Chy6G121810 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G121810
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	KH domain-containing protein
Location	chrH06: 19172704 .. 19182704 (-)
RNA-Seq Expression	Chy6G121810
Synteny	Chy6G121810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCTCATGCATCCCCTCACAGGACTCCTTCCATCCCTTTAGATCGGGAGAGGTAATTCTTCTTTCTTTCTCTTCTCAATTCTTGATCATGATTTGCTTTCTATTTTTAATTATTATTTGGAACTTCTTGATTCAGATTCCTTGTTTGATTAATCATTCGTAATGGGTGCTTCTTTTTTCTTTTTTTCTTTTTTTGGTTTGATGATCCTTATCATTGCATTTGAATACTAATCAGATGGCCTTGTATTTGGTTGTGCTGTTGGACATGTAGTTGTGTTACTTTTGGACCTTAAGAGTTTATATGTGATGATGATTTTGTGTTTTGTGTGACAATGGCAGGTGTCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTTCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGGTGGGGTTATAAGATCTCTAGCATTGCATTTTGTTGTTGCAATACTTATAATTGTTTCTTATGCTGGCAGTGATAGAACCACAGTTTCCATCTTATACTACAGTTAGGGACTTTCATTCTTTGAAGTGTATTAAGGGTATGGGTAGAAACAGTTCTCATAATCATTTGAACAAATTTAATTACAACTAAGCACCCAAGTTTCCATATAGTTTTATGTAAAACTTTTTTTTAAAAAAATAATAATACTTGGTGTTGTAGCTATATTGTTATATTTTTCACATTAAAATGCTACTAACTGTCAGTTGTATCAAGTGGTATCAAAGCATCATTCGATGCATTAATTTATTGGAAGAAAGGCTTGAAGCACAAGTGGGTTTGCTAGCTTTTGAAAATTTAAGATGTTGAAAGAAATTGGTGATGGAAATTTGTTGACTCAAGAACAGCGAAGAAGACGCAATGTCCAATCTGGTGGAACATATGTTGAATGAATATTTGTCATTTGCTAGTTGCAATTGGAGAAGGAGGAAATTCATTTGAGAAGGAGGAAGCCACCAACGAGCAATCAGAATATTATTTCTTACTTCCTCAGCTATAAGGAGGAAATTCATTTGCTCCCAAAGGATGCAACAGAGTTAGCTGAGGAAGTAAGATTAGAGGATCAGAAATGGAATTTCATGAAGGGGCTAAGAATGACAATGGTACATTTTGTTGCTAGATGTAGCAAGGGGAATATTGTCTGAGGAGAAATCAGTAGTCTTTGTGAAAGAAAAATCACTAGAGTGAGATTTGAAGGTAGTGGCTGATATCTTTATAAACAGGGTGATGGCATCATAAATGCACATTAGCAAAAATGAAACCATACGTATTCAACTTCAATGGGGATTTGTAAACGTTGTGAGCTATATCATCCCCCCTTCTCAGATCCTTCATTTTGAAGCTTTGCCTTTGTACTTTGTTCTCTTCTGTGGAAGAATTGCAGATGTATAGATGCTTACTTGAGAAATCAAGGGCAGTGAAGTAGGTCTGGTAGCAACGGAGGAAAATGGAAGTTTGGTGGTAAAAGGAAGGTGTAGGAAGATTTCATATTTGAGCTATGCAGAAGAAGTGTTTAGATGTGGGTTAACACAAGGCAATGCTCGTTTAGGATTGCTTGGATGGAGTGCAAACCGTGGTGGCATTTAGTTACCAGGAATATGGAAGGAAATAGTTGATAGACCCCCCATAATATATCAATATAGTAGAAGAAAGAAAATCAGTTAGTAGTTAGAATAGTTAGACTGAAACTGTTTAAACTGTTATTGTTACACCATAACAGTTAAACAGACAGTTAGAAGTTAGTTAAAACCTAACTTCTAACCATCAATTCCATGGTAATAAAAGGGAGAAACTATGGAAGAGATGGGAGGGATTTTTGTAATAAACAAGAGAGGAAGACTTCTGACATCTTTGAGAGATAAGATTCAGGAGGGAAGAATTCATTTGTAAGGGAGCAGCTATTATCAATAAAGTTCAAATCTAAATACAACGGTTTCCATCATATTGGTATCAGAGCGGTAACCATCCGGAGCAAGTAAGTGAACCATGATGAAGCAAGTCGAAGACAGATTCGAAACTTTGGAGCAAGAAACACCAACATTAAAGTAGGATTGCAGCGGCTACCAGAACTCGAAACCAAGATGACGAAGTACATGGAGAAGATGGATGTGCAGAACGAATTAAATACACAATAGACGCAAAAGATTTTGAAATATATCGAGAGTATGATGAGGGACCCGTCATCAACAACCCCAGAAACTAGTAAGATGAAAGCGAAGATGATCGAAGGCCAAGGAGAACCAAGTTCCAAAGAAGAAGAAGGTGAGAAGAACAATGATCGAAATAAATTCAAGAAGGTGGAAATGCCCGTATTCAATGGCAAAGACCCCGATTCTTGGTTGTTCCGTGCCGATAGATACTTTCAAATTCATAAGCTGACCGATTCCGAGAAGATGACTGTGGCAACAATCAGCTTTGATGGACCGGCACTTAATTGGTATCGGGCACAAGAAGAACGAGATAAATTCACAGGATGGGCGAACCTGAAAGAAAGACTATTGGTACGATTTCGATCAGCTCGAGAAGGATCTATATGTGGGCAGTTTTTAAGAATTAAGCAAGAGACCTCTGTTGAAGAATATAGAAATTTGTTCGACAAACTCATGGCACCCTTATCTGATCTTCCGAATCAAGTAGTGGAACAAACCTTCTTGAACGGATTGCTGCCATGGATTAAGACAAAAGTGGAAATTGGCCGCCCGACTAATCTAGCCCAAATGATGCAACTCGCACAGCTGGTGGAAAACCGAGAGATCATTCGTGCAGAAGCCAATCTTCAAGGAAATAATTCACACTACATCAAGCTTCAAATCTAAGACCGCAGGAGGAAGCAATAATTGTGACAACAAACACAATACTACTTGGCCTATGAGAACTATCACACTGAAGGAAACAACGACCGGGGAAACAAGGAAGGAGGGGCCATCCAAGAGGCTCAGTGATGCGGAATTCCAAGCTAGGAAGGAGAAGGGTCTATGCTTCCGGTGTAATGAAAAATTCTTTCATGGTCACAAGTGCAAAACAAAGGAGCAAAGAGAACTCAGGATGTTTGTGGTCCAAATCGATAACGAAGAATGGGAGATGTTGATAAAGAATTTAACATGGCAAAGGTGACGGAAATGGAGCAAGCTGTTATAGAGTTGTCCATCAACTCAGTCGTTGGCTTATCTAACCCCGGCACTATGAAAGTTAAAGGAAGCATCAAGGACAAGGAGGTAGTAATTCTAATCGATTGTGGAGCGACACATAACTTCATCTCTACCCGAGTAGTTGAAAAACTACAGTTAGCAACCAAAGACACTTCTCATTACGGAGTCATTCTAGGGTTAGGTATGGCCGTCAAGGGGAAGGGGGTATGTGAAGCAGTCGAGGTGAAGCTGAGAGGTTGGCAACTAATAGCTAACTTCTTACCATTGGAGTTAGGAGGAGTGGAAGTTGTGTTGGGAATGCAATGGCTGTATTCCCTCGGCATCACTAAAGTAGACTGGAGAAACTTAACCATGACGTTCGTACATCAAGGCAAAAAAATAACCATCAGAGGAGATCCCAGCTTGACAAAAACAAGAATTGGTCTGAAGAAGATGATGAAAACATTGGATGATTCCGATCAAGGATTCTTGATCGAATGCCGCGCAATGGAAGGGAGATTAATGAGTGAAGAAGGAGATGTCATAAGAAAGACAACGGTTGATGAAGAAGCAGTAGCTGCAGTTCTGAAAGATTACGAAGATATATTCTTGTGTCCTGAGAAATTACCCCAAAGAAGGAACATCACATACACCAAAAAGAGGGCACCGAACCAGTCAATGTACGACCATACCGCTACGCCTATCAGCAGAAGGCCGAGATAGAGAAGTTGGTAGATGAAATGTTGATGTCAGGAATAATATGGCCTAGCAGCAGCCCATACTCCAGCCCAGTACTCTTGGTAAGGAAGAAGGATGGCCGTTGGCGTTTTTGTATAGACTATAGAGCACTAAATAACGTCACCATACCTGACAAATTTTCAATTCCCGTCATTGAAGAGTTATTTGACGAATTGAATGGAGCATCGTGGTTCTCAAAAATTGACCTAAAGGCGGGATACCACCAGATTCGCATGTACGAAGACGACATCAAGAAGACTGCCTTTCGGCCTAACCAATGCACCATCAACTTTCCAGTCTCTGATGAACTCCATATTCAAACCATACCTTAGGAGATTTGTGTTGGTGTTCTTCGACGATATCCTAATTTACAGCAAGAATTTCCAATCCCATCTTCAACACATCAGCTTAACTCTACAAGTACTTCGGAGGAATGAATTATATGCCAACTGAAAGAAGTGCAGTTTTGCTCAGGAAAGGGTTGATTATTTGGGACATATCATTTCAAGCCAAGGCGTGGAGGTGGACCCAGAGAAAATACGAGCCATAAAAGAATGGCCAATCCCCTCTAACATACGGCAAGTCAGAGGCTTTTTGGGCTTGACAGGCTATTACAGAAAGTTTGTACAAGGGTATGGAACCATAGCCGCACCCTTAACCCAACTACTTAAGAAAGGAGGATTCAATTGGGGAGAGGAAGCACAAGAAGCCTTTCTTAAACTACAGAAGGCAATGATGACACTCCCTGTGCTAGCCTTGCTAGACTTTAGAAACCGATGCATCTGGGTTTGGAATAGGGGATGTGCTTACTCAATACAAAAGACCTATAGCTTATTTCAGCCACACACTGGCAACTAAAGACCGGGCTAAACCGGTATACGAAAGAGAGCTAATGGCAGTGGTATTGGCAGTACAACGATGGAGACCGTACTTATTAGGCAAGAAGTTTTTGGTGAAAACGGATCAACAATCATTAAAGTTCCTATTGGAACAAAGAATGATTCAACCAGAATATCAAAAATGGATAGCTAAACTCCTAGGCTATTCGTTCGAGGTGGTGTATAAGCCTGGCTTGGAGAATAAGGCAGTCGATGCCCTGTCTCGAATGCCAACTACCGCTCAATTGAACTCATTGACGACCCGATAGACCTACAGGTCATCAAAAGAGAAGTGGAAGAAGATGACAACTTAAAAAAGATCATGGCAACCATAAAAGAAGAAGAAGAGACAAGGGAACAGAAATACTCCATTAAACAAGGGATGCTAAGATACGAAGACCGATTAGTAATTTCAGAAAACTCTACGCTGATTCCTGTAATACTCCACACCTATCATGACTCAGTGTTCGGAGGACACTCGGGGTTTCTACGAACATATAAAAGAATAGCAGGAGAGTTATACTAGAAGAGAATGAAGCAAAGAATTAGGAAATACAGTGAGGAGTGCTCTGTATGCCAGAGAAATAAAGCACTGACTCTATCACCCGCCGGATTATTAGTTCCATTAGAGATTCCCAGCAAAATATGGAATGACATCTCAATGGATTTCATCGAAGGACTACCGAAACTCAAAGGGTTCGAAGTAATTTTGGTAGTGGTGGACCGGCTAAGCAAATATGGACACTTCTTATTAGTCAAGCATCCTTATACCGCCAAAACCATAGCGGAGTTGTTTGTCAAAGAAGTGGTTCGGCTTCATGGTTACCCCAGTTCCATAGTGACTGATCGAGACAAAATATTCCTAAGCAATTTCTGGAGGGAACTCTTCAAATTAGCGGGCACCAGATTGAATAGAAGCACCGCATACCATCCCCAATCTAATGGCTAAACTGAAGTGGTCAATAGAGGACTGGAGACGTATTTACGTTGTTTTTGCGGAGAAAAACCAAGGGAATGGGCGGAATGGGTCCATTGGGCAGAATATTGGTACAATACGACCTACCAAAGATCCTTGGGGGTAACACCTTTCCAAGCAGTTTACGGTCGTTCACCCCCTCTTATCTACTACGGGGATTTTGTCACTACAAACTCCACCTTAGACGAACAACTAAAAGAGAGGGATGTTGTTCTTGGGGTATTAAAGGAAAATCTGAGGATAGCTCAAGAAAAAATGAAGAAAGATGCTGACTTGAAACGAAGAGAAATTGAGTACGAGGTAGGAGAAAAGGTGTTCCTCAAATTACGACCATATCGACAGACATCCTTACGAAAGAAGAGGAACCAGAAACTTTCTCCAAAAAATTTCGGCCCATACGAGATATTGAAGAGAATTGGACACGTAGCCTATGAGCTAAAATTACCAGACACAGCAACTATTCATCCTGTCTTCCATGTTTCCCAGCTGAAGAAATCCACGGGAGAACACCAACAAATACAAACTGATATGAATTATCTTACAGATAATCAAGAATGGGGATCAGAGCTTGAGGAAATACACGACTATCAAAGGAAACGGGATAACAATTGGGAAGCACTAGTACAATGGAAGGGACTGCCCAGTCACGAAGCTACATGGGAAGATTATGATGATTTGCATCAACGATACCCGCAGTTTCACCTTGAGGACAAGGTGAATTTGGAGAAGAGGTGTAATGATAGACCCCCCATGATATATCAATATAGTAGAAGAAAGAAAATCAGTTAGTAGTTAGAATAGTTAGACTGAAACTGTTTAAACTGTTATTGTTACACCATAACAGTTAAACAGACAGTTAGAAGTTAGTTAAAACCTAACTTCTAACCATCAATTCCACGGTAATAAAAGGGAGAAACTATGGAAGAGATGGGAGGGATTTGTGTAATAAACAAGAGAGGAAGACTTCTGACATCTTTGAGAGATAAGATTCAGGAGGGAAAAATTCATTTGTAAGAGAGCAGCTATTATCAATAAAGTTCAAATCTTAAATACAACGGTTTCCATCAATAGTTTCAGCCTAGAACCATTCCCTTGATCCACACCTTGAGGACAAGGTGTATTTTTGGTGGAATACGATAGGACCTGTATCAAAGGTAGTGTGTAGTGTAGTCTTTGCCATTTGTAAAGTTCTAGGAGGAGTGCCGTTTTGTTCATTTGAGTCCACTAGTTGTAAATAGAGGCTGGGTGGTTGGAGAGATGAAATTTGATGGTTGTTTGGCTTGTGCTTGCCTCAAAAATGAACCACCCATGCTACCTTGAAATACTTTAGAATCGGAGATTAAACCTATTTTATTTTGTTTGCCTATTACATGCAATGGAGAGTTCTTGTTTTCTGGGACCTACTAAATGCGTATGCCTTATTCTATATTACCAAGTTCTAGTTGGGATCAGGTCAATCTAAGTTTAGGCTAAGCCTGTTATGTCCAAGGGTGTCATTTTCTCTATAGATGGAGGCAAAAATGTATCCTACTGTCAAGTCATAATTAATAAGACTAATCAAGAACACCATACTGTCTTGACTTATAAAAAATGATGTTAACCTGTGATGATGTCATGAATTCGAGACTTGACCTTGGAATTTTTTGGATTATTTTCCTCTGCCTCACATGAACAGGCATGTGGTGATAATTTTCTGGCATCTTGAGAAAAGTTCCCAGTGACTGGTAAATTTCATGAATAACAAAGCATTTAAAGTCGTCATCTTAAACATGAGTATTTGCTTAGTCAATTGCATGTGCACCCCCTTATTTATGACCTCTCATTGCAGAGATCAGACGTTTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCATGGCAGTCCTTACAGGTCACTAGGTCAGCTATCGAATGGAAGACCAATGGACATGGAAGGTTGGCCTCCAATGCAAATGGAGGTTAGCTGGATAATTTATTTGATAATGTACTAAAAATATTTTTCTTAATTAGTGATATTTTTGTAATGGACATCCTTGGAACTGCCTTACATTGACAATGGTACTCAGGCATCCTTGATCTCGATTTGAAGTCTCTCTTTAATCACTAATTTCTTCATATTAGGATATTTTTGTAAAATGGAAAATCTAACTTCTTTAAAATGAATGAAAGAACAACAGGGTGACCAATAGCTACCTTCAAGATATGAGTCTTTTACATTATTAAATCTTCGTCATGTTTATATGTTTGTCTTGGGGAATTTTGTAGGGTATTTCCAAAAATTCCCAGCCTTTACTACTAGGGAACTCCTTGGTTCTAGCCTCAACAACCTCAAAATAGGATAAGTTGGTTTTCATATTTGCACTTGTTTGGTTTGAAAATAAACTTAGAAGCAAATACACTTGCCGCTTGGCTAACGCATCTGCATCAGATCTGTTGGACACTTGGACACTTGGACACTCTGAAATTTTATAGACATGCATATACAGTATCACACACTTGTTAGCAAGCACAATTTATATGCCTTAAATATTAGTTGTACACAGTGAATAAGGACCAATCATTTCTCAAGGGACAATAGGTCACAAGTTTAAACATAAGAAATAGACACAAATGGTACCAAGATAAAAAATAATTAATTCATGCGTGTCAAATTTAAATTTCTTTATTGTACAAAAATTACAGATCCTTTTAAAAAATACATTTCAATCAATGTGTCCTTAACTTTTGAAAAATGACATGTCACTTCATCTGGATTGCATGTCCGTATCCATACTCATGCTTCTTAGTTACATTTTATTTTCTGCAGGGGAGTGGACATGTCCATGGTATGGGTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACACCAATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATGTAAGTTAAAATATTTTAATGATAGGTGGTGATTGTACTGACCTTTTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTTGTTGGACGACTTCTGGGACCTCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGATCTATCAAGGATGCTTTAGAGGTACCGAAAATTTCTCTTGGTGTGGTTAAACGTTTTACTTATTGCATCACTTAAGACTTAACTGATGAGGCAGTGTCCTGGTCAATATTTTTCTGATTGATGCTAGAAATATTTTTGTTCCCTTATGAGTTCTTACTTCTTCCAAATTGTGAAATACCCATAACCACTCAATTATACATCTTTAACTTATAGTTGTGCGTCATCTTATATGTTTTGAATATGGATTTGGGAGGCTTTGCATTTTATGTTCCAACTCCATCTTTATTCCAACTTCTATTATCTACTTTATCAGTTAAATTGCCATGCTGCAAACAAGTTCAACCTCATCCTATGAAAACGTGTATTTGATACATTTCATTCATACAATATGTGTTCTTGTGTAAACCTTTACCTCTTTGGCATTCCTTTCTTTTTTCTGGTATGCGTCATGAACGCTATCTGCTTCATGGTTTTGCATTTACTTGTTTTAAAGATCATCAAATTTCTACCTCTTTTTGGTTATATTAAAAACTCAATAATCTTTTGCATCATAAGGAAGGCCGTTAATAGTTTTTGTGACTTTCTTTTACTGCCTTAAGTTAGAGTGCCTTATACACATCTTTTTTGGGAAATTAACTTTTTTCAATCTCCTAATCTTAACTTAAACTTCAGTATTGCTAACAATGTACCTGGATGTTGTGCTTTAGGAAGAGAAACTAAAGGACAAACCTGGATATGAGCATCTTAATGAGCCCTTGCATCTGTTAGTTGAGGCAGAATTTCCAGAGGATACAATAAATGCACGCTTGGATCATGCAGTGGCAGTTTTAGAAAGTCTTTTGAAACCTGTGGTATGAACAAAACGGTTACAGAAAACATCTCTTCGATTTTTATAGAAAGCCAAGTTTTATTGAGTTTCTGTTATTCCAGGATGAATTGCTGGATCAATATAAGAAGCAACAACTAAGAGAACTTGCACTACTAAATGGCACCCTAAGGGAGGAAAGTCCAAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGGCTCAAACGAGCCAAGACAGGGAGGTAG

mRNA sequence

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCTCATGCATCCCCTCACAGGACTCCTTCCATCCCTTTAGATCGGGAGAGGTGTCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTTCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTTTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCATGGCAGTCCTTACAGGTCACTAGGTCAGCTATCGAATGGAAGACCAATGGACATGGAAGGTTGGCCTCCAATGCAAATGGAGGGGAGTGGACATGTCCATGGTATGGGTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACACCAATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATGTGGTGATTGTACTGACCTTTTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTTGTTGGACGACTTCTGGGACCTCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGATCTATCAAGGATGCTTTAGAGGAAGAGAAACTAAAGGACAAACCTGGATATGAGCATCTTAATGAGCCCTTGCATCTGTTAGTTGAGGCAGAATTTCCAGAGGATACAATAAATGCACGCTTGGATCATGCAGTGGCAGTTTTAGAAAGTCTTTTGAAACCTGTGGATGAATTGCTGGATCAATATAAGAAGCAACAACTAAGAGAACTTGCACTACTAAATGGCACCCTAAGGGAGGAAAGTCCAAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGGCTCAAACGAGCCAAGACAGGGAGGTAG

Coding sequence (CDS)

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCTCATGCATCCCCTCACAGGACTCCTTCCATCCCTTTAGATCGGGAGAGGTGTCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTTCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTTTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCATGGCAGTCCTTACAGGTCACTAGGTCAGCTATCGAATGGAAGACCAATGGACATGGAAGGTTGGCCTCCAATGCAAATGGAGGGGAGTGGACATGTCCATGGTATGGGTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACACCAATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATGTGGTGATTGTACTGACCTTTTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTTGTTGGACGACTTCTGGGACCTCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGATCTATCAAGGATGCTTTAGAGGAAGAGAAACTAAAGGACAAACCTGGATATGAGCATCTTAATGAGCCCTTGCATCTGTTAGTTGAGGCAGAATTTCCAGAGGATACAATAAATGCACGCTTGGATCATGCAGTGGCAGTTTTAGAAAGTCTTTTGAAACCTGTGGATGAATTGCTGGATCAATATAAGAAGCAACAACTAAGAGAACTTGCACTACTAAATGGCACCCTAAGGGAGGAAAGTCCAAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGGCTCAAACGAGCCAAGACAGGGAGGTAG

Protein sequence

MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR*

Homology

[Close]

BLAST of Chy6G121810 vs. ExPASy Swiss-Prot
Match: Q8GWR3 (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.5e-95
Identity = 188/315 (59.68%), Postives = 227/315 (72.06%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRER L ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +D+EGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFV 180
           +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+                     YNFV
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPS---------------------YNFV 190

Query: 181 GRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEF 240
           GR+LGPRGNSLKRVE  T CRV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE 
Sbjct: 191 GRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAEL 250

Query: 241 PEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPS------MSP 300
           PED IN+RL+HAV  LESLLKP+DE +D YK++QL+ELA LNGTLREESPS      +SP
Sbjct: 251 PEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSP 296

Query: 301 SMSPFNSTGLKRAKT 309
           SMSPFNS   KRAKT
Sbjct: 311 SMSPFNS---KRAKT 296

[Close]

BLAST of Chy6G121810 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71
Identity = 157/306 (51.31%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 68
           +Y ++ P  A +   RTPS  +D  + +++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 69  GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPLQAHS 128
           G+  NQ   D +R  H   SP  S   +SN     + GW  +  E  G  HGM      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 129 MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVGRLLG 188
           M W      P++  VKR++RLD+PVD YPN                     +NFVGRLLG
Sbjct: 126 MEWQGAPASPSSYPVKRILRLDLPVDTYPN---------------------FNFVGRLLG 185

Query: 189 PRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTI 248
           PRGNSLKRVEA T CRVYIRGKGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D +
Sbjct: 186 PRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIV 245

Query: 249 NARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLK 308
           + +L  A  ++E L+KPVDE  D  K+QQLRELALLN  LRE SP  S S+SPFNS  +K
Sbjct: 246 DIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMK 283

Query: 309 RAKTGR 311
           R KTGR
Sbjct: 306 RPKTGR 283

[Close]

BLAST of Chy6G121810 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.3e-71
Identity = 156/312 (50.00%), Postives = 196/312 (62.82%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPH------RTPSIPLDRERCLAELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+        PS  +++E+ L+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  DM GW       S     
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW------ASQFPSE 142

Query: 128 MGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQY 187
                + +  W    G  +  IVKR +R+D+PVDKYPN                     Y
Sbjct: 143 RSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPN---------------------Y 202

Query: 188 NFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVE 247
           NFVGRLLGPRGNSLKRVEA T+CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVE
Sbjct: 203 NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVE 262

Query: 248 AEFPEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMS 307
           AE P + ++ARL  A  +L+ LL PV+E  D YKKQQLRELALLNG+LREE   MS S+S
Sbjct: 263 AELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSIS 306

Query: 308 PFNSTGLKRAKT 309
           P+NS G+KRAKT
Sbjct: 323 PYNSLGMKRAKT 306

[Close]

BLAST of Chy6G121810 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.6e-68
Identity = 153/300 (51.00%), Postives = 191/300 (63.67%), Query Frame = 0


Query: 16  PSAHASPHRTPSIPLDRE-RCLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQT- 75
           P+ + SP +  S P D + + LAELL+E QKLGPF+QVLP CS+LL+QEI R+S +    
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNH 70

Query: 76  ---SVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPLQAHSMGWPRV 135
                D  RF   SP  S    SN        W  +  E  G   G       SM W   
Sbjct: 71  GFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGT------SMDWQGA 130

Query: 136 QGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVGRLLGPRGNSL 195
              P++ +VK+++RLDVPVD YPN                     +NFVGR+LGPRGNSL
Sbjct: 131 PPSPSSHVVKKILRLDVPVDSYPN---------------------FNFVGRILGPRGNSL 190

Query: 196 KRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDH 255
           KRVEA T CRV+IRGKGSIKD  +E+KL+ KPGYEHL++PLH+L+EAEFP   I+ARL H
Sbjct: 191 KRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRH 250

Query: 256 AVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 311
           A  V+E LLKPVDE  D YK+QQLRELA+LN TLRE+SP    S+SPF++ G+KRAKTG+
Sbjct: 251 AQEVIEELLKPVDESQDFYKRQQLRELAMLNSTLREDSPHPG-SVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Chy6G121810 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.4e-68
Identity = 152/302 (50.33%), Postives = 188/302 (62.25%), Query Frame = 0


Query: 15  PPSAHASPHRT------PSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+ +       S+ +++E+ L+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPLQAHSMG 134
            L  N T +     +H SP  S G   N R  DM GW              GP       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 135 WPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVGRLLGPR 194
           W    G  +  I KR +R+D+PVD YPN                     +NFVGRLLGPR
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPN---------------------FNFVGRLLGPR 218

Query: 195 GNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINA 254
           GNSLKRVEA T+CRV IRG+GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + ++A
Sbjct: 219 GNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDA 278

Query: 255 RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRA 309
           RL  A  +L+ LL P++E  D YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRA
Sbjct: 279 RLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRA 312

[Close]

BLAST of Chy6G121810 vs. ExPASy TrEMBL
Match: A0A5D3BT43 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00980 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.7e-161
Identity = 289/310 (93.23%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 180

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS
Sbjct: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 289

Query: 301 TGLKRAKTGR 311
           TGLKRAKTGR
Sbjct: 301 TGLKRAKTGR 289

[Close]

BLAST of Chy6G121810 vs. ExPASy TrEMBL
Match: A0A0A0L3B7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.7e-161
Identity = 289/310 (93.23%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 111 MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 170

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL
Sbjct: 171 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 230

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 231 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 290

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 291 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 350

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS
Sbjct: 351 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 399

Query: 301 TGLKRAKTGR 311
           TGLKRAKTGR
Sbjct: 411 TGLKRAKTGR 399

[Close]

BLAST of Chy6G121810 vs. ExPASy TrEMBL
Match: A0A1S3BST0 (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.7e-161
Identity = 289/310 (93.23%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 180

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS
Sbjct: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 289

Query: 301 TGLKRAKTGR 311
           TGLKRAKTGR
Sbjct: 301 TGLKRAKTGR 289

[Close]

BLAST of Chy6G121810 vs. ExPASy TrEMBL
Match: A0A6J1FX42 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3662 GN=LOC111447793 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.4e-157
Identity = 282/310 (90.97%), Postives = 286/310 (92.26%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVH +GPL
Sbjct: 62  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 121

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 122 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 181

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 182 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 241

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTIN+RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+
Sbjct: 242 EDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNT 290

Query: 301 TGLKRAKTGR 311
           TGLKRAKTGR
Sbjct: 302 TGLKRAKTGR 290

[Close]

BLAST of Chy6G121810 vs. ExPASy TrEMBL
Match: A0A6J1JCV7 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=3661 GN=LOC111485631 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156
Identity = 281/310 (90.65%), Postives = 286/310 (92.26%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVH +GPL
Sbjct: 62  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 121

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 122 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 181

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFP
Sbjct: 182 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFP 241

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTIN+RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+
Sbjct: 242 EDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNT 290

Query: 301 TGLKRAKTGR 311
           TGLKRAKTGR
Sbjct: 302 TGLKRAKTGR 290

[Close]

BLAST of Chy6G121810 vs. NCBI nr
Match: XP_004133720.1 (KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242.1 PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis melo] >KAE8650188.1 hypothetical protein Csa_010365 [Cucumis sativus])

HSP 1 Score: 578 bits (1489), Expect = 1.56e-207
Identity = 289/310 (93.23%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 180

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS
Sbjct: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 289

Query: 301 TGLKRAKTGR 310
           TGLKRAKTGR
Sbjct: 301 TGLKRAKTGR 289

[Close]

BLAST of Chy6G121810 vs. NCBI nr
Match: KAA0060582.1 (KH domain-containing protein [Cucumis melo var. makuwa] >TYK02290.1 KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 578 bits (1489), Expect = 8.60e-206
Identity = 289/310 (93.23%), Postives = 289/310 (93.23%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 180

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS
Sbjct: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 289

Query: 301 TGLKRAKTGR 310
           TGLKRAKTGR
Sbjct: 301 TGLKRAKTGR 289

[Close]

BLAST of Chy6G121810 vs. NCBI nr
Match: XP_038904738.1 (KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida])

HSP 1 Score: 570 bits (1469), Expect = 1.74e-204
Identity = 285/310 (91.94%), Postives = 288/310 (92.90%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEG+GHVHGMGPL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGTGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 180

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTIN+RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS
Sbjct: 241 EDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 289

Query: 301 TGLKRAKTGR 310
           TGLKRAKTGR
Sbjct: 301 TGLKRAKTGR 289

[Close]

BLAST of Chy6G121810 vs. NCBI nr
Match: XP_022942905.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_023552162.1 KH domain-containing protein At1g09660/At1g09670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564 bits (1454), Expect = 3.50e-202
Identity = 282/310 (90.97%), Postives = 286/310 (92.26%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVH +GPL
Sbjct: 62  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 121

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 122 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 181

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP
Sbjct: 182 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 241

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTIN+RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+
Sbjct: 242 EDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNT 290

Query: 301 TGLKRAKTGR 310
           TGLKRAKTGR
Sbjct: 302 TGLKRAKTGR 290

[Close]

BLAST of Chy6G121810 vs. NCBI nr
Match: XP_022988372.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima])

HSP 1 Score: 563 bits (1451), Expect = 1.00e-201
Identity = 281/310 (90.65%), Postives = 286/310 (92.26%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVH +GPL
Sbjct: 62  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPL 121

Query: 121 QAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVG 180
           QAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPN                     YNFVG
Sbjct: 122 QAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPN---------------------YNFVG 181

Query: 181 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFP 240
           RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFP
Sbjct: 182 RLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFP 241

Query: 241 EDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNS 300
           EDTIN+RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+
Sbjct: 242 EDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNT 290

Query: 301 TGLKRAKTGR 310
           TGLKRAKTGR
Sbjct: 302 TGLKRAKTGR 290

[Close]

BLAST of Chy6G121810 vs. TAIR 10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 350.1 bits (897), Expect = 1.8e-96
Identity = 188/315 (59.68%), Postives = 227/315 (72.06%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRER L ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +D+EGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFV 180
           +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+                     YNFV
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPS---------------------YNFV 190

Query: 181 GRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEF 240
           GR+LGPRGNSLKRVE  T CRV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE 
Sbjct: 191 GRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAEL 250

Query: 241 PEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPS------MSP 300
           PED IN+RL+HAV  LESLLKP+DE +D YK++QL+ELA LNGTLREESPS      +SP
Sbjct: 251 PEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSP 296

Query: 301 SMSPFNSTGLKRAKT 309
           SMSPFNS   KRAKT
Sbjct: 311 SMSPFNS---KRAKT 296

[Close]

BLAST of Chy6G121810 vs. TAIR 10
Match: AT1G09660.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-79
Identity = 153/263 (58.17%), Postives = 187/263 (71.10%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRER L ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +D+EGW  MQ E + H+    P 
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFV 180
           +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+                     YNFV
Sbjct: 131 RGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPS---------------------YNFV 190

Query: 181 GRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEF 240
           GR+LGPRGNSLKRVE  T CRV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE 
Sbjct: 191 GRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAEL 247

Query: 241 PEDTINARLDHAVAVLESLLKPV 263
           PED IN+RL+HAV  LESLLKP+
Sbjct: 251 PEDIINSRLEHAVHFLESLLKPM 247

[Close]

BLAST of Chy6G121810 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-72
Identity = 157/306 (51.31%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 68
           +Y ++ P  A +   RTPS  +D  + +++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 69  GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPLQAHS 128
           G+  NQ   D +R  H   SP  S   +SN     + GW  +  E  G  HGM      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 129 MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVGRLLG 188
           M W      P++  VKR++RLD+PVD YPN                     +NFVGRLLG
Sbjct: 126 MEWQGAPASPSSYPVKRILRLDLPVDTYPN---------------------FNFVGRLLG 185

Query: 189 PRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTI 248
           PRGNSLKRVEA T CRVYIRGKGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D +
Sbjct: 186 PRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIV 245

Query: 249 NARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLK 308
           + +L  A  ++E L+KPVDE  D  K+QQLRELALLN  LRE SP  S S+SPFNS  +K
Sbjct: 246 DIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMK 283

Query: 309 RAKTGR 311
           R KTGR
Sbjct: 306 RPKTGR 283

[Close]

BLAST of Chy6G121810 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 269.6 bits (688), Expect = 3.1e-72
Identity = 156/312 (50.00%), Postives = 196/312 (62.82%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPH------RTPSIPLDRERCLAELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+        PS  +++E+ L+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  DM GW       S     
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW------ASQFPSE 142

Query: 128 MGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQY 187
                + +  W    G  +  IVKR +R+D+PVDKYPN                     Y
Sbjct: 143 RSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPN---------------------Y 202

Query: 188 NFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVE 247
           NFVGRLLGPRGNSLKRVEA T+CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVE
Sbjct: 203 NFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVE 262

Query: 248 AEFPEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMS 307
           AE P + ++ARL  A  +L+ LL PV+E  D YKKQQLRELALLNG+LREE   MS S+S
Sbjct: 263 AELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSIS 306

Query: 308 PFNSTGLKRAKT 309
           P+NS G+KRAKT
Sbjct: 323 PYNSLGMKRAKT 306

[Close]

BLAST of Chy6G121810 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 260.0 bits (663), Expect = 2.4e-69
Identity = 152/302 (50.33%), Postives = 188/302 (62.25%), Query Frame = 0


Query: 15  PPSAHASPHRT------PSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+ +       S+ +++E+ L+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPLQAHSMG 134
            L  N T +     +H SP  S G   N R  DM GW              GP       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 135 WPRVQGIPTTPIVKRVVRLDVPVDKYPNVVIVLTFCLSDVSSFLLKSRQYNFVGRLLGPR 194
           W    G  +  I KR +R+D+PVD YPN                     +NFVGRLLGPR
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPN---------------------FNFVGRLLGPR 218

Query: 195 GNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINA 254
           GNSLKRVEA T+CRV IRG+GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + ++A
Sbjct: 219 GNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDA 278

Query: 255 RLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRA 309
           RL  A  +L+ LL P++E  D YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRA
Sbjct: 279 RLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRA 312

The following BLAST results are available for this feature:

BLAST of Chy6G121810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWR3	2.5e-95	59.68	KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702...	[more]
Q8GYR4	1.9e-71	51.31	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q0WLR1	4.3e-71	50.00	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q75GR5	2.6e-68	51.00	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	3.4e-68	50.33	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Chy6G121810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BT43	4.7e-161	93.23	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L3B7	4.7e-161	93.23	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=...	[more]
A0A1S3BST0	4.7e-161	93.23	KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1FX42	5.4e-157	90.97	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1JCV7	1.2e-156	90.65	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=366...	[more]

BLAST of Chy6G121810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133720.1	1.56e-207	93.23	KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242...	[more]
KAA0060582.1	8.60e-206	93.23	KH domain-containing protein [Cucumis melo var. makuwa] >TYK02290.1 KH domain-co...	[more]
XP_038904738.1	1.74e-204	91.94	KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida]	[more]
XP_022942905.1	3.50e-202	90.97	KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_0...	[more]
XP_022988372.1	1.00e-201	90.65	KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima]	[more]

BLAST of Chy6G121810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09660.1	1.8e-96	59.68	RNA-binding KH domain-containing protein	[more]
AT1G09660.2	2.0e-79	58.17	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	1.4e-72	51.31	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	3.1e-72	50.00	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	2.4e-69	50.33	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 36..68 e-value: 1.3E-8 score: 34.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 29..292 e-value: 6.9E-65 score: 220.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 175..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..310
None	No IPR available	PANTHER	PTHR11208:SF101	OS01G0886300 PROTEIN	coord: 172..310
None	No IPR available	PANTHER	PTHR11208:SF101	OS01G0886300 PROTEIN	coord: 8..158
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 144..285 e-value: 6.30653E-47 score: 152.013
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 172..310
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 8..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G121810.1	Chy6G121810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding