Chy6G126250 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G126250
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	AAI domain-containing protein
Location	chrH06: 25158006 .. 25159044 (-)
RNA-Seq Expression	Chy6G126250
Synteny	Chy6G126250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGCATTAGAGAGGGTCGTTGGGGATTAGTAATGGTAGTGGTGGCAGTAATGGCGATGGGAGTAGGGGAAGTGGCGGCGCTGACGGCTGCGGAATGTAAGGCGGAGAGAGATATGGCAGTGAGGGAGTGTTTAGCAGTGGTGTTTGGGAGAAATCCGTCACCGGCGTGTTGCGAGAGAGCGAGAGTGAGCCATACAGAGTGCATTTGCCCAGCAGTTACGCCTAAGCTTATGACTTATGTTGATCCTAGTCGCGCCATTCGGCTCATTCAAAGCTGCGGCCGTAGAGTCCCTCGCCATTTCAAATGTGGAAGTAATTAACTTCTCTAAACTCTCTCTCTTTAAATTTGAATTTTCATCATTTATTTTGGGTTACAGAAGGGATTTTGTTTATTTGTTCTTCAATCTTTGAATCACTAAGTTCCTTTTGAAAAAAAATTTAATGAATGATGAAATTGTAAGTTTTTACTATTAAAAATGAAAATAATATGTGTGATAGGCTTCCTATCTATATTTATCATAATACATACACAAATCTTAATTTATTGTGTGAAACTTTTGAAATAGTAAACGTCTCAACTCCAACTTAGTTCAATAATAATTGACATGTTCTTTGTCTCACTCCGAATATTTTATGTTTATTTTGTTGCACTAAAATAAATAAAAAAGTAAATTGTTTTTTTAATAAAAGAAAGTTTTAGAGCATTTTTTATAATTTAATATTTTAAAAAATAATTTTTGTATTAGATATAAAATAAAGGGACATTTCTTTTGTAAATATGTAAAATAATCAACTTTTTTTCCTGTTTATTTAATTTTTAATGCATATGAAACTTAATTATATAAATAAGTGATTTTTTTCAATGAAAAACTAAATAGTGAAATTTTTAAAACTAGTGATAAAAGACTATCAGTGGTATAATCCAAAATTTTGCTATAGCTTATAAATATTTTAATTTATTTTACTCTTTTTAAAAATACTCTAACTAAATAAGTGAAATTAATGTTTGTAAATGCAGGTTTTACCACTCCATGA

mRNA sequence

ATGGTGGGCATTAGAGAGGGTCGTTGGGGATTAGTAATGGTAGTGGTGGCAGTAATGGCGATGGGAGTAGGGGAAGTGGCGGCGCTGACGGCTGCGGAATGTAAGGCGGAGAGAGATATGGCAGTGAGGGAGTGTTTAGCAGTGGTGTTTGGGAGAAATCCGTCACCGGCGTGTTGCGAGAGAGCGAGAGTGAGCCATACAGAGTGCATTTGCCCAGCAGTTACGCCTAAGCTTATGACTTATGTTGATCCTAGTCGCGCCATTCGGCTCATTCAAAGCTGCGGCCGTAGAGTCCCTCGCCATTTCAAATGTGGAAGTTTTACCACTCCATGA

Coding sequence (CDS)

ATGGTGGGCATTAGAGAGGGTCGTTGGGGATTAGTAATGGTAGTGGTGGCAGTAATGGCGATGGGAGTAGGGGAAGTGGCGGCGCTGACGGCTGCGGAATGTAAGGCGGAGAGAGATATGGCAGTGAGGGAGTGTTTAGCAGTGGTGTTTGGGAGAAATCCGTCACCGGCGTGTTGCGAGAGAGCGAGAGTGAGCCATACAGAGTGCATTTGCCCAGCAGTTACGCCTAAGCTTATGACTTATGTTGATCCTAGTCGCGCCATTCGGCTCATTCAAAGCTGCGGCCGTAGAGTCCCTCGCCATTTCAAATGTGGAAGTTTTACCACTCCATGA

Protein sequence

MVGIREGRWGLVMVVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACCERARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP*

Homology

[Close]

BLAST of Chy6G126250 vs. ExPASy TrEMBL
Match: A0A0A0L5D3 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017110 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MVGIREGRWGLVMVVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACCE 60
           MVGIREGRWGLVMVVVAVMAMGVGEV ALTAAECK ERDMAVRECLAVVFGRNPSPACCE
Sbjct: 1   MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE 60

Query: 61  RARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           RARVSHTECIC AVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP
Sbjct: 61  RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110

[Close]

BLAST of Chy6G126250 vs. ExPASy TrEMBL
Match: A0A1S3BL40 (uncharacterized protein LOC103490836 OS=Cucumis melo OX=3656 GN=LOC103490836 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.1e-51
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEVAALTAAECKAERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           ERARVSH ECICPAVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS+TTP
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSYTTP 111

[Close]

BLAST of Chy6G126250 vs. ExPASy TrEMBL
Match: A0A5A7TC47 (AAI domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00830 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 101/107 (94.39%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEVAALTAAECKAERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107
           ERARVSH ECICPAVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107

[Close]

BLAST of Chy6G126250 vs. ExPASy TrEMBL
Match: A0A0A0L677 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073790 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.2e-46
Identity = 94/111 (84.68%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MVG-IREGRWGLVMVVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACC 60
           MVG I+ GRWGLVM VVA+MAM VGEVAALTAAEC+AERDMAV  C +V+FGRNPSPACC
Sbjct: 1   MVGIIKMGRWGLVMAVVAIMAMAVGEVAALTAAECQAERDMAVNACKSVLFGRNPSPACC 60

Query: 61  ERARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           +RARVSHT CICPAVTPKLMTYVDP RAIRLI+SCGR+VPRHFKCGSFTTP
Sbjct: 61  QRARVSHTVCICPAVTPKLMTYVDPIRAIRLIESCGRKVPRHFKCGSFTTP 111

[Close]

BLAST of Chy6G126250 vs. ExPASy TrEMBL
Match: A0A1S3BLC9 (uncharacterized protein LOC103491080 OS=Cucumis melo OX=3656 GN=LOC103491080 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 4   IREGRWGLVMVVVA-VMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACCERA 63
           IR GRWGLVM VVA +MAM VGEVAALTAAEC+AERDMAV  C +V+FGRNPSPACC+RA
Sbjct: 5   IRMGRWGLVMAVVAIIMAMAVGEVAALTAAECQAERDMAVNACKSVLFGRNPSPACCQRA 64

Query: 64  RVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
           RVSHTECICPAVTPKLMTYVDP RAIRLI+SCGR+VPRHFKCGSFTTP
Sbjct: 65  RVSHTECICPAVTPKLMTYVDPIRAIRLIESCGRKVPRHFKCGSFTTP 112

[Close]

BLAST of Chy6G126250 vs. NCBI nr
Match: XP_004147240.1 (uncharacterized protein LOC101207186 [Cucumis sativus] >KGN55817.1 hypothetical protein Csa_009793 [Cucumis sativus])

HSP 1 Score: 215 bits (548), Expect = 2.46e-70
Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MVGIREGRWGLVMVVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACCE 60
           MVGIREGRWGLVMVVVAVMAMGVGEV ALTAAECK ERDMAVRECLAVVFGRNPSPACCE
Sbjct: 1   MVGIREGRWGLVMVVVAVMAMGVGEVMALTAAECKTERDMAVRECLAVVFGRNPSPACCE 60

Query: 61  RARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110
           RARVSHTECIC AVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP
Sbjct: 61  RARVSHTECICAAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110

[Close]

BLAST of Chy6G126250 vs. NCBI nr
Match: XP_008448771.1 (PREDICTED: uncharacterized protein LOC103490836 [Cucumis melo])

HSP 1 Score: 207 bits (527), Expect = 4.06e-67
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEVAALTAAECKAERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110
           ERARVSH ECICPAVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS+TTP
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSYTTP 111

[Close]

BLAST of Chy6G126250 vs. NCBI nr
Match: KAA0041042.1 (uncharacterized protein E6C27_scaffold477G00110 [Cucumis melo var. makuwa] >TYK12068.1 uncharacterized protein E5676_scaffold1017G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (507), Expect = 4.57e-64
Identity = 101/107 (94.39%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MVGIREGRWGLVM-VVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACC 60
           MVGIREGRWGLVM VV+AVMAMGVGEVAALTAAECKAERDMAV++CLAVVFGRNPSPACC
Sbjct: 1   MVGIREGRWGLVMGVVLAVMAMGVGEVAALTAAECKAERDMAVKKCLAVVFGRNPSPACC 60

Query: 61  ERARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 106
           ERARVSH ECICPAVT KLMTYVDPSRAIRLIQSCGRRVPRHFKCGS
Sbjct: 61  ERARVSHAECICPAVTSKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107

[Close]

BLAST of Chy6G126250 vs. NCBI nr
Match: XP_011650514.1 (uncharacterized protein LOC101222349 [Cucumis sativus] >KGN56087.1 hypothetical protein Csa_011247 [Cucumis sativus])

HSP 1 Score: 190 bits (483), Expect = 2.09e-60
Identity = 94/111 (84.68%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MVGI-REGRWGLVMVVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACC 60
           MVGI + GRWGLVM VVA+MAM VGEVAALTAAEC+AERDMAV  C +V+FGRNPSPACC
Sbjct: 1   MVGIIKMGRWGLVMAVVAIMAMAVGEVAALTAAECQAERDMAVNACKSVLFGRNPSPACC 60

Query: 61  ERARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110
           +RARVSHT CICPAVTPKLMTYVDP RAIRLI+SCGR+VPRHFKCGSFTTP
Sbjct: 61  QRARVSHTVCICPAVTPKLMTYVDPIRAIRLIESCGRKVPRHFKCGSFTTP 111

[Close]

BLAST of Chy6G126250 vs. NCBI nr
Match: XP_023553118.1 (uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189 bits (481), Expect = 4.49e-60
Identity = 93/109 (85.32%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 3   GIREGRWGLVM-VVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVFGRNPSPACCER 62
           GI   RWGLV+ VVV VMA+ VGEVAALTAA+CKAER+MAV+ECLAVVFGRNPSPACC+R
Sbjct: 5   GIGMRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACCQR 64

Query: 63  ARVSHTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 110
           ARVSHTECICPAVTPKLMTYVDP+RAIRLI+SCGR+VPRHFKCGS+TTP
Sbjct: 65  ARVSHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGSYTTP 113

[Close]

BLAST of Chy6G126250 vs. TAIR 10
Match: AT4G33550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.9e-09
Identity = 31/105 (29.52%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 11  LVMVVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVF-----GRNPSPACCERARVS 70
           LV++ +A+  +G   V    A  C A     + EC   V       + PS +CC   R  
Sbjct: 9   LVILAIALFMIGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPI 68

Query: 71  HTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGSFTTP 111
              C C  V+  +  Y+D  + + + +SCG+++P  +KCGS+T P
Sbjct: 69  DVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGSYTIP 113

[Close]

BLAST of Chy6G126250 vs. TAIR 10
Match: AT4G33550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07
Identity = 29/101 (28.71%), Postives = 48/101 (47.52%), Query Frame = 0


Query: 11  LVMVVVAVMAMGVGEVAALTAAECKAERDMAVRECLAVVF-----GRNPSPACCERARVS 70
           LV++ +A+  +G   V    A  C A     + EC   V       + PS +CC   R  
Sbjct: 9   LVILAIALFMIGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPI 68

Query: 71  HTECICPAVTPKLMTYVDPSRAIRLIQSCGRRVPRHFKCGS 107
              C C  V+  +  Y+D  + + + +SCG+++P  +KCGS
Sbjct: 69  DVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGS 109

The following BLAST results are available for this feature:

BLAST of Chy6G126250 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G126250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D3	1.5e-53	97.27	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017110 PE=4 SV...	[more]
A0A1S3BL40	4.1e-51	93.69	uncharacterized protein LOC103490836 OS=Cucumis melo OX=3656 GN=LOC103490836 PE=...	[more]
A0A5A7TC47	1.1e-48	94.39	AAI domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0L677	5.2e-46	84.68	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073790 PE=4 SV...	[more]
A0A1S3BLC9	1.2e-45	86.11	uncharacterized protein LOC103491080 OS=Cucumis melo OX=3656 GN=LOC103491080 PE=...	[more]

BLAST of Chy6G126250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147240.1	2.46e-70	97.27	uncharacterized protein LOC101207186 [Cucumis sativus] >KGN55817.1 hypothetical ...	[more]
XP_008448771.1	4.06e-67	93.69	PREDICTED: uncharacterized protein LOC103490836 [Cucumis melo]	[more]
KAA0041042.1	4.57e-64	94.39	uncharacterized protein E6C27_scaffold477G00110 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_011650514.1	2.09e-60	84.68	uncharacterized protein LOC101222349 [Cucumis sativus] >KGN56087.1 hypothetical ...	[more]
XP_023553118.1	4.49e-60	85.32	uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy6G126250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33550.2	2.9e-09	29.52	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G33550.1	1.6e-07	28.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..102 e-value: 4.0E-8 score: 35.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 42..100
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 13..104 e-value: 3.5E-10 score: 39.9
None	No IPR available	PANTHER	PTHR33286	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 9..110
None	No IPR available	PANTHER	PTHR33286:SF28	SUBFAMILY NOT NAMED	coord: 9..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G126250.1	Chy6G126250.1	mRNA