTRDSS 64

Query: 62 FKEFQRVLREMPR 74
          FKEFQRVLREM +
Sbjct: 65 FKEFQRVLREMAK 76

[Close]

BLAST of Chy7G138480 vs. TAIR 10
Match: AT1G78410.1 (VQ motif-containing protein )

HSP 1 Score: 57.0 bits (136), Expect = 8.3e-09
Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0


Query: 8   RVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVT--------------------VAEETRRQ 67
           +VV I+T+YV+TDA+SFKTVVQ+LTGK+++V                     + E+TR+ 
Sbjct: 13  KVVFINTQYVETDARSFKTVVQELTGKNAIVAAGPFDSPSAFDGRCYDGGSKIGEDTRQL 72

Query: 68  TGSAQNSSLLRDSSFKEFQRVLREMPRIDELY 80
            G        R  +  EF R+ +EMP ++ELY
Sbjct: 73  HGGGGGGG--RMGTTTEFDRLFKEMPHMEELY 102

[Close]

BLAST of Chy7G138480 vs. TAIR 10
Match: AT1G17147.1 (VQ motif-containing protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 8  RVVIIDTKYVQTDAKSFKTVVQKLTGKDSVVTVA------------EETRRQTGSAQNSS 67
          +VV I+T+YVQTDA+SFKT+VQ+LTGK++VV               + ++R  G  + + 
Sbjct: 11 KVVFINTQYVQTDARSFKTIVQELTGKNAVVADGPYEFSGQGYGGKDSSQRFCGVGKEAE 70

Query: 68 LLRDSSFKEFQRVLREMPRIDELYS 81
            R     EF    REMP + ELY+
Sbjct: 71 --RGVETTEFDSFFREMPPVGELYN 93

The following BLAST results are available for this feature:

BLAST of Chy7G138480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYI5	1.2e-07	38.04	VQ motif-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=VQ10 PE=1 SV=1	[more]
Q1G3U8	1.7e-06	40.00	VQ motif-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=VQ1 PE=1 SV=1	[more]

BLAST of Chy7G138480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXJ0	5.8e-34	98.77	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G075740 PE=4 SV=...	[more]
A0A5A7VBD1	2.7e-31	93.83	VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CNV7	5.4e-16	72.60	VQ motif-containing protein 10-like OS=Momordica charantia OX=3673 GN=LOC1110128...	[more]
A0A6J1FVF7	8.6e-14	67.61	VQ motif-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447218 PE=4...	[more]
A0A0L9UJH2	3.6e-12	56.58	VQ domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g0311...	[more]

BLAST of Chy7G138480 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53544.1	7.78e-47	98.77	hypothetical protein Csa_014778 [Cucumis sativus]	[more]
KAA0063001.1	2.52e-43	93.83	VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK16346.1 VQ mot...	[more]
XP_038889427.1	2.06e-37	86.42	VQ motif-containing protein 1-like [Benincasa hispida]	[more]
KAG6577059.1	1.69e-28	83.78	VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_022142787.1	2.13e-23	72.60	VQ motif-containing protein 10-like [Momordica charantia]	[more]

BLAST of Chy7G138480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78410.1	8.3e-09	38.04	VQ motif-containing protein	[more]
AT1G17147.1	1.2e-07	40.00	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 11..36 e-value: 1.9E-11 score: 43.2
None	No IPR available	PANTHER	PTHR34777:SF1	VQ MOTIF-CONTAINING PROTEIN 10	coord: 5..80
IPR039608	VQ motif-containing protein 1/10	PANTHER	PTHR34777	VQ MOTIF-CONTAINING PROTEIN 10	coord: 5..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G138480.1	Chy7G138480.1	mRNA