Chy7G136760 (gene) Cucumber (hystrix) v1

Overview


Name	Chy7G136760
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Nuclear pore complex protein NUP98A-like
Location	chrH07: 11001781 .. 11002704 (-)
RNA-Seq Expression	Chy7G136760
Synteny	Chy7G136760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATTGCCTGTGAGAAAATATAACCCTAAGAATGATGGCAGTCCAAGGGTTCCATTTTTCAGTGATGATGAAGAAACACCAAGCACTCCAAAAGCCGATGCTCTTTTTATTCCCAGAGAGAATCCTAGAGCATTGGTTATTCGTCCCACGGATCAGTGGCCTTCAAAAGCCAATTTAGATAAAAGTTTGCCATCGAAGGACACCTCAGTGCGTGAAAATGGGAAGGTTGCTGAACGTACTTCCTCGGCCATCAACAATTTGAAGGATACCAATGGAAATGTTGTTGACAATGGTATTAGCAAAGAGAACATCCATCTCAACAAAGTTAACCAAAAACCGAATGGGGTCCATGAGGATCACTCTGCTCCAAAGGAGGACTTGTATAGGACATTTGCAGGGCACAGAGCTGGTGAGGCTGCCATTGTTTATGAACATGGGGCAGATATGAGGGATTAATGCCAAAGCTTCTGCATTCGGACTATTATACCAAGCCAAAGATTCAAGAATTAGCAGCCAAAGAAAGGGCCGAACCTGGGTTTTGTCGCCATGTTAAAGATTTTGTGGTGGGTCGCCATGGTTATGGAAGCATCAAATTCTTGGGTGAAACAGACGTGCGAAGGCTTGATCTAGAGTCCATTGTTCAGTTTAACAATCGTGAGGTGATTGTCTACCTTGATGAGAGTAAAAACCCTCTTTGTGGGCAAGGTCTGAATAAGCCTGATACTCAACATCAAATGTGTAGACAAGCAAACTGGGCATCAACAAGGGCCTAAAGTTGAGAAGTACAAGGAGTTGCTAAGGAAGAAGACAGAGGCTCAAGGCGCCGAGTTCGTATCATACGATCGGGAGTGGAAATTCAGGGTTGAACACTTCAGCAGGTATAATATGGAAGATAATGAAGAAGTTGAAGATTGGGAATGA

mRNA sequence

ATGAGATTGCCTGTGAGAAAATATAACCCTAAGAATGATGGCAGTCCAAGGGTTCCATTTTTCAGTGATGATGAAGAAACACCAAGCACTCCAAAAGCCGATGCTCTTTTTATTCCCAGAGAGAATCCTAGAGCATTGGTTATTCGTCCCACGGATCAGTGGCCTTCAAAAGCCAATTTAGATAAAAGTTTGCCATCGAAGGACACCTCAGTGCGTGAAAATGGGAAGGTTGCTGAACGTACTTCCTCGGCCATCAACAATTTGAAGGATACCAATGGAAATGTTGTTGACAATGGTATTAGCAAAGAGAACATCCATCTCAACAAAGTTAACCAAAAACCGAATGGGGTCCATGAGGATCACTCTGCTCCAAAGGAGGACTTGTATAGGACATTTGCAGGGCACAGAGCTGACAAGCAAACTGGGCATCAACAAGGGCCTAAAGTTGAGAAGTACAAGGAGTTGCTAAGGAAGAAGACAGAGGCTCAAGGCGCCGAGTTCGTATCATACGATCGGGAGTGGAAATTCAGGGTTGAACACTTCAGCAGGTATAATATGGAAGATAATGAAGAAGTTGAAGATTGGGAATGA

Coding sequence (CDS)

ATGAGATTGCCTGTGAGAAAATATAACCCTAAGAATGATGGCAGTCCAAGGGTTCCATTTTTCAGTGATGATGAAGAAACACCAAGCACTCCAAAAGCCGATGCTCTTTTTATTCCCAGAGAGAATCCTAGAGCATTGGTTATTCGTCCCACGGATCAGTGGCCTTCAAAAGCCAATTTAGATAAAAGTTTGCCATCGAAGGACACCTCAGTGCGTGAAAATGGGAAGGTTGCTGAACGTACTTCCTCGGCCATCAACAATTTGAAGGATACCAATGGAAATGTTGTTGACAATGGTATTAGCAAAGAGAACATCCATCTCAACAAAGTTAACCAAAAACCGAATGGGGTCCATGAGGATCACTCTGCTCCAAAGGAGGACTTGTATAGGACATTTGCAGGGCACAGAGCTGACAAGCAAACTGGGCATCAACAAGGGCCTAAAGTTGAGAAGTACAAGGAGTTGCTAAGGAAGAAGACAGAGGCTCAAGGCGCCGAGTTCGTATCATACGATCGGGAGTGGAAATTCAGGGTTGAACACTTCAGCAGGTATAATATGGAAGATAATGAAGAAGTTGAAGATTGGGAATGA

Protein sequence

MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANLDKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHEDHSAPKEDLYRTFAGHRADKQTGHQQGPKVEKYKELLRKKTEAQGAEFVSYDREWKFRVEHFSRYNMEDNEEVEDWE*

Homology

[Close]

BLAST of Chy7G136760 vs. ExPASy Swiss-Prot
Match: Q8RY25 (Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana OX=3702 GN=NUP98A PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.2e-31
Identity = 109/317 (34.38%), Postives = 139/317 (43.85%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            +RLP RKY P  +G P+VPFF+DDEE+ STPKADALFIPRENPRALVIRP  QW S+   
Sbjct: 728  VRLPARKYRPGENG-PKVPFFTDDEESSSTPKADALFIPRENPRALVIRPVQQWSSR--- 787

Query: 61   DKSLPSKD----TSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLN-KVNQKPN 120
            DKS+  K+      + +NGK  +  + A N+ ++ NG +   G + E IH +   NQKPN
Sbjct: 788  DKSILPKEQRPTAPLHDNGKSPDMATDAANHDRNGNGEL---GATGERIHTSVNANQKPN 847

Query: 121  G-VHEDHSAPKEDLYRTFAGHRA------------------------------------- 180
            G    D ++ KE  Y+T +GHRA                                     
Sbjct: 848  GTTRSDQASEKERPYKTLSGHRAGEAAIVYEHGADIEALMPKLRQSDYFTEPRIQELAAK 907

Query: 181  ------------------------------------------------------------ 192
                                                                        
Sbjct: 908  ERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNTREVIVYMDESKKPAV 967

[Close]

BLAST of Chy7G136760 vs. ExPASy Swiss-Prot
Match: F4ID16 (Nuclear pore complex protein NUP98B OS=Arabidopsis thaliana OX=3702 GN=NUP98B PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.6e-24
Identity = 96/299 (32.11%), Postives = 126/299 (42.14%), Query Frame = 0


Query: 1   MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
           +RLP RKY P +DG P+VPFFSD+EE  STPKADA FIPRENPRAL IRP ++  S+   
Sbjct: 712 VRLPTRKYRPSDDG-PKVPFFSDEEENSSTPKADAFFIPRENPRALFIRPVERVKSEHPK 771

Query: 61  DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
           D   P     ++ENGK     S+ + N    N    DNG  +E   + KVNQK NG HE+
Sbjct: 772 DSPTP-----LQENGK----RSNGVTN--GANHETKDNGAIREAPPV-KVNQKQNGTHEN 831

Query: 121 HSAPKEDLYRTFAG----------HRA--------------------------------- 180
           H   K   + + +G          H +                                 
Sbjct: 832 HGGDKNGSHSSPSGADIESLMPKLHHSEYFTEPRIQELAAKERVEQGYCKRVKDFVVGRH 891

Query: 181 -----------------------------------------------------------D 193
                                                                      D
Sbjct: 892 GYGSIKFLGETDVCRLDLEMVVQFKNREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMD 951

[Close]

BLAST of Chy7G136760 vs. ExPASy TrEMBL
Match: A0A0A0LN95 (Peptidase S59 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G433410 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 187/316 (59.18%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSK NL
Sbjct: 722  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKGNL 781

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGKVAERTSSA+NNLKDTNGNVV+NG SKENIHLN+VNQKPNGVHED
Sbjct: 782  DKSLPSKDTSVRENGKVAERTSSAVNNLKDTNGNVVENGTSKENIHLNEVNQKPNGVHED 841

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKEDLYRTFAGHRA                                           
Sbjct: 842  HSAPKEDLYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 901

Query: 181  ------------------------------------------------------------ 197
                                                                        
Sbjct: 902  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 961

[Close]

BLAST of Chy7G136760 vs. ExPASy TrEMBL
Match: A0A1S4E3X5 (nuclear pore complex protein NUP98A-like OS=Cucumis melo OX=3656 GN=LOC103501063 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 184/316 (58.23%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL
Sbjct: 730  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 789

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGK+AERTSSA+NNLKDTNGNVV+NGI+KE+IHLNKVNQKPNGVHED
Sbjct: 790  DKSLPSKDTSVRENGKIAERTSSAVNNLKDTNGNVVENGINKESIHLNKVNQKPNGVHED 849

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKE+LYRTFAGHRA                                           
Sbjct: 850  HSAPKEELYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 909

Query: 181  ------------------------------------------------------------ 197
                                                                        
Sbjct: 910  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 969

[Close]

BLAST of Chy7G136760 vs. ExPASy TrEMBL
Match: A0A5D3BU65 (Nuclear pore complex protein NUP98A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38G00080 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 184/316 (58.23%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL
Sbjct: 730  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 789

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGK+AERTSSA+NNLKDTNGNVV+NGI+KE+IHLNKVNQKPNGVHED
Sbjct: 790  DKSLPSKDTSVRENGKIAERTSSAVNNLKDTNGNVVENGINKESIHLNKVNQKPNGVHED 849

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKE+LYRTFAGHRA                                           
Sbjct: 850  HSAPKEELYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 909

Query: 181  ------------------------------------------------------------ 197
                                                                        
Sbjct: 910  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 969

[Close]

BLAST of Chy7G136760 vs. ExPASy TrEMBL
Match: A0A5A7TMM6 (Nuclear pore complex protein NUP98A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001300 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 184/316 (58.23%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL
Sbjct: 722  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 781

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGK+AERTSSA+NNLKDTNGNVV+NGI+KE+IHLNKVNQKPNGVHED
Sbjct: 782  DKSLPSKDTSVRENGKIAERTSSAVNNLKDTNGNVVENGINKESIHLNKVNQKPNGVHED 841

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKE+LYRTFAGHRA                                           
Sbjct: 842  HSAPKEELYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 901

Query: 181  ------------------------------------------------------------ 197
                                                                        
Sbjct: 902  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 961

[Close]

BLAST of Chy7G136760 vs. ExPASy TrEMBL
Match: A0A6J1H1L4 (nuclear pore complex protein NUP98A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459600 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.9e-77
Identity = 175/317 (55.21%), Postives = 187/317 (58.99%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLP RKYNPKNDG PRVPFFS+DEETPSTPKADALFIPRENPRALVIRPTDQWPS+A+ 
Sbjct: 725  MRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALFIPRENPRALVIRPTDQWPSRASS 784

Query: 61   DKSLPSKDTSVRENGKVAERTSS-AINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHE 120
            ++ LPSKDTSVRENGK+AE TSS A+NNLKDTNGNVV+NG SK+NIH NKVNQKPNGVHE
Sbjct: 785  ERVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVVENGTSKDNIHPNKVNQKPNGVHE 844

Query: 121  DHSAPKEDLYRTFAGHRA------------------------------------------ 180
            DHSAPKEDLYRTF GHRA                                          
Sbjct: 845  DHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKMQELAAKERAEP 904

Query: 181  ------------------------------------------------------------ 197
                                                                        
Sbjct: 905  GFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPRGQGLN 964

[Close]

BLAST of Chy7G136760 vs. NCBI nr
Match: XP_011650063.2 (nuclear pore complex protein NUP98A [Cucumis sativus] >KAE8652350.1 hypothetical protein Csa_022207 [Cucumis sativus])

HSP 1 Score: 327 bits (839), Expect = 3.13e-102
Identity = 189/316 (59.81%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSK NL
Sbjct: 730  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKGNL 789

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGKVAERTSSA+NNLKDTNGNVV+NG SKENIHLNKVNQKPNGVHED
Sbjct: 790  DKSLPSKDTSVRENGKVAERTSSAVNNLKDTNGNVVENGTSKENIHLNKVNQKPNGVHED 849

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKEDLYRTFAGHRA                                           
Sbjct: 850  HSAPKEDLYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 909

Query: 181  ------------------------------------------------------------ 196
                                                                        
Sbjct: 910  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 969

[Close]

BLAST of Chy7G136760 vs. NCBI nr
Match: XP_038902900.1 (nuclear pore complex protein NUP98A [Benincasa hispida] >XP_038902901.1 nuclear pore complex protein NUP98A [Benincasa hispida])

HSP 1 Score: 322 bits (825), Expect = 2.05e-100
Identity = 185/316 (58.54%), Postives = 192/316 (60.76%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL
Sbjct: 698  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 757

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDT+VRENGK+AE TSSA+N LKDTNGNVV+NG SK+NIHLNKVNQKPNGVHED
Sbjct: 758  DKSLPSKDTTVRENGKIAEHTSSAVNKLKDTNGNVVENGTSKDNIHLNKVNQKPNGVHED 817

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKEDLYRTFAGHRA                                           
Sbjct: 818  HSAPKEDLYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 877

Query: 181  ------------------------------------------------------------ 196
                                                                        
Sbjct: 878  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 937

[Close]

BLAST of Chy7G136760 vs. NCBI nr
Match: KAA0043047.1 (nuclear pore complex protein NUP98A-like [Cucumis melo var. makuwa])

HSP 1 Score: 317 bits (812), Expect = 2.23e-98
Identity = 184/316 (58.23%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL
Sbjct: 722  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 781

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGK+AERTSSA+NNLKDTNGNVV+NGI+KE+IHLNKVNQKPNGVHED
Sbjct: 782  DKSLPSKDTSVRENGKIAERTSSAVNNLKDTNGNVVENGINKESIHLNKVNQKPNGVHED 841

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKE+LYRTFAGHRA                                           
Sbjct: 842  HSAPKEELYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 901

Query: 181  ------------------------------------------------------------ 196
                                                                        
Sbjct: 902  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 961

[Close]

BLAST of Chy7G136760 vs. NCBI nr
Match: TYK01639.1 (nuclear pore complex protein NUP98A-like [Cucumis melo var. makuwa])

HSP 1 Score: 317 bits (812), Expect = 2.51e-98
Identity = 184/316 (58.23%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL
Sbjct: 730  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 789

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGK+AERTSSA+NNLKDTNGNVV+NGI+KE+IHLNKVNQKPNGVHED
Sbjct: 790  DKSLPSKDTSVRENGKIAERTSSAVNNLKDTNGNVVENGINKESIHLNKVNQKPNGVHED 849

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKE+LYRTFAGHRA                                           
Sbjct: 850  HSAPKEELYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 909

Query: 181  ------------------------------------------------------------ 196
                                                                        
Sbjct: 910  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 969

[Close]

BLAST of Chy7G136760 vs. NCBI nr
Match: XP_008462776.1 (PREDICTED: nuclear pore complex protein NUP98A-like [Cucumis melo] >XP_016902936.1 PREDICTED: nuclear pore complex protein NUP98A-like [Cucumis melo])

HSP 1 Score: 317 bits (812), Expect = 2.51e-98
Identity = 184/316 (58.23%), Postives = 193/316 (61.08%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL
Sbjct: 730  MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 789

Query: 61   DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
            DKSLPSKDTSVRENGK+AERTSSA+NNLKDTNGNVV+NGI+KE+IHLNKVNQKPNGVHED
Sbjct: 790  DKSLPSKDTSVRENGKIAERTSSAVNNLKDTNGNVVENGINKESIHLNKVNQKPNGVHED 849

Query: 121  HSAPKEDLYRTFAGHRA------------------------------------------- 180
            HSAPKE+LYRTFAGHRA                                           
Sbjct: 850  HSAPKEELYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPG 909

Query: 181  ------------------------------------------------------------ 196
                                                                        
Sbjct: 910  FCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNK 969

[Close]

BLAST of Chy7G136760 vs. TAIR 10
Match: AT1G10390.1 (Nucleoporin autopeptidase )

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-32
Identity = 109/317 (34.38%), Postives = 139/317 (43.85%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            +RLP RKY P  +G P+VPFF+DDEE+ STPKADALFIPRENPRALVIRP  QW S+   
Sbjct: 728  VRLPARKYRPGENG-PKVPFFTDDEESSSTPKADALFIPRENPRALVIRPVQQWSSR--- 787

Query: 61   DKSLPSKD----TSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLN-KVNQKPN 120
            DKS+  K+      + +NGK  +  + A N+ ++ NG +   G + E IH +   NQKPN
Sbjct: 788  DKSILPKEQRPTAPLHDNGKSPDMATDAANHDRNGNGEL---GATGERIHTSVNANQKPN 847

Query: 121  G-VHEDHSAPKEDLYRTFAGHRA------------------------------------- 180
            G    D ++ KE  Y+T +GHRA                                     
Sbjct: 848  GTTRSDQASEKERPYKTLSGHRAGEAAIVYEHGADIEALMPKLRQSDYFTEPRIQELAAK 907

Query: 181  ------------------------------------------------------------ 192
                                                                        
Sbjct: 908  ERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNTREVIVYMDESKKPAV 967

[Close]

BLAST of Chy7G136760 vs. TAIR 10
Match: AT1G10390.2 (Nucleoporin autopeptidase )

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-32
Identity = 109/317 (34.38%), Postives = 139/317 (43.85%), Query Frame = 0


Query: 1    MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
            +RLP RKY P  +G P+VPFF+DDEE+ STPKADALFIPRENPRALVIRP  QW S+   
Sbjct: 728  VRLPARKYRPGENG-PKVPFFTDDEESSSTPKADALFIPRENPRALVIRPVQQWSSR--- 787

Query: 61   DKSLPSKD----TSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLN-KVNQKPN 120
            DKS+  K+      + +NGK  +  + A N+ ++ NG +   G + E IH +   NQKPN
Sbjct: 788  DKSILPKEQRPTAPLHDNGKSPDMATDAANHDRNGNGEL---GATGERIHTSVNANQKPN 847

Query: 121  G-VHEDHSAPKEDLYRTFAGHRA------------------------------------- 180
            G    D ++ KE  Y+T +GHRA                                     
Sbjct: 848  GTTRSDQASEKERPYKTLSGHRAGEAAIVYEHGADIEALMPKLRQSDYFTEPRIQELAAK 907

Query: 181  ------------------------------------------------------------ 192
                                                                        
Sbjct: 908  ERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNTREVIVYMDESKKPAV 967

[Close]

BLAST of Chy7G136760 vs. TAIR 10
Match: AT1G59660.1 (Nucleoporin autopeptidase )

HSP 1 Score: 111.7 bits (278), Expect = 6.8e-25
Identity = 96/299 (32.11%), Postives = 126/299 (42.14%), Query Frame = 0


Query: 1   MRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKANL 60
           +RLP RKY P +DG P+VPFFSD+EE  STPKADA FIPRENPRAL IRP ++  S+   
Sbjct: 712 VRLPTRKYRPSDDG-PKVPFFSDEEENSSTPKADAFFIPRENPRALFIRPVERVKSEHPK 771

Query: 61  DKSLPSKDTSVRENGKVAERTSSAINNLKDTNGNVVDNGISKENIHLNKVNQKPNGVHED 120
           D   P     ++ENGK     S+ + N    N    DNG  +E   + KVNQK NG HE+
Sbjct: 772 DSPTP-----LQENGK----RSNGVTN--GANHETKDNGAIREAPPV-KVNQKQNGTHEN 831

Query: 121 HSAPKEDLYRTFAG----------HRA--------------------------------- 180
           H   K   + + +G          H +                                 
Sbjct: 832 HGGDKNGSHSSPSGADIESLMPKLHHSEYFTEPRIQELAAKERVEQGYCKRVKDFVVGRH 891

Query: 181 -----------------------------------------------------------D 193
                                                                      D
Sbjct: 892 GYGSIKFLGETDVCRLDLEMVVQFKNREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMD 951

The following BLAST results are available for this feature:

BLAST of Chy7G136760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RY25	6.2e-31	34.38	Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana OX=3702 GN=NUP98A PE...	[more]
F4ID16	9.6e-24	32.11	Nuclear pore complex protein NUP98B OS=Arabidopsis thaliana OX=3702 GN=NUP98B PE...	[more]

BLAST of Chy7G136760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN95	1.0e-84	59.18	Peptidase S59 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G4334...	[more]
A0A1S4E3X5	1.2e-82	58.23	nuclear pore complex protein NUP98A-like OS=Cucumis melo OX=3656 GN=LOC103501063...	[more]
A0A5D3BU65	1.2e-82	58.23	Nuclear pore complex protein NUP98A-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TMM6	1.2e-82	58.23	Nuclear pore complex protein NUP98A-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1H1L4	5.9e-77	55.21	nuclear pore complex protein NUP98A-like isoform X1 OS=Cucurbita moschata OX=366...	[more]

BLAST of Chy7G136760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650063.2	3.13e-102	59.81	nuclear pore complex protein NUP98A [Cucumis sativus] >KAE8652350.1 hypothetical...	[more]
XP_038902900.1	2.05e-100	58.54	nuclear pore complex protein NUP98A [Benincasa hispida] >XP_038902901.1 nuclear ...	[more]
KAA0043047.1	2.23e-98	58.23	nuclear pore complex protein NUP98A-like [Cucumis melo var. makuwa]	[more]
TYK01639.1	2.51e-98	58.23	nuclear pore complex protein NUP98A-like [Cucumis melo var. makuwa]	[more]
XP_008462776.1	2.51e-98	58.23	PREDICTED: nuclear pore complex protein NUP98A-like [Cucumis melo] >XP_016902936...	[more]

BLAST of Chy7G136760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10390.1	4.4e-32	34.38	Nucleoporin autopeptidase	[more]
AT1G10390.2	4.4e-32	34.38	Nucleoporin autopeptidase	[more]
AT1G59660.1	6.8e-25	32.11	Nucleoporin autopeptidase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007230	Peptidase S59, nucleoporin	PFAM	PF04096	Nucleoporin2	coord: 137..186 e-value: 3.1E-8 score: 33.9
IPR036903	Peptidase S59, nucleoporin superfamily	GENE3D	3.30.1610.10	Peptidase S59, nucleoporin	coord: 104..188 e-value: 2.5E-10 score: 42.3
IPR036903	Peptidase S59, nucleoporin superfamily	SUPERFAMILY	82215	C-terminal autoproteolytic domain of nucleoporin nup98	coord: 138..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..99
None	No IPR available	PANTHER	PTHR23198:SF22	BNAC05G07920D PROTEIN	coord: 17..139 coord: 138..191
IPR037665	Nucleoporin peptidase S59-like	PANTHER	PTHR23198	NUCLEOPORIN	coord: 17..139 coord: 138..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy7G136760.1	Chy7G136760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0071705	nitrogen compound transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0071702	organic substance transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0017056	structural constituent of nuclear pore