
Chy6G122320 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGCCATAGTCCATCTACCCCTATCCTACGATGCCACCACTGCCGCCACCTACCCTGTCTCTTTCTATATGTAATTTTTTTAGTTAGATTATTAATTTTGACCTAAAATCTCTTTGTTCTTTGAAATCCATTGTTCCCTAAAATTACTTTGTTTTAAGAATTTGTTTGATGAATAATTGATTATAGAAGTTGACCTAAAAACCTCCCATAGAAATTATTGAATTGTTGCTGTGTCTAGCTTTGTTTGGTTTGAGAATCTCCCTAATTTTACTCGGGATGATTTTATGGGAGTTGAGTTTAATATAAGTTTTTATGATTATTCTAAAGAAAAAATGCCATTGAGGAAGGACTTTAGTTTAAGCTTTGGAGATTGTTAATTTGATTTGGACAAAATCTTTAAAAAAATGTCATTGTTGTGGAAGTTCAAAAAATGAAAAAATTAACCATAAAATAGGATGGAAAAAGTGGCTCTTTGCTTACACTCTTATAAATCAAGTTTTAATGTGTTGAGGAAGAATTAACTTGGAAATCATATTGGTGAGCTTAAGTTTTAGTGTTGCACTTGCAAAATGAAAAATGAAGAATTTTGTTATGTAATTTAAAGATTGTTATGAACTGAGATGTGGAAAAACTAAATTAATCACTTGTCTTATACTTCAATGAAAGACTTTGGAAACTGAATTAATCATTCATTGTGCTTATTGGTTTTGGTGTAGTATTTAGGTCTGAAATCAGTATTTTTGAAAGTGCATAGAGTGTCACACTAAAACACAATAGTCATTGAGAACTTATAAGTGTGAGATCTAAATTTTTTTTCTAGGAAAATTAAAGTTAGAGAACAACTCTATGGGAGTGTTTGACGCATAGGTTCAGAATCAAATGAGATCAATAGGATCTTGTCATGCTTAAATAAGAAATAAAATGTATTAAAAACAAAAGGTGCTAGAAAATAAACAACAAGATTATGTTAACAAAAATTTACTTGGAATGCTTGTGAAAATTAAACTACGAAACGAGTATTTAATGACATAAGTTTTATTCTTTTTTACATTCTTCTTGTACGTGCCAACTCTTTCAGTCAATGCAGCCTCAAGGGCGTTGAGTGTTCTTTTCCAAATAAAGGTACCTCAGTCTAGACGATTGAAGTACTTAATGTTCTCGACATTGTTGAACATTTGAAGTTTAAATACACTTTTCTATTTGTTCTTCCTCGTCATTAGAATCTCTATTTATATAGTATATTAGAGTGATATTTCCATCATCGTCATCATTTTCAAACTCCCAAATCCTTATACTTTTCTCCTAAGCTATTGATGTGGAATGAGGTCATGATTGCTTACCAAAGTACTTTATTAGAAGTTAAAGTGATGACTCATGATCATGATCACCTGGCATGGGAAATCGCCACAAGTCATTAATAGAAAATCAACCTTAGAAAAAGTGACAATTTTTCCACCAACTCAAAATATAGTCAGACTTGCACCACGAAGATTAAACTCAGTTCGGGTAAAATTGATTTGTAAAACGTAGGTATAAGGGAAAGCTGGAAATAGATTGAGTGATTTCAAAGAGAGCGAGATGGTTGGAATGTGGAATACTGAGATGAGCGAAACAAAGTCGTTTCATTTTCGGTGTTTTTGTTTCGCAAAAGGTTAGGGCAATTTGGTAATTTCATTTTCTAAGTGGAGTATCAATTGGCATTTTCTAAAGAAAAAGGGTCATTTCCCAAATTGGACCGATCGAATGGGTCATACATACAAATTCACCAAAACAATCGTGGATTCTTTTCTTTTCTATATCTATTTCAGTATTTCTAATTCCCCAGCTACTGCATCCCCTCCGCCGCACGCAGCAGTCCGCCGCCGCCCATCCTACCTGAAACAGTCTCACCGTCTGCACCCACCTTCTGAACGTACTCGCCCGCATCTCTCTCCCTCTCACACTCTCACCTCTCCCTGAAATCGCAGTTATTTAAACTCTCTCAGTCCCCAACCCCTGCTGTTGGTAAGATCGCGCCACCCCTCATTTTTCTTATCCACCCTAGTGTTTTCCTTCTTTCTTTTCTCTTTTTGTTGTTTCATTGATTTATTCTCTTCACCCGCCTAGTATAAAATCAAAATTAGTATGATTATTGTTATAATTATTTTGTTGATTTCTTCTTCCACCAATGTTCAGTCAATCCAAATGAAAACATTAAAAATAAAATGCTTCAGAGTTTTCTTGAATATAGAACAAACTATCGAGGGATAACTGGTGTGAGGAGGCGTATAGTTCTTTCTTGAATATAGAAGAATCATTTGAAATTGTCCCAAATTCAGGGGTTCCAATTAGTAAAACCTAAAACTTGAACCTATGTTCTTTGACCCTTTTGGAGGCTCGATTCTCTGAGTGTTATAACTGTTAAAATTAGCTATTTGCTCAATGTTTGCAGAAGGATATGGGAGGCAGAGGAGTCATTGGTGACAAATGGTCCATGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTAAGCACTTTTAGTTTTGACATGTTTGGGAGTGATTTTTTGAAATGGTTTAAATCATGTAATCCCTCTTCAACGTGTTTTTAGTCTTTCAAAATCAATTTTGACAGTATGAAATTTGTAAGATCAAATGTTTGATTGATTTGAATGATTAAATGCATGTTTGAAGTAATTTTCAATTTGCTTATAGCATGATGTTTTTTTATTCCGGCAAAGTGGAACTCTTCTCTACTTTTAATAAATTCTAGGGTTCTTTGAGGTGATGTCAGGACTTAAAATTAATATAAAAGCCAGATTTTGGGTATAAAGTAGGAAAAGCTTAATAGATGCGCGAATTTGGTTGGTTGTGATTTGTGACTTGGTTCCTTTCCTTCTTCCTACCTTGGTCTCCCCCTCCAGGGTAATACGAGAGCTATCCCTTTCTGGGATGCTTCATGGAGAAGATAAGGAAGAGGTTAGCTTCATGGAAAAAAAAAAAATCTTCTCTAAAGTTGGGAGGTTGATGCTTATTAGATTGGGATTGGGGGGGAGCTTGAAAATTCAAGGTTACGCAACAAAGCTCTGTTATTTAAATGGTTGTGAGCCTGAATTCTTGTGGCAAAGGTTTATTGTGAGCAAACATGGTCACCATCCCTTTGAGTGGGTGGCGAAAGGGGTCAAAGGCACACACCAAAATTTTTGGAAAGATATTGCTATTCAACTCCCTTCTTTTTTCTATCTTGTCATTTGTGTTGTGGGAGATTGGAAGAAAACATTTTCTTTTTTTGGGAAGATCATTAGTTGGGGGATATCCCTTCTCATTTTTGTTTTCTGGGTTATATCATTTGTTCACTCTGAAAAATTGTCTTGTATCGGACTTTTTTATTTGGTTGGGAAATTCTGTTTCTTTCTCTTTTGGTTTCTGTCAGTCATTGTCCAATAGGGAAACGATGGAGGTGGGCTCTCTTATTCCCAATTGTGGGTTTTGACTATAGGCTGAGAGAAGGGATGTTCGTGTATGGACTTCTAACCCTTTAGAGGGCTTTTATTGTAAGTCATTCTTTAGGATTTTATTAGATCTCTCTCCTGTGGTTGAGTCGGTCTTTGATGTTTTCTTCATGAAGGATTAAGATTCCAAAGAAAGACAAGTTCTTTTTGTATCAAGTTTTGCTTGGTCGTGTGAATACGATGGATAGGCTTTTGAGAAAGATGCCTTTGTTGATGGGTTGTTCTTGATGTATCCTTTGTCATAAAGCAGATGGAAATGTGGATCACTTTATATATGAATGTCAGTTTGTGAGATCTATTTTGGACAGTTTTTTGCAGGAATTTGTTTTTTACTGTTTGTCAGAGGAATGCTCGGTTAGTGATTGTGGAGTTCTCCTCCATTGGCATTTCAAAGAGAAAGGTCGTTCTCTTTGGTTTGTGGAGGTGTGTGCTTTATTGTAGGACCTTTTGGGGGAGAGGAACAATAGAGTGTTTCAAGAGGGACCCTAGCAAGGTTTGGTCTTTGGTGAGGTTTCACGTTTCTCAATAGGCTTCATTGCTTCAGTTTTACAGACTTATTGTAATTATTGCCTAGGCAATTTCTTACCTAGTTGGAAACCCTTCCTTTTAGTAGGGACTTTTTGTGGGCTTGGTTTTTGTATGCCTTTGTATTCTTTCATTTTTTTTTCAAAATAAAAGCAGTTTCTATTTTTAAAAAATCATGCCCAAATATGCTATACTTTCTAAGGAAATCTTTTGCATGAAGTTTTCATCTAATTAATTAAGAGCAACATTCTTTGTCTTCATAAAGGTAACAAGCTTCCTAATTTGACAATTATTGTCGCTTGTCTAGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGAGAGTCTTAAAGACGTGGAATCTGGAGGAAATGTTGAAAATGTTTAG ATGGTCGCCATAGTCCATCTACCCCTATCCTACGATGCCACCACTGCCGCCACCTACCCTAAGGATATGGGAGGCAGAGGAGTCATTGGTGACAAATGGTCCATGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGAGAGTCTTAAAGACGTGGAATCTGGAGGAAATGTTGAAAATGTTTAG ATGGTCGCCATAGTCCATCTACCCCTATCCTACGATGCCACCACTGCCGCCACCTACCCTAAGGATATGGGAGGCAGAGGAGTCATTGGTGACAAATGGTCCATGAGGGTTCTCTGGGTTTGTGCTCTAGGAAGTGTAATCGGTATGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGACTGAGAGTCTTAAAGACGTGGAATCTGGAGGAAATGTTGAAAATGTTTAG MVAIVHLPLSYDATTAATYPKDMGGRGVIGDKWSMRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLKDVESGGNVENV* Homology
BLAST of Chy6G122320 vs. ExPASy TrEMBL
Match: A0A0A0L386 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104860 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.9e-25 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of Chy6G122320 vs. ExPASy TrEMBL
Match: A0A1S3BUK9 (uncharacterized protein LOC103493339 OS=Cucumis melo OX=3656 GN=LOC103493339 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-22 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of Chy6G122320 vs. ExPASy TrEMBL
Match: A0A6J1FS83 (uncharacterized protein LOC111447969 OS=Cucurbita moschata OX=3662 GN=LOC111447969 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.6e-21 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Chy6G122320 vs. ExPASy TrEMBL
Match: A0A6J1EMV3 (uncharacterized protein LOC111435944 OS=Cucurbita moschata OX=3662 GN=LOC111435944 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.6e-21 Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Chy6G122320 vs. ExPASy TrEMBL
Match: A0A6J1CPB9 (uncharacterized protein LOC111012874 OS=Momordica charantia OX=3673 GN=LOC111012874 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.3e-21 Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of Chy6G122320 vs. NCBI nr
Match: XP_004133703.1 (uncharacterized protein LOC101203530 isoform X2 [Cucumis sativus] >KAE8650176.1 hypothetical protein Csa_010323 [Cucumis sativus]) HSP 1 Score: 119 bits (299), Expect = 1.61e-33 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of Chy6G122320 vs. NCBI nr
Match: XP_008452266.1 (PREDICTED: uncharacterized protein LOC103493339 [Cucumis melo] >XP_008452267.1 PREDICTED: uncharacterized protein LOC103493339 [Cucumis melo]) HSP 1 Score: 115 bits (288), Expect = 7.68e-32 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of Chy6G122320 vs. NCBI nr
Match: XP_038903238.1 (uncharacterized protein LOC120089884 [Benincasa hispida]) HSP 1 Score: 111 bits (277), Expect = 3.66e-30 Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Chy6G122320 vs. NCBI nr
Match: XP_022929341.1 (uncharacterized protein LOC111435944 [Cucurbita moschata] >XP_023551825.1 uncharacterized protein LOC111809676 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110 bits (274), Expect = 1.05e-29 Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Chy6G122320 vs. NCBI nr
Match: XP_022943152.1 (uncharacterized protein LOC111447969 [Cucurbita moschata] >XP_022943153.1 uncharacterized protein LOC111447969 [Cucurbita moschata]) HSP 1 Score: 110 bits (274), Expect = 1.05e-29 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Chy6G122320 vs. TAIR 10
Match: AT3G15395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 8.2e-17 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of Chy6G122320 vs. TAIR 10
Match: AT3G15395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 8.2e-17 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of Chy6G122320 vs. TAIR 10
Match: AT3G15395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 8.2e-17 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of Chy6G122320 vs. TAIR 10
Match: AT3G15395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 8.2e-17 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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