Chy6G123730 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G123730
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	30S ribosomal protein S6
Location	chrH06: 22194783 .. 22198060 (+)
RNA-Seq Expression	Chy6G123730
Synteny	Chy6G123730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCTTTACGATGTTATGTTTTTGATGAAACCCCATGTAAAGAAGGAGGCTTTGTTGGACTTGGTTGCTAGAGTGGGCAAGCATGTGTTCAGGAGAAATGGGGTCGTCTGTGACATTAAGTCATTTGGTGTTGTCCAATTGGGTTATGGTATTAAGAAGCTTGATGGAAGATATTATCAGGTGACTTTGAAATCTGTTCTTTCATTTTTTCTCAATGAAAGGTGTTCTTATCAATAAAAGAAAATCTGTTATTTTACTGTTGAAGCTTTTATCATCTTCCTTTTTGTTGTTCCTGTAGCTTGATTGTATCTTTAAATCTTAAATCTCATTCATATTGTGTCAATTAAGCATAAATGCATTTAAGCAACATATACGTTTTTAATTGTATTGTTTCAAAGGTGATAAAAGTGACTTTAGTTGACTTAATGGGTTTGATTAAGAAGGAAGGAATAATAGTTTCTTTTGATTTTGGTTGCATCGAAGGTCTCAGTAAACCTTTATACAAAAGAACTACAAATCATTAAATTGTGGATGCATTTTGCAATATTACTTGTCAATTTTTAATAAGTTAGCTTTTGATGTTGGAATTAATGTCTTTTTTCTTTTTGCGGGTGGGGGAAAAAGGCAGCTTTCGTTGACCATAAATGAAAGAATACAAGGGGAATTCACAAGGAACAGCTGAAGGGTAGCTCAATCAATCTAGAAAAGAGCTTTAGTCAATCAAAATATGGCTAAGGCTCAAAGGAAAATTACAGAAGCCTTTACAAACAAATACCCAAAGATAACTACGAAATTTATTAGCGAACCAAACTCCCTTACAAAATTTTCATTCGCTCTAAGAATTCTATTGTTTCTTTCACTCCAAAGCCCCCAAAATAGCACAAAAACAAGCACAACAAAGTTTGCTACCCTACATCGAATAGGCGAGTGGAACACACACAACTCAAGAAAATCTCTTAATCTCCTAGACTATGCCAAACTAAGAGAGAAAGCCAAAAAAAACCACTTCACAACAATTTAGCTAACTGACAAGACCATATAAGATGATCCAGATCCTCACTAGACACTAAAAAACGACTGACAAGAGAACTCAAATGAAAGACTAGGACTCCAAATCTACCTATTAGTCATTTCCACCAAGAGAGAGTAAAATCACCAAGTAAAGCAAGGAGGGTGAATGACTATTTCATTTCTTTATGGAGACACTGAATGACCTTTGCCTACTTTGAAATAAAAGGAGTACTGCATCTGACACGAATGACTTTCTATGTCAGCATTATATTTTTTTGTGTTTTATTTTAGCCCCAGTGATATTGTCCTTGACATCCTAGAAGTAATGTTATGTGAATTTGTGATTTTCTTTCTTGTGAAGAAATATATGTGTCTCTACAGTTTGAGGCTTCTGTATGTCGACTCTATCTGATGCTTTTCATTGAATCAGTGACCCTTATAGTTCCTCTTGAATGATTGAAAAACTTTTATTAGTTATTGTGGCACACATTTCTTCATTTAGTTAGTGAGTCACAAGGCTACCCATGTTCACCAAGAGGGTTTCTAGTTTGTTGGTTCATTTGTTTAGCTCAAATTTAGCCAATCCAACATGTCCCTGGTTTAAACCTCTTAATTGGTATGGGGTTCAGGTTTTAAAGTTTGGTGGGTTCTGTTTGGAACTGGATTGGATTTGAACAAACTGTCTATAATTGAAGGGAACGCCAATTATCTATAGCCTTAATATATAAGGGTACTTCTACATTAAAAAAATTTCATAGTCTTTGGTAAAGTTCTACTTTGGGGGGCTTAGGATTTAGATGGAACTTAGGTGCTTTTAAAACGTCATAAAGAACAACCAGAGGTTCACGGACATGGAATTTGGACCGGCAATCATAATTCCTCTGCCCATCATCAAAAGTTGCTCATTCATTTCCTTATCCATTAAAATCCTGCTAAAATGAACGTTCGGTTAGTAGTTCTAATTATTATTACATGGCTGAACCAGACACAAGACCTGGAACTACCCATTTTGTAATTTGTATATATCTGGGGAAAAATTTAGGGTCTGGTCACAAACTCAGATATCATCCCAATACAAAGTATTACTGTTGCTACCAACAGTCATCTTTGAGAAGTACTAAAATTTTCTCACAACTGAATTTAAAGATCCAAGGCCGTGTACCACCATTCATAACTTTTTTTGCTGAATTTAACCAACCAGTTGAGCACGCTATATACTTCCTAACAAGAACAATGAATTTATTATAATGCAACTATAAGGAAATACGAGATAAACACAGTTCCAAGGCACTTGGAACCCTCCCTCTATTTATAACAATTTAGTAACCACCCTTGTACAATAACTACCAGTAACTTCCTATCTATCTAATTACTCTCATACCCTTTAACCAACACAAACTACATATCTAGTACCTAATACATGCCCAATCTTGTCACCGATTTTATGCCTTGGAGGTTCTCTCGCGTTGGAAATGCCACTTCTAATGAAGCTTCGGATCTTGAAACTCCGATCACCTAGCCACTTTATTCGGAGGCATAATCATATGATCCTTGTATATTTTTACTAAAGAGCCTGGCTGAATATCGCTTGGGCTACTAGACCTTTCATTTATACACAGTTGGAACTATCAAAAGTGGAAGTCCCTATTCAAACCCTGATGTGCATCATGTACACAATATCTTAAGGGTCGTTTGAAACAAGACTATCCTAAGACTATAATAACTACCTCTACTACAATAAGTACTATTTTGTACTTCCAATTAGTTGCAGTCAACACTATTTCAAAATCCTCATTTGCTACAATATTTACTATTTGCTATAGTTTTTACTATTTTGCATTTATCATTTTTTAATTTTTGTTACTAAGTTATAATCCAACTATAATAACCTAGGACTATAATAGCTAACTTCTTGCTCCAAACGCCCCCGCATTGTTCTTAACTAAAACTTGTTCGTAAGATGTATTGTGAAGTTTCCTGACTTTGTTGTGGTTCCTACAAAAGATTGATCTATTTGTTTGTATGTATATCTAAATAAATTAATGATATTATTACTCTTTCTTTTATGGTAAAGGGCCAACTTATGCAGATGACGATGATGGCTACTCCCAACATGAACAAGGAGTTGTTTTACTTAAACAAGGAGGATCGGTTGTTGCGTTGGATTTTAGTGAAGCACCGTGACAGACAATTTGGCCTGGAATTCCTTAGCGAAGATGATGACAAGAATGGACTCGAAAAATTAAGTCGACTTAACTTGATGG

mRNA sequence

ATGCCTCTTTACGATGTTATGTTTTTGATGAAACCCCATGTAAAGAAGGAGGCTTTGTTGGACTTGGTTGCTAGAGTGGGCAAGCATGTGTTCAGGAGAAATGGGGTCGTCTGTGACATTAAGTCATTTGGTGTTGTCCAATTGGGTTATGGTATTAAGAAGCTTGATGGAAGATATTATCAGGGCCAACTTATGCAGATGACGATGATGGCTACTCCCAACATGAACAAGGAGTTGTTTTACTTAAACAAGGAGGATCGGTTGTTGCGTTGGATTTTAGTGAAGCACCGTGACAGACAATTTGGCCTGGAATTCCTTAGCGAAGATGATGACAAGAATGGACTCGAAAAATTAAGTCGACTTAACTTGATGG

Coding sequence (CDS)

ATGCCTCTTTACGATGTTATGTTTTTGATGAAACCCCATGTAAAGAAGGAGGCTTTGTTGGACTTGGTTGCTAGAGTGGGCAAGCATGTGTTCAGGAGAAATGGGGTCGTCTGTGACATTAAGTCATTTGGTGTTGTCCAATTGGGTTATGGTATTAAGAAGCTTGATGGAAGATATTATCAGGGCCAACTTATGCAGATGACGATGATGGCTACTCCCAACATGAACAAGGAGTTGTTTTACTTAAACAAGGAGGATCGGTTGTTGCGTTGGATTTTAGTGAAGCACCGTGACAGACAATTTGGCCTGGAATTCCTTAGCGAAGATGATGACAAGAATGGACTCGAAAAATTAAGTCGACTTAACTTGATGG

Protein sequence

MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYYQGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSRLNLMX

Homology

[Close]

BLAST of Chy6G123730 vs. ExPASy TrEMBL
Match: A0A0A0L2X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073850 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY
Sbjct: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFL EDDDKNGLEKLSR
Sbjct: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLGEDDDKNGLEKLSR 120

Query: 121 LNLM 125
           LNLM
Sbjct: 121 LNLM 124

[Close]

BLAST of Chy6G123730 vs. ExPASy TrEMBL
Match: A0A1S3BLC8 (30S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103491085 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.1e-60
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYDVM LMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY
Sbjct: 1   MPLYDVMLLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQ+GLEFLSEDDDK+G  + SR
Sbjct: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQYGLEFLSEDDDKSGPGQFSR 120

Query: 121 LNLM 125
           LNLM
Sbjct: 121 LNLM 124

[Close]

BLAST of Chy6G123730 vs. ExPASy TrEMBL
Match: A0A6J1KXT7 (uncharacterized protein LOC111498530 OS=Cucurbita maxima OX=3661 GN=LOC111498530 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.9e-53
Identity = 104/124 (83.87%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M LMKPHV+KEALLDLVARVGKHVFRRNGVV D+KSFGVVQLGYGIKKLDGRY+
Sbjct: 1   MPLYDCMLLMKPHVRKEALLDLVARVGKHVFRRNGVVTDVKSFGVVQLGYGIKKLDGRYF 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKEL YLNKEDRLLRW+LVKHRD ++GLEFLSEDD KN L K  R
Sbjct: 61  QGQLMQMTMMATPNMNKELHYLNKEDRLLRWLLVKHRDTKYGLEFLSEDDGKNELNKFPR 120

Query: 121 LNLM 125
            +++
Sbjct: 121 FSMI 124

[Close]

BLAST of Chy6G123730 vs. ExPASy TrEMBL
Match: A0A6J1FEF6 (uncharacterized protein LOC111443208 OS=Cucurbita moschata OX=3662 GN=LOC111443208 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.9e-53
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M LMKPHV+KEALLDLVARVGKHVFRRNGVV DIKSFGVVQLGYGIKKLDGRY+
Sbjct: 1   MPLYDCMLLMKPHVRKEALLDLVARVGKHVFRRNGVVTDIKSFGVVQLGYGIKKLDGRYF 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKEL YLNKEDRLLRW+LVKHRD ++GLEFLSEDD KN L K  R
Sbjct: 61  QGQLMQMTMMATPNMNKELHYLNKEDRLLRWLLVKHRDTKYGLEFLSEDDGKNELNKFPR 120

Query: 121 LNLM 125
             ++
Sbjct: 121 FKMI 124

[Close]

BLAST of Chy6G123730 vs. ExPASy TrEMBL
Match: A0A6J1CN79 (uncharacterized protein LOC111013137 OS=Momordica charantia OX=3673 GN=LOC111013137 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.5e-53
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M LMKPHVKKEALLDLVARVGKHVFRRNGVV DIKSFGVVQLGYGIKKLDGR+Y
Sbjct: 1   MPLYDCMLLMKPHVKKEALLDLVARVGKHVFRRNGVVTDIKSFGVVQLGYGIKKLDGRFY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKEL YLNKEDR+LRW+LVKHRD ++GLEFLSEDD K  L K  R
Sbjct: 61  QGQLMQMTMMATPNMNKELHYLNKEDRMLRWLLVKHRDTKYGLEFLSEDDVKGELSKFPR 120

Query: 121 LNLM 125
           + +M
Sbjct: 121 IGIM 124

[Close]

BLAST of Chy6G123730 vs. NCBI nr
Match: XP_011650517.1 (uncharacterized protein LOC101218568 [Cucumis sativus] >KGN56093.1 hypothetical protein Csa_010447 [Cucumis sativus])

HSP 1 Score: 253 bits (646), Expect = 2.06e-84
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY
Sbjct: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFL EDDDKNGLEKLSR
Sbjct: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLGEDDDKNGLEKLSR 120

Query: 121 LNLM 124
           LNLM
Sbjct: 121 LNLM 124

[Close]

BLAST of Chy6G123730 vs. NCBI nr
Match: XP_008449133.1 (PREDICTED: 30S ribosomal protein S6 [Cucumis melo] >XP_008449134.1 PREDICTED: 30S ribosomal protein S6 [Cucumis melo])

HSP 1 Score: 241 bits (614), Expect = 1.46e-79
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYDVM LMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY
Sbjct: 1   MPLYDVMLLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQ+GLEFLSEDDDK+G  + SR
Sbjct: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQYGLEFLSEDDDKSGPGQFSR 120

Query: 121 LNLM 124
           LNLM
Sbjct: 121 LNLM 124

[Close]

BLAST of Chy6G123730 vs. NCBI nr
Match: XP_023539684.1 (uncharacterized protein LOC111800294 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220 bits (561), Expect = 1.87e-71
Identity = 106/124 (85.48%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M LMKPHV+KEALLDLVARVGKHVFRRNGVV DIKSFGVVQLGYGIKKLDGRY+
Sbjct: 1   MPLYDCMLLMKPHVRKEALLDLVARVGKHVFRRNGVVTDIKSFGVVQLGYGIKKLDGRYF 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKEL YLNKEDRLLRW+LVKHRD ++GLEFLSEDD KN L K  R
Sbjct: 61  QGQLMQMTMMATPNMNKELHYLNKEDRLLRWLLVKHRDAKYGLEFLSEDDGKNELNKFPR 120

Query: 121 LNLM 124
            N++
Sbjct: 121 FNMI 124

[Close]

BLAST of Chy6G123730 vs. NCBI nr
Match: XP_038905169.1 (uncharacterized protein LOC120091279 [Benincasa hispida])

HSP 1 Score: 219 bits (559), Expect = 3.90e-71
Identity = 105/124 (84.68%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M LMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKL+GRYY
Sbjct: 1   MPLYDCMLLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLEGRYY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPN+NKEL YLNKEDRLLRW+LVKHRD ++GLEFLSE+D K+ L K  R
Sbjct: 61  QGQLMQMTMMATPNVNKELHYLNKEDRLLRWLLVKHRDTKYGLEFLSEEDGKSELGKFPR 120

Query: 121 LNLM 124
           L+++
Sbjct: 121 LDML 124

[Close]

BLAST of Chy6G123730 vs. NCBI nr
Match: XP_023005590.1 (uncharacterized protein LOC111498530 [Cucurbita maxima])

HSP 1 Score: 218 bits (555), Expect = 1.39e-70
Identity = 104/124 (83.87%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M LMKPHV+KEALLDLVARVGKHVFRRNGVV D+KSFGVVQLGYGIKKLDGRY+
Sbjct: 1   MPLYDCMLLMKPHVRKEALLDLVARVGKHVFRRNGVVTDVKSFGVVQLGYGIKKLDGRYF 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLEFLSEDDDKNGLEKLSR 120
           QGQLMQMTMMATPNMNKEL YLNKEDRLLRW+LVKHRD ++GLEFLSEDD KN L K  R
Sbjct: 61  QGQLMQMTMMATPNMNKELHYLNKEDRLLRWLLVKHRDTKYGLEFLSEDDGKNELNKFPR 120

Query: 121 LNLM 124
            +++
Sbjct: 121 FSMI 124

[Close]

BLAST of Chy6G123730 vs. TAIR 10
Match: AT3G18760.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.5e-41
Identity = 76/102 (74.51%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M L KP ++KE L+DLVAR+GKHV+ RNGV+ +IKSFG V+LGYGI+KLDGR+Y
Sbjct: 1   MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFG 103
           QGQLMQ+TMM TPNMNKEL YLNKED+LLRW+LVKHRD + G
Sbjct: 61  QGQLMQITMMTTPNMNKELHYLNKEDKLLRWLLVKHRDIKIG 102

[Close]

BLAST of Chy6G123730 vs. TAIR 10
Match: AT3G18760.2 (Translation elongation factor EF1B/ribosomal protein S6 family protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-36
Identity = 71/102 (69.61%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 1   MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
           MPLYD M L KP ++KE L+DLVAR+GKHV+ RNGV+ +IKSFG V+LGYGI+KLDGR+Y
Sbjct: 1   MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60

Query: 61  QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFG 103
                Q+TMM TPNMNKEL YLNKED+LLRW+LVKHRD + G
Sbjct: 61  -----QITMMTTPNMNKELHYLNKEDKLLRWLLVKHRDIKIG 97

The following BLAST results are available for this feature:

BLAST of Chy6G123730 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G123730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2X6	1.4e-63	99.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073850 PE=3 SV=1	[more]
A0A1S3BLC8	7.1e-60	94.35	30S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103491085 PE=3 SV=1	[more]
A0A6J1KXT7	4.9e-53	83.87	uncharacterized protein LOC111498530 OS=Cucurbita maxima OX=3661 GN=LOC111498530...	[more]
A0A6J1FEF6	4.9e-53	84.68	uncharacterized protein LOC111443208 OS=Cucurbita moschata OX=3662 GN=LOC1114432...	[more]
A0A6J1CN79	6.5e-53	84.68	uncharacterized protein LOC111013137 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Chy6G123730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650517.1	2.06e-84	99.19	uncharacterized protein LOC101218568 [Cucumis sativus] >KGN56093.1 hypothetical ...	[more]
XP_008449133.1	1.46e-79	94.35	PREDICTED: 30S ribosomal protein S6 [Cucumis melo] >XP_008449134.1 PREDICTED: 30...	[more]
XP_023539684.1	1.87e-71	85.48	uncharacterized protein LOC111800294 [Cucurbita pepo subsp. pepo]	[more]
XP_038905169.1	3.90e-71	84.68	uncharacterized protein LOC120091279 [Benincasa hispida]	[more]
XP_023005590.1	1.39e-70	83.87	uncharacterized protein LOC111498530 [Cucurbita maxima]	[more]

BLAST of Chy6G123730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18760.1	2.5e-41	74.51	Translation elongation factor EF1B/ribosomal protein S6 family protein	[more]
AT3G18760.2	1.1e-36	69.61	Translation elongation factor EF1B/ribosomal protein S6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000529	Ribosomal protein S6	PFAM	PF01250	Ribosomal_S6	coord: 4..95 e-value: 5.2E-15 score: 55.5
IPR000529	Ribosomal protein S6	PANTHER	PTHR21011	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	coord: 1..113
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	3.30.70.60		coord: 1..118 e-value: 6.3E-16 score: 60.2
None	No IPR available	PANTHER	PTHR21011:SF14	SUBFAMILY NOT NAMED	coord: 1..113
None	No IPR available	CDD	cd15465	bS6_mito	coord: 3..96 e-value: 6.41422E-23 score: 83.7361
IPR035980	Ribosomal protein S6 superfamily	SUPERFAMILY	54995	Ribosomal protein S6	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G123730.1	Chy6G123730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding