Chy6G126360 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCTCAAATCCCACCGCCGCGCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACCCTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGGTTCGTTCATCGTTAGTTAGTCCTTCTATCTTTTTCCATTTTGGATTTAGGGATTTTTGTATATCAAGGATTTGAAACTGAAGAATCTTGTAATGGGTTTTTTTTTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAAGCGTTGAGGAATAAAAAAGAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG ATGGATTCCTCAAATCCCACCGCCGCGCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACCCTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAAGCGTTGAGGAATAAAAAAGAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG ATGGATTCCTCAAATCCCACCGCCGCGCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACCCTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAAGCGTTGAGGAATAAAAAAGAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG MDSSNPTAALTKPCFLPSSSAADDDMEPGISSHPFFSRTYRSRSSRFDDPLPLPHFLDSCFLCRKPLGNNTDIFMYRGDTPFCSEECRQEQIEIDEMKEKKWRRSSAAAVKALRNKKEQRRRSTSPNKSSPPSEYPFCAGTVAAA* Homology
BLAST of Chy6G126360 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.5e-23 Identity = 62/105 (59.05%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.9e-17 Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09 Identity = 33/60 (55.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy TrEMBL
Match: A0A0A0L1D2 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G016990 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74 Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy TrEMBL
Match: A0A5A7V4X5 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18110G00010 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.6e-72 Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy TrEMBL
Match: A0A1S3BKF4 (uncharacterized protein LOC103490823 OS=Cucumis melo OX=3656 GN=LOC103490823 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.6e-72 Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy TrEMBL
Match: A0A6J1E6I6 (uncharacterized protein LOC111431226 OS=Cucurbita moschata OX=3662 GN=LOC111431226 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.1e-47 Identity = 109/160 (68.12%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of Chy6G126360 vs. ExPASy TrEMBL
Match: A0A6J1HL26 (uncharacterized protein LOC111465132 OS=Cucurbita maxima OX=3661 GN=LOC111465132 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 3.6e-47 Identity = 108/160 (67.50%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of Chy6G126360 vs. NCBI nr
Match: XP_004147248.1 (FCS-Like Zinc finger 2 [Cucumis sativus] >KGN55805.1 hypothetical protein Csa_011069 [Cucumis sativus]) HSP 1 Score: 287 bits (735), Expect = 1.03e-97 Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Chy6G126360 vs. NCBI nr
Match: XP_008448751.1 (PREDICTED: uncharacterized protein LOC103490823 [Cucumis melo] >KAA0063123.1 senescence-associated family protein [Cucumis melo var. makuwa]) HSP 1 Score: 280 bits (715), Expect = 1.16e-94 Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Chy6G126360 vs. NCBI nr
Match: XP_038903293.1 (FCS-Like Zinc finger 2-like [Benincasa hispida]) HSP 1 Score: 229 bits (584), Expect = 1.24e-74 Identity = 124/156 (79.49%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of Chy6G126360 vs. NCBI nr
Match: XP_023552761.1 (uncharacterized protein LOC111810300 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203 bits (517), Expect = 2.58e-64 Identity = 112/161 (69.57%), Postives = 121/161 (75.16%), Query Frame = 0
BLAST of Chy6G126360 vs. NCBI nr
Match: KAG6577647.1 (FCS-Like Zinc finger 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015685.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 200 bits (508), Expect = 5.86e-63 Identity = 111/160 (69.38%), Postives = 120/160 (75.00%), Query Frame = 0
BLAST of Chy6G126360 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 0
BLAST of Chy6G126360 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 109.4 bits (272), Expect = 2.5e-24 Identity = 62/105 (59.05%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Chy6G126360 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 89.0 bits (219), Expect = 3.5e-18 Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of Chy6G126360 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.9 bits (159), Expect = 3.2e-11 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Chy6G126360 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 33/60 (55.00%), Postives = 36/60 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|