Chy6G122490 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G122490
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	U3 small nucleolar RNA-associated protein 14 B isoform 1
Location	chrH06: 20101097 .. 20104271 (+)
RNA-Seq Expression	Chy6G122490
Synteny	Chy6G122490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAATCCAAGTGGGCTTCGTTTGAGGCTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTGATTGTTTCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGATGGGGAAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGGTCTGTATTCTTCTTCTTCTTCTTCTCCCTTTCTCTCTCTGCTTCTGCTTTTGTTTCTGGAGTTTAAGATCTGTTTTTTCTCTTTGGAAAATTGGGTGAAATGTGCTTGATTTGCTTGTGTTAAGCAGTTTTAGTTTTAGTGATTATTGATGAACATTTGAATGACACTATACTTTTACTTGCTTTTTTGTTTTAATTTTGCTGGTATTATCACTTCTGCGTTCAACGTAGTCCATTTGTCTTATTAAGACAATAAGATCCTCTGCATGTCTCAAAGATGGTGGGTTCACCAATCTTGTATAGAAAATTCAATTTTTGTTTTTGGATTGATTATCAAAATCACTTAATTTACCTAAAAACTTAAACTAAAGAAGTGATAATTTAATTATATCAACACTTTAACAATCCCTATAACTAGTTCTTATTCTGGATTTCTTAAACTTTCAAAAGAAACATAGAAATTAAAAGAAACATAGAAATTTTCCTTTTAGGTGTGATGGAAGGGGAAGGGGAAGGGAGCTTTTCCACCTTACATTAGAGGGCATTTTCTTTGATAGTTGTGAAGAGTAAAATGAGAATGGTTAGATATTATATTAAATTTATCATTACCTACTAATTTAAGCTTTGAAGTGAATGGGTGATTTAAGAACCATAAGGATATATAGCATTCTTGAAGAGAGGTTGATTGAGAGAGTGTGGGTCACTTCAATCCCTCCCTTTAGATATATGCTATCGAGTTCTTTTATAAAATTTAGTTTTGTTTTGGATGGAGTATCTCCTTTCTGAAGTTTAGTTGTGTTTTTGGATGGAATATCTTTGATTTGCTTCATCTGGCTCAGGCTTTGAAAACTGGTTTCTAGTGGGAGAAAAATGTGTGTATGTAGCTCTCTTTTGTTTGGATTCAAGAACCGATGGAAGATGAATTCCTTTTTGTTTTAGCTTTTAGAGCCTTGGTTTAATCTGTTAACATATATGGCTATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATGTTAGTCGTTATTATATCTTTTGCATTTTCAACCTCAAATCTGAACTATAATGTTAGTCTTTATTATATCTTTTGCATTTTCAACCTCAAATCTTGAGCTTATGTAACTTCTAAATGACATACCGTCACTTCTTATCTTGCATTTGCAGTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAATAACTCGTTTGAGGAGATTACTCCATTTTGAAATGATTAGCACACTTCATTTACATCCATATTGCAGATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGGTAAATCCCAAATTTTAATAGATCCTAAGTTCTTATTGTTGTTGGATTGTAAACTGTTAGTTTATCATGGTTTGGTTTGCTTCGTTTTCCTTTTCCTTATATGCAAGAACATCGAATACTGCATAACTTCTTATTTATTTGTGTATATTGATTCTTCCTTCACAAATTCAGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAATGACTTTACTTCTCCAAGAAAAGGTAAGATTCTTCCTGGACTAATCAATCTTCCCGCCCCCCAAAGAAATATTTAACCTACTCGAAACCCAACCACCTCTTGTGATTGATTGAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTTAAAGATGTGGACTGAACTCGTCTTGGTAAGCGATTGATTGCCTTAAGATAAAAGTAAGTGTTCAAATAGCATGCTTACACTTGTGTTTGCCAGATTGAATTACAGTTAGTATTCTTCAGAAGCACATCAAATTTAGGGGGACAAGTTCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAAGTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGAAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTGTATATTGATTTTGATACAAGTCTAAGGTACAATCTTTACTCTGTATCTAATAAAGACTAATGGACTACAACATAAACTCTTTGCTTATTTGCGTCAAACATTGGAAAAGTCACCTTTTTGGATACCTTTTTTATTTTTATATACTTGAGGATATCGTCTCGAAAACCCGAGAAGCTAGTGTCTTCCATCTCCAACTTTCTGCAGGAGAGAACAGAGGCAAGTTAGACCAACAACGTCTAAGCCATTCAAACAATAATATGCAGAGAAAAAGAAAGGTTAGTATTGATCTTTTTAAATCACATTTTCTTCCAACATATTGGAGAGTTTTACAGATAAATACTGACTGGCTCTTAAAGTTATTAATCATATCCAGCCAATGTTGGATTTAGACAAAATTGAAGGAAAAGAATTTTACTAGACCTAGACATAAATTTAAATGTATATGTAATGGATCAATTTTAAAATGTCTCAAATTTTCAACCAAGGTTAGTTTTCTTTAGCTGCTTCTTCTGTAATAGGAGGAGTTCACAGGGCATTCTAATTTCAAACCTGCAAATGAAAAGAGAGGAAGACTATTATTCTGTTTACAGACGAGAAATGGAAGATTCTCAGGTAAGGGCAAAGATTGTAGCTAAGAATGTCTCTACTCTATGCTGTCTCCCCATCTGGTTGAAGCAGGGATGA

mRNA sequence

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAATCCAAGTGGGCTTCGTTTGAGGCTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTGATTGTTTCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGATGGGGAAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAATGACTTTACTTCTCCAAGAAAAGAAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTGTATATTGATTTTGATACAAGTCTAAGGAGGAGTTCACAGGGCATTCTAATTTCAAACCTGCAAATGAAAAGAGAGGAAGACTATTATTCTGTTTACAGACGAGAAATGGAAGATTCTCAGGTAAGGGCAAAGATTGTAGCTAAGAATGTCTCTACTCTATGCTGTCTCCCCATCTGGTTGAAGCAGGGATGA

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAATCCAAGTGGGCTTCGTTTGAGGCTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTGATTGTTTCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGATGGGGAAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAATGACTTTACTTCTCCAAGAAAAGAAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTGTATATTGATTTTGATACAAGTCTAAGGAGGAGTTCACAGGGCATTCTAATTTCAAACCTGCAAATGAAAAGAGAGGAAGACTATTATTCTGTTTACAGACGAGAAATGGAAGATTCTCAGGTAAGGGCAAAGATTGTAGCTAAGAATGTCTCTACTCTATGCTGTCTCCCCATCTGGTTGAAGCAGGGATGA

Protein sequence

MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQRVFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEICEMPSLLYIDFDTSLRRSSQGILISNLQMKREEDYYSVYRREMEDSQVRAKIVAKNVSTLCCLPIWLKQG*

Homology

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BLAST of Chy6G122490 vs. ExPASy TrEMBL
Match: A0A0A0L5A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 3.2e-125
Identity = 225/238 (94.54%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFC PSGLRLR YGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIV+RFNQGFGFNGGGGDGGDGGDGGDDG TARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 239
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDI 238

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BLAST of Chy6G122490 vs. ExPASy TrEMBL
Match: A0A5A7TVG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001050 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 5.0e-115
Identity = 212/238 (89.08%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV CNPSGLRLR YG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIV+RFNQGFGFNGG      GGDGGDDG TARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 239
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDI 232

[Close]

BLAST of Chy6G122490 vs. ExPASy TrEMBL
Match: A0A1S3BUA7 (uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 5.0e-115
Identity = 212/238 (89.08%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV CNPSGLRLR YG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIV+RFNQGFGFNGG      GGDGGDDG TARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 239
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDI 232

[Close]

BLAST of Chy6G122490 vs. ExPASy TrEMBL
Match: A0A6J1JCT5 (uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 7.3e-98
Identity = 191/239 (79.92%), Postives = 206/239 (86.19%), Query Frame = 0


Query: 1   MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQ 60
           MTSFIRFS+FN +LH+NF  KPT+FNPLPPPKV  C+ +G RLRL G +L F  GGW ++
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLT 120
            V GK+G FKGKRG LIV+RFNQGFGFNGGG     GG GGDDG TARL+GNIALAAGLT
Sbjct: 61  GVLGKYGVFKGKRG-LIVARFNQGFGFNGGG-----GGGGGDDGATARLLGNIALAAGLT 120

Query: 121 YLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTL 180
           YLSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTL
Sbjct: 121 YLSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTL 180

Query: 181 NEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 239
           NEELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 NEELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDI 233

[Close]

BLAST of Chy6G122490 vs. ExPASy TrEMBL
Match: A0A6J1CP68 (uncharacterized protein LOC111012900 OS=Momordica charantia OX=3673 GN=LOC111012900 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 7.3e-98
Identity = 187/238 (78.57%), Postives = 204/238 (85.71%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTS IRFSTFNILH++FC KPT+F+PLP  KV FCN +G RLR YGWRL F GG   ++ 
Sbjct: 1   MTSIIRFSTFNILHDHFCKKPTRFSPLPARKVGFCNRNGFRLRAYGWRLTFLGGSCGNEG 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           +FGK  GFKG+RG LIV+RFNQGFGFNGGG     GG GGDDG TAR++GNIALA GLTY
Sbjct: 61  IFGKDLGFKGRRG-LIVARFNQGFGFNGGG-----GGGGGDDGATARILGNIALAVGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQ  CPNCGN+FQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQGTCPNCGNDFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 239
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAF++FTSP+K    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSNFTSPKKGKETSAAVVDI 232

[Close]

BLAST of Chy6G122490 vs. NCBI nr
Match: XP_004149291.1 (uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical protein Csa_010420 [Cucumis sativus])

HSP 1 Score: 457 bits (1177), Expect = 1.03e-160
Identity = 225/238 (94.54%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFC PSGLRLR YGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIV+RFNQGFGFNGGGGDGGDGGDGGDDG TARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 238
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDI 238

[Close]

BLAST of Chy6G122490 vs. NCBI nr
Match: XP_008452285.1 (PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 uncharacterized protein E6C27_scaffold230G00230 [Cucumis melo var. makuwa] >TYK03278.1 uncharacterized protein E5676_scaffold298G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 423 bits (1088), Expect = 2.98e-147
Identity = 212/238 (89.08%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV CNPSGLRLR YG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIV+RFNQGFGFNGGGGDGGD      DG TARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGD------DGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 238
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDI 232

[Close]

BLAST of Chy6G122490 vs. NCBI nr
Match: XP_038905451.1 (uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_038905452.1 uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida])

HSP 1 Score: 368 bits (944), Expect = 2.52e-125
Identity = 194/238 (81.51%), Postives = 204/238 (85.71%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFST NILH++FCNKPTKFNPLP PKV   + +G RLR+YG RL F      + R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           VFGKHGG KGKRG LIV+RFNQGFGFNGGGG GG    GGDDG TARL+GNIALA GLTY
Sbjct: 61  VFGKHGGSKGKRG-LIVARFNQGFGFNGGGGGGG----GGDDGATARLLGNIALAVGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 238
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAF DFTSP+K    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFGDFTSPQKGKETSGAVVDI 233

[Close]

BLAST of Chy6G122490 vs. NCBI nr
Match: KAG7015466.1 (hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367 bits (942), Expect = 5.08e-125
Identity = 190/238 (79.83%), Postives = 204/238 (85.71%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C+ +G RLRL   +L F  GGW +  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCRGKLPFLSGGWGNNG 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           V GK+G FKGKRG LIV+RFNQGFGFNGG    G GG GGDDG TARL+GNIALAAGLTY
Sbjct: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGG----GSGGGGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 238
           EELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDI 233

[Close]

BLAST of Chy6G122490 vs. NCBI nr
Match: XP_023552443.1 (uncharacterized protein LOC111810103 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (942), Expect = 5.08e-125
Identity = 189/238 (79.41%), Postives = 205/238 (86.13%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCNPSGLRLRLYGWRLLFPGGGWVDQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C+ +G RLRL G +L F  GGW +  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCGGKLPFLSGGWGNNG 60

Query: 61  VFGKHGGFKGKRGRLIVSRFNQGFGFNGGGGDGGDGGDGGDDGETARLVGNIALAAGLTY 120
           V GK+G FKG+RG LIV+RF+QGFGFNGG    G GG GGDDG TARL+GNIALAAGLTY
Sbjct: 61  VSGKYGVFKGRRG-LIVARFDQGFGFNGG----GSGGGGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFNDFTSPRKEISNSETTVEI 238
           EELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAF+DFTSPRK    S   V+I
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDI 233

[Close]

BLAST of Chy6G122490 vs. TAIR 10
Match: AT4G27390.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 198.7 bits (504), Expect = 6.6e-51
Identity = 93/139 (66.91%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 98  DGGDDGETARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAG 157
           +GGD+    R++GN+ALA GLTYLS+TGQLGW+LDAIVS+WL+ V+VPI+G+ AF WWA 
Sbjct: 87  NGGDNNGNGRILGNLALAIGLTYLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQ 146

Query: 158 RDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQ 217
           RDIVQSNCPNCGNEFQIFKS +++E+QLCPFC+QPFSVVDDKFV++ VKFSN+T++ FGQ
Sbjct: 147 RDIVQSNCPNCGNEFQIFKSAMDDEVQLCPFCTQPFSVVDDKFVKEPVKFSNQTTA-FGQ 206

Query: 218 AFNDFTSPRKEISNSETTV 237
             N F+S  K+   S T V
Sbjct: 207 DLNGFSSKPKKGKGSSTAV 224

The following BLAST results are available for this feature:

BLAST of Chy6G122490 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G122490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5A4	3.2e-125	94.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1	[more]
A0A5A7TVG5	5.0e-115	89.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUA7	5.0e-115	89.08	uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=...	[more]
A0A6J1JCT5	7.3e-98	79.92	uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302...	[more]
A0A6J1CP68	7.3e-98	78.57	uncharacterized protein LOC111012900 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Chy6G122490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149291.1	1.03e-160	94.54	uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical ...	[more]
XP_008452285.1	2.98e-147	89.08	PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 unc...	[more]
XP_038905451.1	2.52e-125	81.51	uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_03890545...	[more]
KAG7015466.1	5.08e-125	79.83	hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552443.1	5.08e-125	79.41	uncharacterized protein LOC111810103 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy6G122490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27390.1	6.6e-51	66.91	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36785	OS05G0502500 PROTEIN	coord: 9..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G122490.1	Chy6G122490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane