Chy6G124470 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G124470
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RNA-binding protein pno1
Location	chrH06: 23110471 .. 23114530 (-)
RNA-Seq Expression	Chy6G124470
Synteny	Chy6G124470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCTCCATAACCTCAACCCCGTCAACCACAATGTCCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAACTACATCCTTCTCGGCGCTGCCTCCAGCTGCATTTTCCTTACTCTCTCCCTCCGTCTCCTCCCTTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCTGCTGCCGTCTCCGGCTGCGCCATGGCTGCTGCTTCCTCGACTCGATGGTTCGGTGTCCACATGGTGTTCACAGTCTTGACAGCGATATTCCAAGGATCAGTAGCGATGCTTGTGTACACAAGAACAGGGGATTTTCTGTCGGAGTTGAAATCTTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTACTAGAATGGGTTGTTCTTACTTTGGCATTCTTTTTGAGGTATTATGCTTTTGTGGAAGAAGGGAGCAACAACAATGGTGCGGCTATGAGAAGTGCTAAAGTTCAACAAGATGAGGATTTGAAAGATTGGCCATGGCCTTTTCAAGTTTAAATAATGTATTTTTTTTTCTTTTAGTGTAATTGGTTGATTTGATTTGTAATTCTTTGTTGGGAATTATATGATATTGTGTATTTTTGTTTTGGTTTATTGTAGTGGGTTTTGAGAGAAAATGTGGAAATTTCTTAAGTGAAATGTTGGAGAATTAATCTAATATTATTGATGATGATGATGCTCTGTTCTTTTTATGAAGATGTGATACTCTGTTCTTGGTGGGTAACTTTGTGTTTCTTTTGTGGATCTTCTATTTCTTGTGAATGTAAGGTGTGGGATTCAGAGAAATTTTTGTAATAAAAAAATGTTGGGTTAAATATAAGAAGATTGAAGAAAAAAATCTTCAAAATATTGGAGATGGATGAAATTGGCTATCGAGAAAAAAGAATGTTGAGAGTGGGATTTGAACCCACGCCCTTTCGGACCAGAACCTTAATCTGGCGCCTTAGACCAACTCGGCCATCTCAACTTTGTTGACAACAGAAATCCAATTAAAATTATATATTCATAGCCTTTTCCAAGGCATACTTACACTACTTGCTCCATCAAATCCCCCCCACCGTACTCAAACAACAAATAAAATAAATAAGCATCAAAATAACCAACATTAGTTTCCGCTCTCGGATTCAATTTTATCTATCAAAATTCATATTTGAACATGGTTTCGAGGTAGTATTATCGTCACGCCATGGATAACCAAGGCCCATCAATCAGCCCAACAGCCCAATTCCGCTTTTTTTTTTTTTTTTTTTTAATAATTGAAAAGAAAAAAAAACAAATGAGAATAATAATAACAATAATGAAAATCGTTAAACCCTAAAGCCTCCTCTTTTCTTCACCCTACATCTTCACAATCTCTTCTCCTCTTCCCTCTCACCACTTCAGGAACCCCCGCCGTCGCTCTACTCCTTTTTCACGACTTTTCTACCCTCTCTCCATCTCAGGTATTCTCATTATTTCCTCTTCTTTCACTTTCTACTTCTATTGCTTACAATCCATCAACGAACCTCTCCAAACCTTACTCTTCCATACGAACCGATTTTTAAATCAATCGTTTTTCAGTTTTTTTCCAGATTTTTCCAGATTTTATATTGGATTAAAATCCCCTTCTCTTATTGACGTAGTAATGTTACTCATACTCGTTTGTAGCTAATCATAATTTTACCTGAATTCCTTCTGACCTTCCCAGTAAGGCACTTCTGAAGTTCGTTCTGATTAAGCCTTTACATATATACATAATATAACGACATCTTACCTATATTTTGTTGCTTAATTGAAGATTTTGGGTGTTTTCAGTGTGGAAACTCCGCACAATTATTCCATAATGCAATCAACCGAAGCTTCCACTTCCATGGAAGTGGAAACAATTTCAACTCAAACAAAAGATGTAGTTAGCACATTACCTCCAAAACCACAGTTCGATCCTCTAAAGCCTCATGAAATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCACCCCATCGTTATTCCCCTCTAAAGAAATCATGGATGGATATTTACACCCCAATTTACGACCAGATGAAAATCGACATCCGAATGAATCTCAAGGCACGGAAAGTCGAGTTGAAAACCAGAGCAGACACACCCGACATTAGTAACTTGCAGAAGTGTGCAGATTTTGTTCATGCTTTCATGCTTGGTTTCGATGTTATTGATGCCATTGCACTCCTACGTGTTGATGAGCTCTATGTCGAGTCTTTTGAGATTAAAGATGTTAAAACGTTGCGAGGCGAGCACTTATCCCGAGCCATTGGTAGACTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCAATCGAAAATGCCACCAAGACGAGGATAGTTATTGCAGATACTAAGATTCACATATTAGGATCCTTTGCAAATATCAAGATTGCTAGGGATTCTCTTTGCAGTCTCATCTTAGGGTCACCTGCTGGAAAAGTTTATTCAAAGCTAAGGGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGATCTGTAATTTCATGTTTGTTTGTCTTGATAAATGAATTTTGCATACACTAGTTGTTTGAGGAAGAGTATACAACTTTGTCGAAAAGCTTATGCATTGAAGTTTTGTATCAATACACAAAACGGGTGTCAGTTGATTCTTGGTATTTGCGGGTGTTGTTTTAACATTGTTGATTGAGGTTCGTATGTCGTAGATATGTTTGATTAATTGAAGGGAACATTGGTGGTGTCCATTTGAGTCTTACCTATAAAGTGTGTACTATTTTATGAGAGAAAGAAAGGGGCATAGGTTTTTTTTTCCTGTTTAACACAACTGGGTTTCAAGATTGATTCATCATTAGTGGTTTCAGTGTCTTTGATAAATGGTTTAAATCATTTTTTTCAAAAGAACTTATGCATAAATGGTTTTTTTTAAAAGAATGCTTTTACCCTCTTATTCAAATTCCTGCACATTAACGCATCCAATAAAAATCAACACACAAAAAAAGGCTCTCAAATTTGCTAATTCCAAAAAGTCCAAACCTTGCACAACATGATGAATTTTATTAATCTCTCTACTCTCAAAAACGAAGAAAAAAAAAACTAACTCATTGTTGGATGGTATTCCTATTCATAATCCTTTGTTAAATTATTGTTTATGGAAAACTGTGTACTTTAGTTTTTTTAATTTCTAATTTCCCTCAATTTCAAATATTGCACATTCTCGGTTTTGTTTCTATTTGATCTCTATCACTATTAATATTAATTGAAAAAATCATATCATAATTATTTTTAATTCAATAACGAGGAGATGATGATAAATAACAAGGTGGACTCGAAACACAGAAATCAAATTAACACTAAATTCAAAACTCTAGAGTAAAAAATGTAATATTTGGAAACTTGGACAAAAAAAATAAATTTAAAACCAATGGACATATCAGTACCCATGCTTTTGTATCTACATGGGTAGAGATTTCACCAATTTTGTAGCTGATCCACACCTCATTCCAGCTTCCAAATGTAAGCTATAATGATACCATATCTATCTCCCAATATGTCATCTCTACAGACTACAAGGTAACTTCCCTATGTTTCCTTTTTTTTTTTTTTTTCCAGAAAGATTATACGTAATATTTTGTGGCCTCTACAACTTTGAATTCATATTAACATGCACTTGATCAGGATTCCAATGGCTTACATAAGTTCCGAGAGAGACAATACCGTTGGAGTCAAGCCATCCCCAACGGTGACTAGTTTCTCAGTCAAAGGCCCTAATATAATCGAAGAGTCAATACTCAAGGTTTGTTTTTCTCAACCAAGATTTTCTATATGAAATGTTTCATTTTAGTTCAAAATTCATGCAAACTTAAGCTTAGTAATCAATGAAATCAAGCTAATGGAACATTTATCTAACAAGATGTTTTATTAGCCTGATATAATAGGGTTTGTGGTTTAAAATAGTAAAATCACCTTAAATAGGGCTATATCTTGGATAGTTACGAACGCCGTGAATAA

mRNA sequence

ATGGGTTTCTCCATAACCTCAACCCCGTCAACCACAATGTCCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAACTACATCCTTCTCGGCGCTGCCTCCAGCTGCATTTTCCTTACTCTCTCCCTCCGTCTCCTCCCTTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCTGCTGCCGTCTCCGGCTGCGCCATGGCTGCTGCTTCCTCGACTCGATGGTTCGGTGTCCACATGGTGTTCACAGTCTTGACAGCGATATTCCAAGGATCAGTAGCGATGCTTGTGTACACAAGAACAGGGGATTTTCTGTCGGAGTTGAAATCTTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTACTAGAATGGGTTGTTCTTACTTTGGCATTCTTTTTGAGGTATTATGCTTTTGTGGAAGAAGGGAGCAACAACAATGGTGCGGCTATGAGAAGTGCTAAAGTTCAACAAGATGAGGATTTGAAAGATTGGCCATGGCCTTTTCAAATTTTGGGTGTTTTCAGTGTGGAAACTCCGCACAATTATTCCATAATGCAATCAACCGAAGCTTCCACTTCCATGGAAGTGGAAACAATTTCAACTCAAACAAAAGATGTAGTTAGCACATTACCTCCAAAACCACAGTTCGATCCTCTAAAGCCTCATGAAATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCACCCCATCGTTATTCCCCTCTAAAGAAATCATGGATGGATATTTACACCCCAATTTACGACCAGATGAAAATCGACATCCGAATGAATCTCAAGGCACGGAAAGTCGAGTTGAAAACCAGAGCAGACACACCCGACATTAGTAACTTGCAGAAGTGTGCAGATTTTGTTCATGCTTTCATGCTTGGTTTCGATGTTATTGATGCCATTGCACTCCTACGTGTTGATGAGCTCTATGTCGAGTCTTTTGAGATTAAAGATGTTAAAACGTTGCGAGGCGAGCACTTATCCCGAGCCATTGGTAGACTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCAATCGAAAATGCCACCAAGACGAGGATAGTTATTGCAGATACTAAGATTCACATATTAGGATCCTTTGCAAATATCAAGATTGCTAGGGATTCTCTTTGCAGTCTCATCTTAGGGTCACCTGCTGGAAAAGTTTATTCAAAGCTAAGGGCAGTTACAGCCAGATTGGCAGAAAGGATTCCAATGGCTTACATAAGTTCCGAGAGAGACAATACCGTTGGAGTCAAGCCATCCCCAACGGTGACTAGTTTCTCAGTCAAAGGCCCTAATATAATCGAAGAGTCAATACTCAAGGGCTATATCTTGGATAGTTACGAACGCCGTGAATAA

Coding sequence (CDS)

ATGGGTTTCTCCATAACCTCAACCCCGTCAACCACAATGTCCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAACTACATCCTTCTCGGCGCTGCCTCCAGCTGCATTTTCCTTACTCTCTCCCTCCGTCTCCTCCCTTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCTGCTGCCGTCTCCGGCTGCGCCATGGCTGCTGCTTCCTCGACTCGATGGTTCGGTGTCCACATGGTGTTCACAGTCTTGACAGCGATATTCCAAGGATCAGTAGCGATGCTTGTGTACACAAGAACAGGGGATTTTCTGTCGGAGTTGAAATCTTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTACTAGAATGGGTTGTTCTTACTTTGGCATTCTTTTTGAGGTATTATGCTTTTGTGGAAGAAGGGAGCAACAACAATGGTGCGGCTATGAGAAGTGCTAAAGTTCAACAAGATGAGGATTTGAAAGATTGGCCATGGCCTTTTCAAATTTTGGGTGTTTTCAGTGTGGAAACTCCGCACAATTATTCCATAATGCAATCAACCGAAGCTTCCACTTCCATGGAAGTGGAAACAATTTCAACTCAAACAAAAGATGTAGTTAGCACATTACCTCCAAAACCACAGTTCGATCCTCTAAAGCCTCATGAAATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCACCCCATCGTTATTCCCCTCTAAAGAAATCATGGATGGATATTTACACCCCAATTTACGACCAGATGAAAATCGACATCCGAATGAATCTCAAGGCACGGAAAGTCGAGTTGAAAACCAGAGCAGACACACCCGACATTAGTAACTTGCAGAAGTGTGCAGATTTTGTTCATGCTTTCATGCTTGGTTTCGATGTTATTGATGCCATTGCACTCCTACGTGTTGATGAGCTCTATGTCGAGTCTTTTGAGATTAAAGATGTTAAAACGTTGCGAGGCGAGCACTTATCCCGAGCCATTGGTAGACTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCAATCGAAAATGCCACCAAGACGAGGATAGTTATTGCAGATACTAAGATTCACATATTAGGATCCTTTGCAAATATCAAGATTGCTAGGGATTCTCTTTGCAGTCTCATCTTAGGGTCACCTGCTGGAAAAGTTTATTCAAAGCTAAGGGCAGTTACAGCCAGATTGGCAGAAAGGATTCCAATGGCTTACATAAGTTCCGAGAGAGACAATACCGTTGGAGTCAAGCCATCCCCAACGGTGACTAGTTTCTCAGTCAAAGGCCCTAATATAATCGAAGAGTCAATACTCAAGGGCTATATCTTGGATAGTTACGAACGCCGTGAATAA

Protein sequence

MGFSITSTPSTTMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLKDWPWPFQILGVFSVETPHNYSIMQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERIPMAYISSERDNTVGVKPSPTVTSFSVKGPNIIEESILKGYILDSYERRE*

Homology

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BLAST of Chy6G124470 vs. ExPASy Swiss-Prot
Match: Q9VR89 (RNA-binding protein pno1 OS=Drosophila melanogaster OX=7227 GN=l(1)G0004 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.4e-66
Identity = 122/188 (64.89%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 239 PHEMNDGRVQFRKVSVPPHRYSPLKKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADT 298
           P +    R + RKVSVPPHRYS LK+ WM I+TP+ + MK+ IR N+KAR+VEL+   +T
Sbjct: 53  PPKAKRARSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPET 112

Query: 299 PDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLS 358
           PDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFEIKDVKTLRG+H SRAIGRL+
Sbjct: 113 PDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLA 172

Query: 359 GKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAV 418
           GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV
Sbjct: 173 GKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAVCNLILGSPPSKVYGNLRAV 232

Query: 419 TARLAERI 427
            +RL+ER+
Sbjct: 233 ASRLSERM 240

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BLAST of Chy6G124470 vs. ExPASy Swiss-Prot
Match: Q29IG6 (RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=l(1)G0004 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-64
Identity = 119/179 (66.48%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 248 QFRKVSVPPHRYSPLKKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKC 307
           + RKVSVPPHRYS LK+ WM I+TP+ + MK+ IR N+KAR+VEL+   +TPDI+NLQK 
Sbjct: 60  ELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQKG 119

Query: 308 ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFA 367
           ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG+H SRAIGRL+GK G+TKF 
Sbjct: 120 ADFVKAFLCGFEVDDALALLRLEDLFVETFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFT 179

Query: 368 IENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERI 427
           IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER+
Sbjct: 180 IENVTKTRIVLADSKIHILGSYQNIQLARRAICNLILGSPPSKVYGNLRSVASRLSERM 238

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BLAST of Chy6G124470 vs. ExPASy Swiss-Prot
Match: A7RP64 (RNA-binding protein pno1 OS=Nematostella vectensis OX=45351 GN=pno1 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-64
Identity = 117/195 (60.00%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 231 KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMDIYTPIYDQMKIDIRMNLKARKV 290
           +P F P+K  ++  G+ + RK+ VP HRY+PLK++WM I+TP+ + +K+ IR NL +R V
Sbjct: 43  RPSFPPVKAQKLAGGKSETRKIPVPSHRYTPLKENWMKIFTPVVEHLKLQIRFNLGSRHV 102

Query: 291 ELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHL 350
           E++   +T DI  +QK ADFV AF+LGF+V DA+AL+R+D+L++ESFEI DVK L+G+HL
Sbjct: 103 EIRASKETSDIGAVQKAADFVQAFILGFEVEDALALIRLDDLFLESFEIADVKPLKGDHL 162

Query: 351 SRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGK 410
           SRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  K
Sbjct: 163 SRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGSPPSK 222

Query: 411 VYSKLRAVTARLAER 426
           VY  +RAV +R AER
Sbjct: 223 VYGNMRAVASRSAER 237

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BLAST of Chy6G124470 vs. ExPASy Swiss-Prot
Match: Q6VEU3 (RNA-binding protein PNO1 OS=Danio rerio OX=7955 GN=pno1 PE=2 SV=2)

HSP 1 Score: 246.1 bits (627), Expect = 7.9e-64
Identity = 122/210 (58.10%), Postives = 161/210 (76.67%), Query Frame = 0


Query: 217 ISTQTKDVVSTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMDIYTPIYD 276
           + TQT++  S+ P K P F  L   ++  G  + RKV VP HRY+PLK++W+ I+TPI +
Sbjct: 42  MDTQTEESSSSAPVKRPHFPALSGDQLGGGVDEMRKVPVPSHRYTPLKENWLKIFTPIVE 101

Query: 277 QMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVE 336
            +++ +R NLK R+VE+KT  +T DI  L + ADFV AF+LGF V DA+AL+R+DEL++E
Sbjct: 102 NLQLQVRFNLKTRQVEIKTCKETQDIGALTRAADFVKAFVLGFQVEDALALIRLDELFLE 161

Query: 337 SFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIA 396
           +F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+A
Sbjct: 162 TFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMA 221

Query: 397 RDSLCSLILGSPAGKVYSKLRAVTARLAER 426
           R ++C+LILGSP  KVY  LRAV  R AER
Sbjct: 222 RTAICNLILGSPPSKVYGNLRAVATRSAER 251

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BLAST of Chy6G124470 vs. ExPASy Swiss-Prot
Match: Q5F414 (RNA-binding protein PNO1 OS=Gallus gallus OX=9031 GN=PNO1 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.6e-63
Identity = 117/195 (60.00%), Postives = 155/195 (79.49%), Query Frame = 0


Query: 231 KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMDIYTPIYDQMKIDIRMNLKARKV 290
           +P F PL    +  G+ + RKV VP +RY+PLK++WM I+TPI + +++ IR NLK R V
Sbjct: 47  RPAFPPLPAAALGVGKGEVRKVPVPANRYTPLKENWMKIFTPIVEHLQLQIRFNLKTRNV 106

Query: 291 ELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHL 350
           E+KT ++T D+S L K ADFV AF+LGF V DA+AL+R+D+L++ESFE+ DVK L+G+HL
Sbjct: 107 EIKTCSETKDLSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEVTDVKPLKGDHL 166

Query: 351 SRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGK 410
           SRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  K
Sbjct: 167 SRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGSPPSK 226

Query: 411 VYSKLRAVTARLAER 426
           VY  +RAV +R AER
Sbjct: 227 VYGNIRAVASRAAER 241

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BLAST of Chy6G124470 vs. ExPASy TrEMBL
Match: A0A1S3BLP2 (RNA-binding protein pno1 OS=Cucumis melo OX=3656 GN=LOC103491005 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 220/223 (98.65%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WM+IYTPIYDQMKID+RMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYDQMKIDVRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 426
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. ExPASy TrEMBL
Match: A0A0A0L7D9 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G045150 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 4.6e-115
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQS EASTSM+VETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFDVID
Sbjct: 61  KKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 426
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. ExPASy TrEMBL
Match: A0A6J1EWL7 (RNA-binding protein pno1 OS=Cucurbita moschata OX=3662 GN=LOC111438772 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114
Identity = 215/223 (96.41%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQSTEASTSMEVET+ST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PL
Sbjct: 1   MQSTEASTSMEVETVSTETKNVVSTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYTPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 426
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. ExPASy TrEMBL
Match: A0A6J1HQ98 (RNA-binding protein pno1-like OS=Cucurbita maxima OX=3661 GN=LOC111465109 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 213/223 (95.52%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQ TEASTSMEVET+ST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PL
Sbjct: 1   MQPTEASTSMEVETVSTETKNVVSTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYTPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAF+LGFDVID
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFILGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 426
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. ExPASy TrEMBL
Match: A0A6J1KXN9 (RNA-binding protein pno1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498497 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.9e-113
Identity = 215/223 (96.41%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQSTEASTSMEVE +STQ K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 426
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. NCBI nr
Match: KAE8650098.1 (hypothetical protein Csa_010636 [Cucumis sativus])

HSP 1 Score: 801 bits (2070), Expect = 6.03e-291
Identity = 419/427 (98.13%), Postives = 423/427 (99.06%), Query Frame = 0


Query: 1   MGFSITSTPSTTMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFSITSTPST+M+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
           ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180
           EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180

Query: 181 DWPWPFQ--ILGVFSVETPHNYSIMQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLK 240
           DWPWPFQ  ILGVFSVETPHNYSIMQS EASTSM+VETISTQTKDVVSTLPPKPQFDPLK
Sbjct: 181 DWPWPFQLKILGVFSVETPHNYSIMQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLK 240

Query: 241 PHEMNDGRVQFRKVSVPPHRYSPLKKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADT 300
           PHEMNDGRVQFRKVSVPPHRYSPLKK+WMDIYTPIYDQMKIDIRMNLKARKVELKTRADT
Sbjct: 241 PHEMNDGRVQFRKVSVPPHRYSPLKKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADT 300

Query: 301 PDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLS 360
           PDISNLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLS
Sbjct: 301 PDISNLQKSADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLS 360

Query: 361 GKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAV 420
           GKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAV
Sbjct: 361 GKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAV 420

Query: 421 TARLAER 425
           TARLAER
Sbjct: 421 TARLAER 427

[Close]

BLAST of Chy6G124470 vs. NCBI nr
Match: XP_008449001.1 (PREDICTED: RNA-binding protein pno1 [Cucumis melo])

HSP 1 Score: 431 bits (1109), Expect = 5.12e-148
Identity = 220/223 (98.65%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WM+IYTPIYDQMKID+RMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYDQMKIDVRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 425
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. NCBI nr
Match: XP_004148267.2 (RNA-binding protein pno1 [Cucumis sativus])

HSP 1 Score: 426 bits (1096), Expect = 4.81e-146
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQS EASTSM+VETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFDVID
Sbjct: 61  KKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 425
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. NCBI nr
Match: XP_038904158.1 (RNA-binding protein pno1 [Benincasa hispida])

HSP 1 Score: 426 bits (1095), Expect = 6.83e-146
Identity = 218/223 (97.76%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQS EASTSMEVETISTQTK+VVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSIEASTSMEVETISTQTKNVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WMDIYTPI+DQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH FMLGFDVID
Sbjct: 61  KKAWMDIYTPIFDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHGFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 425
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. NCBI nr
Match: XP_022932417.1 (RNA-binding protein pno1 [Cucurbita moschata])

HSP 1 Score: 425 bits (1093), Expect = 1.37e-145
Identity = 215/223 (96.41%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 203 MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 262
           MQSTEASTSMEVET+ST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PL
Sbjct: 1   MQSTEASTSMEVETVSTETKNVVSTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYTPL 60

Query: 263 KKSWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 322
           KK+WM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 323 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 382
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 383 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 425
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER 223

[Close]

BLAST of Chy6G124470 vs. TAIR 10
Match: AT3G13230.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 350.1 bits (897), Expect = 2.7e-96
Identity = 177/216 (81.94%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 209 STSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKSWMD 268
           ST MEVET +  T      LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKK+W+D
Sbjct: 4   STQMEVETATEGT----VPLPPKPTFKPLKAHEMSDGKVQFRKIAVPPNRYSPLKKAWLD 63

Query: 269 IYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR 328
           IYTPIYDQMK+DIRMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFD+ DAI+LLR
Sbjct: 64  IYTPIYDQMKVDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDIPDAISLLR 123

Query: 329 VDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGS 388
           +DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+
Sbjct: 124 MDELYVESFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTRIHILGA 183

Query: 389 FANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 425
           F+NIK+AR SLCSLI+GSPAGKVYSKLR+V+ARL E
Sbjct: 184 FSNIKVARSSLCSLIMGSPAGKVYSKLRSVSARLNE 215

[Close]

BLAST of Chy6G124470 vs. TAIR 10
Match: AT5G16250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 236.1 bits (601), Expect = 5.8e-62
Identity = 123/189 (65.08%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 1   MGFSITSTPSTTMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGF  +S+P   +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH
Sbjct: 1   MGFISSSSP---VEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
             TIAAAVSGCA A+    RW+  HMV TVLTAIFQGSV++L++T T  FL  LKSYVRE
Sbjct: 61  ATTIAAAVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAM-RSAKVQQDEDL 180
           ED AVILKL GGL +V+F L+W+VL  AFFL+YYA+V+ G   +G AM R+ KVQ +E+ 
Sbjct: 121 EDAAVILKLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDGG---DGVAMKRTGKVQSEENP 180

Query: 181 KDWPWPFQI 189
           KDWPWPFQ+
Sbjct: 181 KDWPWPFQV 183

[Close]

BLAST of Chy6G124470 vs. TAIR 10
Match: AT3G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 223.4 bits (568), Expect = 3.9e-58
Identity = 114/180 (63.33%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 9   PSTTMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAV 68
           P  ++  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAAAV
Sbjct: 7   PQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAAAV 66

Query: 69  SGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVILK 128
           SGCA A+    RW+  HM+ TVLTAIFQGSV++L++T T +FL  L SYVRE++ ++ILK
Sbjct: 67  SGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMILK 126

Query: 129 LAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLKDWPWPFQI 188
           LAGGL VV+F LEW+VL LAFFL+YYA+V +G NN  A  R+ KVQ +E LK+ PW FQ+
Sbjct: 127 LAGGLCVVIFCLEWIVLVLAFFLKYYAYV-DGDNNGVAMKRTGKVQSEETLKNSPWAFQV 185

[Close]

BLAST of Chy6G124470 vs. TAIR 10
Match: AT5G36800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-50
Identity = 115/183 (62.84%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 13  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 72
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 73  MAAAS-----STRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVIL 132
           + A+S     S R +G HMV TVLTAIFQG+V++L++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 133 KLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKV-QQDEDLKDWP-WP 189
           KL+GGL V+MF LEW+VL LAF L+Y  +++E   ++       KV +Q+EDLKDWP +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD----DFKVRRQEEDLKDWPSYP 181

[Close]

BLAST of Chy6G124470 vs. TAIR 10
Match: AT5G36710.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-50
Identity = 115/183 (62.84%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 13  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 72
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 73  MAAAS-----STRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVIL 132
           + A+S     S R +G HMV TVLTAIFQG+V++L++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 133 KLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKV-QQDEDLKDWP-WP 189
           KL+GGL V+MF LEW+VL LAF L+Y  +++E   ++       KV +Q+EDLKDWP +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD----DFKVRRQEEDLKDWPSYP 181

The following BLAST results are available for this feature:

BLAST of Chy6G124470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9VR89	8.4e-66	64.89	RNA-binding protein pno1 OS=Drosophila melanogaster OX=7227 GN=l(1)G0004 PE=2 SV...	[more]
Q29IG6	1.2e-64	66.48	RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=l...	[more]
A7RP64	3.5e-64	60.00	RNA-binding protein pno1 OS=Nematostella vectensis OX=45351 GN=pno1 PE=3 SV=1	[more]
Q6VEU3	7.9e-64	58.10	RNA-binding protein PNO1 OS=Danio rerio OX=7955 GN=pno1 PE=2 SV=2	[more]
Q5F414	6.6e-63	60.00	RNA-binding protein PNO1 OS=Gallus gallus OX=9031 GN=PNO1 PE=2 SV=1	[more]

BLAST of Chy6G124470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BLP2	1.4e-116	98.65	RNA-binding protein pno1 OS=Cucumis melo OX=3656 GN=LOC103491005 PE=3 SV=1	[more]
A0A0A0L7D9	4.6e-115	98.21	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G045150 PE=3 SV=...	[more]
A0A6J1EWL7	1.0e-114	96.41	RNA-binding protein pno1 OS=Cucurbita moschata OX=3662 GN=LOC111438772 PE=3 SV=1	[more]
A0A6J1HQ98	1.1e-113	95.52	RNA-binding protein pno1-like OS=Cucurbita maxima OX=3661 GN=LOC111465109 PE=3 S...	[more]
A0A6J1KXN9	1.9e-113	96.41	RNA-binding protein pno1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Chy6G124470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650098.1	6.03e-291	98.13	hypothetical protein Csa_010636 [Cucumis sativus]	[more]
XP_008449001.1	5.12e-148	98.65	PREDICTED: RNA-binding protein pno1 [Cucumis melo]	[more]
XP_004148267.2	4.81e-146	98.21	RNA-binding protein pno1 [Cucumis sativus]	[more]
XP_038904158.1	6.83e-146	97.76	RNA-binding protein pno1 [Benincasa hispida]	[more]
XP_022932417.1	1.37e-145	96.41	RNA-binding protein pno1 [Cucurbita moschata]	[more]

BLAST of Chy6G124470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13230.1	2.7e-96	81.94	RNA-binding KH domain-containing protein	[more]
AT5G16250.1	5.8e-62	65.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02640.1	3.9e-58	63.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G36800.1	2.3e-50	62.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G36710.1	2.3e-50	62.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 331..404 e-value: 1.7E-4 score: 31.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 330..435 e-value: 2.1E-22 score: 81.0
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 331..427
None	No IPR available	PANTHER	PTHR12826	RIBONUCLEASE Y	coord: 209..425
None	No IPR available	CDD	cd00105	KH-I	coord: 351..397 e-value: 0.00533855 score: 33.6876
IPR039912	Pre-rRNA-processing protein PNO1-like	PANTHER	PTHR12826:SF13	RNA-BINDING PROTEIN PNO1	coord: 209..425

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G124470.1	Chy6G124470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding