Chy6G127940 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G127940
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ganglioside-induced differentiation-associated protein 2
Location	chrH06: 26630898 .. 26632618 (+)
RNA-Seq Expression	Chy6G127940
Synteny	Chy6G127940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCACCTTCACCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGGTTTCCTCTCTCTCTCACATTCTCTGCATATTTCCCTTTTTATGCTCTGCTACTGTTTTCTTGCTCTTTTCCTCGCCATCAGATTAAATTGATATACTCTTGTCCCTATCGGTACGGTAATGTGCTCAAGAAGTTTTTGAATGTTTTTCCCTAATCTACTGTGATTGGATTTTCTTGCTCTGTTCTGCTTCGATTTTAGAAGTATGCTTGGATTCTGTTTTCTTGCTTGTTTCGATCGAATTGAGTTTTTCGTCCACAAGTGTCTGCGGATTAGCGTTACTATGCACTGATTCTATTTTAATTTACTTGCTCTTTTTGGATCGGAGGAATTGAAATTGGACTGTGTTTAAGATGTATTTGTATATTTGTACTGAACGGTAGCGTTGCTATGCTTTGATTCTAAGTTCTTGGTGTTTTAAGCAAGGAGATTGAATTTTTGTTGTTATTATTATCGTTATTTAAATCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGTGTTCAAAGGAGCCAAAATTTTCCCGGAATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTTTTTCGTTCACCCCGACCTCCAGGCCCGACTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACTAGCGAGTACGATTTTCTAAACTTTCTTCTTCTATCAATTTCACTTTTTACAATATATTCTTCCACAAAATATTTTTGAACATACAAACAATAATTCTTTACGGATAGGATGGTTTGATTTCAAATACAACAAAATAAGTCTAAATATTTATGAACATTTCAAAATATGATCTACTACCTGATAGATATGATAGACAATAAAATTGCGTTATATTTATAATTTTTTTAAACAATTTTACCATTTATAATTATTATCAAATAGATTTTAGAAAAAAAAATAAGTGTAATGAATTTTGGTTTTCTATGTTTTTTATTTTATAATTTTATGTATAATACCAAAAAGATTATTTTAAAATATAGAAAAGAAAACTTAAATATTATATCCATTTTTTAGTTATCTAATAGATTTCAAATCAATGCTAAACTGAATTTATTGAACGTTCCAGTGAAAAATTACTTTGAAGATTTTAAAAACCTATTATTAAATTATGATGAAATAAACTTTTATTTTAATTCATTACTCTTAAGTTTGAACGCCTAACGTCATGATGTATTAATAAAGTGATAATGATAGAATTTAGAGGTATTGGAAGATAAAGAAAAAGTATTTAAAATGAGTTAATGAGAGGGAAATGTTTGGATGTGGGCTTTTAGGGTGTATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTTTACGGTGCACCCTCTGTGGAATCCCACGTCTACTCCATGAGGTGCATTTCATAA

mRNA sequence

ATGGCTGCTCACCTTCACCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGTGTTCAAAGGAGCCAAAATTTTCCCGGAATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTTTTTCGTTCACCCCGACCTCCAGGCCCGACTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACTAGCGAGGTGTATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTTTACGGTGCACCCTCTGTGGAATCCCACGTCTACTCCATGAGGTGCATTTCATAA

Coding sequence (CDS)

ATGGCTGCTCACCTTCACCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGTGTTCAAAGGAGCCAAAATTTTCCCGGAATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTTTTTCGTTCACCCCGACCTCCAGGCCCGACTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACTAGCGAGGTGTATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTTTACGGTGCACCCTCTGTGGAATCCCACGTCTACTCCATGAGGTGCATTTCATAA

Protein sequence

MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS*

Homology

[Close]

BLAST of Chy6G127940 vs. ExPASy Swiss-Prot
Match: Q7JUR6 (Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.0e-12
Identity = 39/140 (27.86%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D+ GR ++   GK+FPA+ + L+    +L + + P +K   + I YFHT +  + N+P
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGD-YVISYFHT-LTSTNNYP 447

Query: 85  GIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            +  LR +Y  +P   K NL+A + VHP    ++ +      F    +  KV  +  ++ 
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM-MTWWFTTFMAPAIKAKVHSLPGVEH 507

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L+  + ++++E+P +I ++D
Sbjct: 508 LYSAITKDQLEIPAYITEYD 524

[Close]

BLAST of Chy6G127940 vs. ExPASy Swiss-Prot
Match: Q292F9 (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15091 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.0e-12
Identity = 39/140 (27.86%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D+ GR ++   GK+FPA+ + L+    +L + + P +K   + I YFHT +  + N+P
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGD-YVISYFHT-LTSTNNYP 449

Query: 85  GIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            +  LR +Y  +P   K NL+A + VHP    ++ +      F    +  KV  +  ++ 
Sbjct: 450 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM-MTWWFTTFMAPAIKAKVHSLPGVEH 509

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L+  + ++++E+P +I ++D
Sbjct: 510 LYSAITKDQLEIPAYITEYD 526

[Close]

BLAST of Chy6G127940 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 34/140 (24.29%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++    + F A+   L     +    +  R+ N+ + ++YFHT     +N P
Sbjct: 346 GVDFLGRPVVVFVARHFTAQNTDLGKAVAYF-ISVLDRIVNRDYVVVYFHTH-STEENQP 405

Query: 85  GIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            ++ L+ +Y  +    + NL+A + VHP + AR+ +      F  S V  KV ++S +  
Sbjct: 406 PMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARI-VTWFFTTFTASSVKEKVHFLSGVQY 465

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L++ +  +++++P ++ ++D
Sbjct: 466 LYDWINPDQLDIPAYVLEYD 482

[Close]

BLAST of Chy6G127940 vs. ExPASy Swiss-Prot
Match: Q0IHU9 (Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.7e-05
Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 68  FTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIF 127
           + ++Y + G    +  PG+  ++  Y  I   ++ NL++   VHP    R  LA L R F
Sbjct: 187 YMVVYLN-GATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-LTRPF 246

Query: 128 FTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDL 168
            +S+   K++YVS +  L E +    + +PE I   DE+L
Sbjct: 247 ISSKFSSKIKYVSTLAELSELIPMEYVHIPETIVKLDEEL 284

[Close]

BLAST of Chy6G127940 vs. ExPASy TrEMBL
Match: A0A0A0L0Z7 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.1e-110
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAAHL PPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAV+FVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Chy6G127940 vs. ExPASy TrEMBL
Match: A0A1S3BJ81 (ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103490659 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAA LHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFL 120
           PRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEAV+FVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Chy6G127940 vs. ExPASy TrEMBL
Match: A0A5A7UCK6 (Ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00390 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.4e-104
Identity = 199/238 (83.61%), Postives = 200/238 (84.03%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFP------------------ 60
           MAA LHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFP                  
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPGFLSLSLSLKFSAYFPFY 60

Query: 61  -------------------ARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNF 120
                              ARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNF
Sbjct: 61  VPLLFSCSFRRDQIKFYRYARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNF 120

Query: 121 PGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRID 180
           PGIAALRSIYDAIPAAVKANLEAV+FVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRID
Sbjct: 121 PGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRID 180

Query: 181 LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 202
           LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 181 LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 238

[Close]

BLAST of Chy6G127940 vs. ExPASy TrEMBL
Match: A0A6J1L134 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500201 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.6e-104
Identity = 185/201 (92.04%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKIF
Sbjct: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEAV+FVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSIDSHVYSMRCIS 201

[Close]

BLAST of Chy6G127940 vs. ExPASy TrEMBL
Match: A0A6J1E710 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431194 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.6e-104
Identity = 185/201 (92.04%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKIF
Sbjct: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEAV+FVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSIDSHVYSMRCIS 201

[Close]

BLAST of Chy6G127940 vs. NCBI nr
Match: XP_004146166.1 (ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN55625.1 hypothetical protein Csa_010698 [Cucumis sativus])

HSP 1 Score: 405 bits (1042), Expect = 1.07e-142
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAAHL PPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAV+FVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 201
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Chy6G127940 vs. NCBI nr
Match: XP_008448498.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis melo])

HSP 1 Score: 404 bits (1037), Expect = 6.17e-142
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAA LHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFL 120
           PRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEAV+FVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 201
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Chy6G127940 vs. NCBI nr
Match: XP_038905989.1 (ganglioside-induced differentiation-associated protein 2 [Benincasa hispida])

HSP 1 Score: 393 bits (1009), Expect = 1.28e-137
Identity = 194/204 (95.10%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MAAHLHP---PPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEE 60
           MA  L P   PPP+QN+LEKLDVFKIKGRDKQGRRILRITGKFFPAR+VSLDVLKKHLEE
Sbjct: 1   MATQLQPQLPPPPDQNHLEKLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVLKKHLEE 60

Query: 61  KIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQAR 120
           KIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAV+FVHPDLQAR
Sbjct: 61  KIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQAR 120

Query: 121 LFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGL 180
           LFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGL
Sbjct: 121 LFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGL 180

Query: 181 ESDHPRVYGAPSVESHVYSMRCIS 201
           ESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 181 ESDHPRVYGAPSVESHVYSMRCIS 204

[Close]

BLAST of Chy6G127940 vs. NCBI nr
Match: XP_022923521.1 (ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschata] >XP_023007626.1 ganglioside-induced differentiation-associated protein 2-like [Cucurbita maxima] >KAG6577807.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015847.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385 bits (990), Expect = 9.05e-135
Identity = 185/201 (92.04%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKIF
Sbjct: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEAV+FVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 201
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSIDSHVYSMRCIS 201

[Close]

BLAST of Chy6G127940 vs. NCBI nr
Match: KAA0052930.1 (ganglioside-induced differentiation-associated protein 2 [Cucumis melo var. makuwa] >TYK11387.1 ganglioside-induced differentiation-associated protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 387 bits (993), Expect = 1.18e-134
Identity = 199/238 (83.61%), Postives = 200/238 (84.03%), Query Frame = 0


Query: 1   MAAHLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFP------------------ 60
           MAA LHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFP                  
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPGFLSLSLSLKFSAYFPFY 60

Query: 61  -------------------ARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNF 120
                              ARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNF
Sbjct: 61  VPLLFSCSFRRDQIKFYRYARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNF 120

Query: 121 PGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRID 180
           PGIAALRSIYDAIPAAVKANLEAV+FVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRID
Sbjct: 121 PGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRID 180

Query: 181 LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 201
           LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS
Sbjct: 181 LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS 238

[Close]

BLAST of Chy6G127940 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 287.0 bits (733), Expect = 1.2e-77
Identity = 134/193 (69.43%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  +EKL++FKI GRDK+GR+ILRI GKFFPAR +SLDVLKK+LEEKIFPRL  K F +
Sbjct: 10  QEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALR+IYDAIP  V+ NL+ V+F+HP LQ+RLFLAT GR  F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RY+SR+D LWEHVRRNEIE+PEF+YDHD+DLEYRPMMDYG ESDH RV+   +V
Sbjct: 130 GLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  +SMRCIS
Sbjct: 190 DSSVSSFSMRCIS 202

[Close]

BLAST of Chy6G127940 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 171.0 bits (432), Expect = 9.7e-43
Identity = 75/166 (45.18%), Postives = 116/166 (69.88%), Query Frame = 0


Query: 15  LEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFH 74
           L+ L  F ++G D+ G RI RI GK+FPARVVS + LKK++ +KI  +       ++Y H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 75  TGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYG 134
           + VQ+  N PGI  LR IY+ +P+ +K  L+ V+F+HP L++RL +ATLGR+  +  +Y 
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYW 168

Query: 135 KVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 181
           K++YVSR+  LWE +++ E+E+P+F+ +HD  LE+RP+ DYG+E D
Sbjct: 169 KIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

[Close]

BLAST of Chy6G127940 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10
Identity = 34/140 (24.29%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D +G  ++ + G  F  R + L+    ++ ++  P ++ K ++I+YFH+     Q  P
Sbjct: 404 GVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPVIQ-KPYSIVYFHSAAS-LQVQP 463

Query: 85  GIAALRSIYDAIPAAVKANLEAVFFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            +  ++ +   +    + NL+A++ +HP    +  + T+ + F  + V+ KV Y  R+  
Sbjct: 464 DLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATILTM-QFFVDNVVWKKVVYADRLLQ 523

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L+++V R ++ +P+F++ HD
Sbjct: 524 LFKYVPREQLTIPDFVFQHD 540

The following BLAST results are available for this feature:

BLAST of Chy6G127940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7JUR6	5.0e-12	27.86	Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1	[more]
Q292F9	5.0e-12	27.86	Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15...	[more]
A7T167	1.2e-08	24.29	Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1	[more]
Q0IHU9	2.7e-05	30.00	Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1	[more]

BLAST of Chy6G127940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0Z7	7.1e-110	99.00	CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 P...	[more]
A0A1S3BJ81	2.7e-109	98.51	ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656...	[more]
A0A5A7UCK6	3.4e-104	83.61	Ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo var. ma...	[more]
A0A6J1L134	7.6e-104	92.04	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxim...	[more]
A0A6J1E710	7.6e-104	92.04	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita mosch...	[more]

BLAST of Chy6G127940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146166.1	1.07e-142	99.00	ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN5...	[more]
XP_008448498.1	6.17e-142	98.51	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis mel...	[more]
XP_038905989.1	1.28e-137	95.10	ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]	[more]
XP_022923521.1	9.05e-135	92.04	ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschat...	[more]
KAA0052930.1	1.18e-134	83.61	ganglioside-induced differentiation-associated protein 2 [Cucumis melo var. maku...	[more]

BLAST of Chy6G127940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35750.1	1.2e-77	69.43	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT3G10210.1	9.7e-43	45.18	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT1G69340.1	4.8e-10	24.29	appr-1-p processing enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	SMART	SM00516	sec14_4	coord: 14..163 e-value: 3.4E-15 score: 66.5
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 30..166 e-value: 4.7E-29 score: 101.4
IPR001251	CRAL-TRIO lipid binding domain	CDD	cd00170	SEC14	coord: 25..157 e-value: 1.70991E-11 score: 57.7802
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 14..168 e-value: 1.8E-25 score: 91.3
IPR036865	CRAL-TRIO lipid binding domain superfamily	SUPERFAMILY	52087	CRAL/TRIO domain	coord: 19..154
None	No IPR available	PANTHER	PTHR11106:SF103	OS04G0561200 PROTEIN	coord: 11..201
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 11..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G127940.1	Chy6G127940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane