Chy6G126700 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGACAACAAGGTGGCTCCGATCGGTCACCGCCGTGCCGTATCGTTCGGGGGGAAGGAGCCGAGATTGATTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCTATTCGTGAGGAAAAGGAACCTTCTCCCAATTCCTAA ATGGCGGACAACAAGGTGGCTCCGATCGGTCACCGCCGTGCCGTATCGTTCGGGGGGAAGGAGCCGAGATTGATTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCTATTCGTGAGGAAAAGGAACCTTCTCCCAATTCCTAA ATGGCGGACAACAAGGTGGCTCCGATCGGTCACCGCCGTGCCGTATCGTTCGGGGGGAAGGAGCCGAGATTGATTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCTATTCGTGAGGAAAAGGAACCTTCTCCCAATTCCTAA MADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFEDLRAIREEKEPSPNS* Homology
BLAST of Chy6G126700 vs. ExPASy TrEMBL
Match: A0A0A0L198 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011635 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Chy6G126700 vs. ExPASy TrEMBL
Match: A0A5A7UAS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001620 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Chy6G126700 vs. ExPASy TrEMBL
Match: A0A1S3BJN6 (uncharacterized protein LOC103490783 OS=Cucumis melo OX=3656 GN=LOC103490783 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Chy6G126700 vs. ExPASy TrEMBL
Match: A0A6J1GL99 (uncharacterized protein LOC111454968 OS=Cucurbita moschata OX=3662 GN=LOC111454968 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 9.5e-14 Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0
BLAST of Chy6G126700 vs. ExPASy TrEMBL
Match: A0A6J1L834 (uncharacterized protein LOC111500186 OS=Cucurbita maxima OX=3661 GN=LOC111500186 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-07 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of Chy6G126700 vs. NCBI nr
Match: XP_031737872.1 (uncharacterized protein LOC116402546 [Cucumis sativus]) HSP 1 Score: 107 bits (268), Expect = 1.39e-28 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Chy6G126700 vs. NCBI nr
Match: XP_008448684.1 (PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo] >KAA0053043.1 uncharacterized protein E6C27_scaffold344G001590 [Cucumis melo var. makuwa] >TYK11498.1 uncharacterized protein E5676_scaffold139G001620 [Cucumis melo var. makuwa]) HSP 1 Score: 103 bits (256), Expect = 6.82e-27 Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Chy6G126700 vs. NCBI nr
Match: XP_038905810.1 (uncharacterized protein LOC120091761 [Benincasa hispida]) HSP 1 Score: 92.4 bits (228), Expect = 4.18e-22 Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0
BLAST of Chy6G126700 vs. NCBI nr
Match: KAE8650028.1 (hypothetical protein Csa_011525 [Cucumis sativus]) HSP 1 Score: 90.9 bits (224), Expect = 5.36e-22 Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
BLAST of Chy6G126700 vs. NCBI nr
Match: XP_023539506.1 (uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 85.1 bits (209), Expect = 1.20e-19 Identity = 45/57 (78.95%), Postives = 48/57 (84.21%), Query Frame = 0
BLAST of Chy6G126700 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 8.0e-05 Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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