Chy6G119960 (gene) Cucumber (hystrix) v1

Overview
NameChy6G119960
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionULP_PROTEASE domain-containing protein
LocationchrH06: 15961866 .. 15964233 (-)
RNA-Seq ExpressionChy6G119960
SyntenyChy6G119960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATTACATGCGAGATGCTCACTATGTACCTCTTTATTTTATAATAGCCAAGTTCTCATTGAGTACAAGTTTTTTTACTCCTTGTGTCCAAGTGCAAGCAAAATATTAGGTTTACCTAGATGATCCAGAGTTGAACACAGGAAATTGATTCAAGACATTAGTTCTAGGAATTACTTGTCATCTAGGCGGTATAAAAGAATTAATTAAATAAAGTATAAAAGAATCAGAACTAGGATTAAAACTACTTATGCACGAGTGTTCCTTTATTGACTTTTCCATATTTTTTAGGTATTTGCATTCACAAGATGTTTCAAATTACATCTTCGTTGACCCATCCCTTATATCTGTTGGTCACAACACCAAAGAAGTTAGAGCTCGCAATCTATGTAGTAGATTAATGGCTTCAAAACAAAACCAACTCATTCGGGCTCCTTTTAATCCCTGGTAAGTAATAAAATATACTAATCAATTCATTAAATTGTATTGCTTCTTCTTCCGTTGATATTGAAACACATAGCTCATACTTTATTGTGCTCTTCGTTTAGGTTTGTTCATATTATGTTTCTTTAGGAAATAAAATAATTAAGCTATAGATGATATGTTACTTTGAATTGAATCTTAGGATTTAGATTATGTTAAGGCAATATGAGGGGGGGGGGGGTCAACTTTTATTGTTGTAGTTTACTTTCAAACATCACAGAGAGATAGAAAGAAAGGAGCCAAAATGGGTTGGATTGGAGAGACAATCGAGTCTTTCAAATCCATCAAAATCAGAAAGGCTCTATGTTAGGCATTAGTTTTGGTACATAAACTCACTAAATTTTTAATGTTATATATCAAATGAGTGTCCTCATTATGCAAGGAAGTATTCTTTTGTTTGTTTTTTTTGTTGATTCAATTTGAATTTTCTCTATTCCATTACAAATGTGAGTTATATCTACAACTTGGTTTTATGAATTGTCTGAGGTTACATCACACATTTAGACTCTAACTTTGGTCTGTTTGGTTTCAATGTCTCAAAATTTAAGTTGTGATGCTGTATTACTTCTACTTTTACACCGTTAACTAAATGGTGATGAAGTGGGATGGATGTTGAACCAATATGTGCTAATTTGACATGAGTTGATAGATTAATAGTAGAAAAAAAAACGGACAATTATGAACGGGATTTTGACTCTTTTATGTTCTATTTCATTTTAGGTGATATGTTACTTTGAATTTTTGTAGTTTATTTTTTATTTAGCATAGAGGAACTTGTTTTGGGTTATTTTAAAGCAATTTGTTTCTTTGAATTGAATCCTAAGATTTTAGATCATATTATGTTGCTTCTTCTTCCATTGATATTGAAACACATAGCTCATACTTTAATGTGCTCTCCGTTTAGCTTTGATCATATTATGTTTCTTTAGGACATAAAATAATTAAGCTATAGGTGATCATGTTACTTTGAATTGAATTTTAGGATTTTAGATTATGTTAAGGAAATAGGGGGGGGGGGGGGTCAACTTTTATTGTTGTAGTCTACTTTCAAAACATCATAGAGAGATAGGAAGAAAGGAGCCAAAATAGGTTGGTGATAGAAAAAAACGGACAATTATGAACGGGATTTTGACTCTTTTATATTCTATTTCATTTTAGGTGATATGTTACTTTGAATTGTTGTAGTTTACTTTTGATTTAGCATAGAGAAACTTGTTTTGGATTATGTTAAGGCAATCTACTTATATTCTTTCTATGTAGTGGTCATTGGGCACTTCTAGCTATTAACGCATTCGATGAGACAATTTATTATATTGACTCACTGCAAACAACATCAAGAGTAGATATTAGAAACGTAACTGACACGTAAGTAAGTTTTTTTAATATATGATGTTTATCGTCTTAAAGTTCACTTCATGGCTAAAGTGTAGTTGTTTCTTGCAAATAGGGCTATTACTATATTTCGCTCTAAGAAAAATATTCAAACAAATAAAAAATAGTCAATATGGAAAATAGTGAAGGTAAAGTGTAAACATATTTATTCGTTAATTAAAAGTATACGGTATATGAGCTATTTACACTATTAAATATATATTTTGGTAATTTATGTATTTACAGTGACCTTTGCAAGTTGGAGTAGTTGAATGTGGGTACTGTGTGATGAGATACATGAGAGAGATAACACTAATGGGAGCATAGTAGTCACAGATTCGGTATGTTGTGTTTAAATGATTATTTGAATTATTTTCTACAATTCAAGTAATCAAAGTATTAACTTTAATATTTTGGATTTCATATCAGATTGATACAAGAAGCCCATATAGTCAATTCGAGTTGGATGAAGTGCGCATGAAGCTTGTTGATTTTTTGGGTGGCCACATTTGA

mRNA sequence

ATGATCATTACATGCGAGATGCTCACTATGTATTTGCATTCACAAGATGTTTCAAATTACATCTTCGTTGACCCATCCCTTATATCTGTTGGTCACAACACCAAAGAAGTTAGAGCTCGCAATCTATGTAGTAGATTAATGGCTTCAAAACAAAACCAACTCATTCGGGCTCCTTTTAATCCCTGGGCTATTACTATATTTCGCTCTAAGAAAAATATTCAAACAAATAAAAAATAGTCAATATGGAAAATAGTGAAGATTGATACAAGAAGCCCATATAGTCAATTCGAGTTGGATGAAGTGCGCATGAAGCTTGTTGATTTTTTGGGTGGCCACATTTGA

Coding sequence (CDS)

ATGATCATTACATGCGAGATGCTCACTATGTATTTGCATTCACAAGATGTTTCAAATTACATCTTCGTTGACCCATCCCTTATATCTGTTGGTCACAACACCAAAGAAGTTAGAGCTCGCAATCTATGTAGTAGATTAATGGCTTCAAAACAAAACCAACTCATTCGGGCTCCTTTTAATCCCTGGGCTATTACTATATTTCGCTCTAAGAAAAATATTCAAACAAATAAAAAATAGTCAATATGGAAAATAGTGAAGATTGATACAAGAAGCCCATATAGTCAATTCGAGTTGGATGAAGTGCGCATGAAGCTTGTTGATTTTTTGGGTGGCCACATTTGA

Protein sequence

MIITCEMLTMYLHSQDVSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNPWAITIFRSKKNIQTNKK*SIWKIVKIDTRSPYSQFELDEVRMKLVDFLGGHI*
Homology
[Close]
BLAST of Chy6G119960 vs. ExPASy TrEMBL
Match: A0A5D3BND5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00550 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34
Identity = 84/136 (61.76%), Postives = 93/136 (68.38%), Query Frame = 0 

Query: 11  YLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNPWAITIFRS 70
           YLHSQD +SNYIFVDPSLISVGHNT+EVRARNLCSRLM SK NQL+ APFNP AITIFRS
Sbjct: 15  YLHSQDELSNYIFVDPSLISVGHNTQEVRARNLCSRLMTSKPNQLVLAPFNPRAITIFRS 74

Query: 71  KKNIQTNKK*SIWKIVK--------------------------------IDTRSPYSQFE 114
           +KNIQT++K  IWK VK                                IDTR+ YSQ E
Sbjct: 75  QKNIQTSRKQPIWKTVKCPLQVGVVEYGYYVMRYMRDIITNGSILVTDFIDTRTSYSQLE 134

[Close]
BLAST of Chy6G119960 vs. ExPASy TrEMBL
Match: A0A5A7UMU3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00630 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 83/136 (61.03%), Postives = 94/136 (69.12%), Query Frame = 0 

Query: 11  YLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNPWAITIFRS 70
           YLHSQD +SNYIFVDPSLISVGHNT+EVRARNLCSRLMASK NQL+ APFNP AITIFRS
Sbjct: 64  YLHSQDELSNYIFVDPSLISVGHNTQEVRARNLCSRLMASKPNQLVLAPFNPRAITIFRS 123

Query: 71  KKNIQTNKK*SIWKIVK--------------------------------IDTRSPYSQFE 114
           +KNIQT++K  IWK +K                                IDTR+ YSQ +
Sbjct: 124 QKNIQTSRKQPIWKTMKCPLQVGVVEYGYYVMRYMRDIITNGSIVVTDFIDTRTSYSQLK 183

[Close]
BLAST of Chy6G119960 vs. ExPASy TrEMBL
Match: A0A5D3BVS7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.0e-33
Identity = 84/144 (58.33%), Postives = 96/144 (66.67%), Query Frame = 0 

Query: 3   ITCEMLTMYLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNP 62
           +T    T+YLHSQD +SNYIFV PSLISVGHNT+EVRARNLCSRLMASK NQL+ APFNP
Sbjct: 840 LTFVAYTVYLHSQDKLSNYIFVGPSLISVGHNTQEVRARNLCSRLMASKSNQLVLAPFNP 899

Query: 63  WAITIFRSKKNIQTNKK*SIWKIVK--------------------------------IDT 114
            AITIF S+KNIQT++K  IWK VK                                IDT
Sbjct: 900 GAITIFWSQKNIQTSRKQPIWKTVKCPLQVGVVECGYYVMRYMRNIITNRSIVVTDLIDT 959

[Close]
BLAST of Chy6G119960 vs. ExPASy TrEMBL
Match: A0A5A7TUX7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.0e-28
Identity = 85/179 (47.49%), Postives = 97/179 (54.19%), Query Frame = 0 

Query: 3    ITCEMLTMYLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNP 62
            +T    T+YLHSQD +SNYIFV PSLISVGHNT+EVRARNLCSRLMASK NQL+ APFNP
Sbjct: 840  LTFVAYTVYLHSQDKLSNYIFVGPSLISVGHNTQEVRARNLCSRLMASKSNQLVLAPFNP 899

Query: 63   ---W--------------------------------AITIFRSKKNIQTNKK*SIWKIVK 114
               W                                AITIF S+KNIQT++K  IWK VK
Sbjct: 900  GGHWALLAIKAYDEAVYYLDSLRTTSRVDIRYVTDTAITIFWSQKNIQTSRKQPIWKTVK 959

[Close]
BLAST of Chy6G119960 vs. ExPASy TrEMBL
Match: A0A5A7UGF9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00440 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.0e-28
Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 0 

Query: 9   TMYLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNPWAITIF 68
           +MYLHSQD +SNYIFVDPSLISVGHNT+EVRARNLCSRLMASK NQL+ APFNPWAITIF
Sbjct: 610 SMYLHSQDELSNYIFVDPSLISVGHNTQEVRARNLCSRLMASKPNQLVLAPFNPWAITIF 669

Query: 69  RSKKNIQTNKK*SIWKIVK 87
           RS+KNIQT++K  IWK VK
Sbjct: 670 RSQKNIQTSRKQPIWKTVK 688

[Close]
BLAST of Chy6G119960 vs. NCBI nr
Match: TYJ99668.1 (uncharacterized protein E5676_scaffold562G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (382), Expect = 1.96e-44
Identity = 84/136 (61.76%), Postives = 93/136 (68.38%), Query Frame = 0 

Query: 11  YLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNPWAITIFRS 70
           YLHSQD +SNYIFVDPSLISVGHNT+EVRARNLCSRLM SK NQL+ APFNP AITIFRS
Sbjct: 15  YLHSQDELSNYIFVDPSLISVGHNTQEVRARNLCSRLMTSKPNQLVLAPFNPRAITIFRS 74

Query: 71  KKNIQTNKK*SIWKIVK--------------------------------IDTRSPYSQFE 113
           +KNIQT++K  IWK VK                                IDTR+ YSQ E
Sbjct: 75  QKNIQTSRKQPIWKTVKCPLQVGVVEYGYYVMRYMRDIITNGSILVTDFIDTRTSYSQLE 134

[Close]
BLAST of Chy6G119960 vs. NCBI nr
Match: KAA0054779.1 (uncharacterized protein E6C27_scaffold437G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 150 bits (379), Expect = 2.45e-43
Identity = 83/136 (61.03%), Postives = 94/136 (69.12%), Query Frame = 0 

Query: 11  YLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNPWAITIFRS 70
           YLHSQD +SNYIFVDPSLISVGHNT+EVRARNLCSRLMASK NQL+ APFNP AITIFRS
Sbjct: 64  YLHSQDELSNYIFVDPSLISVGHNTQEVRARNLCSRLMASKPNQLVLAPFNPRAITIFRS 123

Query: 71  KKNIQTNKK*SIWKIVK--------------------------------IDTRSPYSQFE 113
           +KNIQT++K  IWK +K                                IDTR+ YSQ +
Sbjct: 124 QKNIQTSRKQPIWKTMKCPLQVGVVEYGYYVMRYMRDIITNGSIVVTDFIDTRTSYSQLK 183

[Close]
BLAST of Chy6G119960 vs. NCBI nr
Match: TYK03264.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (375), Expect = 7.66e-39
Identity = 83/138 (60.14%), Postives = 94/138 (68.12%), Query Frame = 0 

Query: 9   TMYLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNPWAITIF 68
           T+YLHSQD +SNYIFV PSLISVGHNT+EVRARNLCSRLMASK NQL+ APFNP AITIF
Sbjct: 846 TVYLHSQDKLSNYIFVGPSLISVGHNTQEVRARNLCSRLMASKSNQLVLAPFNPGAITIF 905

Query: 69  RSKKNIQTNKK*SIWKIVK--------------------------------IDTRSPYSQ 113
            S+KNIQT++K  IWK VK                                IDT++ YSQ
Sbjct: 906 WSQKNIQTSRKQPIWKTVKCPLQVGVVECGYYVMRYMRNIITNRSIVVTDLIDTKTSYSQ 965

[Close]
BLAST of Chy6G119960 vs. NCBI nr
Match: KAA0055044.1 (uncharacterized protein E6C27_scaffold43052G002120 [Cucumis melo var. makuwa] >TYK24433.1 uncharacterized protein E5676_scaffold205G002330 [Cucumis melo var. makuwa])

HSP 1 Score: 131 bits (329), Expect = 6.12e-36
Identity = 83/171 (48.54%), Postives = 93/171 (54.39%), Query Frame = 0 

Query: 11  YLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNP---WA--- 70
           YLHSQD +SN IF+DPSLISVGHNT+EVRARNLCSRLMASK NQL+ APFNP   WA   
Sbjct: 15  YLHSQDELSNCIFIDPSLISVGHNTQEVRARNLCSRLMASKSNQLVLAPFNPGGHWALLA 74

Query: 71  -----------------------------ITIFRSKKNIQTNKK*SIWKIVK-------- 113
                                        I IFRS+KNIQT++K  IWK VK        
Sbjct: 75  INAYDETVYYLNSLRTTSRVDIRYVTDTAIAIFRSQKNIQTSRKQPIWKTVKCSLQVGVV 134

[Close]
BLAST of Chy6G119960 vs. NCBI nr
Match: KAA0036658.1 (uncharacterized protein E6C27_scaffold4533G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (326), Expect = 3.21e-34
Identity = 83/171 (48.54%), Postives = 93/171 (54.39%), Query Frame = 0 

Query: 11  YLHSQD-VSNYIFVDPSLISVGHNTKEVRARNLCSRLMASKQNQLIRAPFNP---WA--- 70
           Y HSQD +SNYIFVDPSLISV HNT+EVRARNLCSRLMASK NQL+ APFNP   WA   
Sbjct: 130 YFHSQDELSNYIFVDPSLISVRHNTQEVRARNLCSRLMASKPNQLVLAPFNPGGHWALLA 189

Query: 71  -----------------------------ITIFRSKKNIQTNKK*SIWKIVK-------- 113
                                        ITIFRS+KNIQT++K  IWK VK        
Sbjct: 190 INAYDETVYYLDSLRTTSRLDIRYVTDTAITIFRSQKNIQTSRKQPIWKTVKCPLQVEVV 249

The following BLAST results are available for this feature:
BLAST of Chy6G119960 vs.
Match NameE-valueIdentityDescription
BLAST of Chy6G119960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BND54.7e-3461.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UMU31.0e-3361.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BVS74.0e-3358.33Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE... [more]
A0A5A7TUX75.0e-2847.49Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE... [more]
A0A5A7UGF95.0e-2883.54Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00440 PE... [more]
BLAST of Chy6G119960 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ99668.11.96e-4461.76uncharacterized protein E5676_scaffold562G00550 [Cucumis melo var. makuwa][more]
KAA0054779.12.45e-4361.03uncharacterized protein E6C27_scaffold437G00630 [Cucumis melo var. makuwa][more]
TYK03264.17.66e-3960.14transposase [Cucumis melo var. makuwa][more]
KAA0055044.16.12e-3648.54uncharacterized protein E6C27_scaffold43052G002120 [Cucumis melo var. makuwa] >T... [more]
KAA0036658.13.21e-3448.54uncharacterized protein E6C27_scaffold4533G00050 [Cucumis melo var. makuwa][more]
BLAST of Chy6G119960 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G119960.1Chy6G119960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity
molecular_function GO:0003676 nucleic acid binding