Homology
BLAST of Chy6G119860 vs. ExPASy Swiss-Prot
Match:
Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)
HSP 1 Score: 429.9 bits (1104), Expect = 3.4e-119
Identity = 209/402 (51.99%), Postives = 288/402 (71.64%), Query Frame = 0
Query: 27 RAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAFAILLFYQI 86
R+ +A + L+ C NF L+QIH KII+ L+NDQLL R+LI + S+ G +A L+F Q+
Sbjct: 19 RSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL 78
Query: 87 RNPCTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTNFLSIDLG 146
++P TFTWNL+IR+ ++N +AL+L+ M+ DKFTFPFVIKAC SI LG
Sbjct: 79 QSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLG 138
Query: 147 KVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKMCVRNVVSWTTVISGLISC 206
VHG IK GF D F QN L+D YFKCG KVF+KM R++VSWTT++ GL+S
Sbjct: 139 TQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSN 198
Query: 207 GHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 266
L A +F+++P +NVVSWTAMI Y++N++P+EA +LF+RMQ +++ PNE+T+V+L+
Sbjct: 199 SQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLL 258
Query: 267 KACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP 326
+A T++G LS+GR ++DYA KN + +LGTALIDMYSKCGS++DA +VF+ M KSL
Sbjct: 259 QASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLA 318
Query: 327 TWNSMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFIGVLCACVHIKNVKEGCAYFKR 386
TWNSMITSLGVHG G+EAL+LF EM E +V+PDAITF+GVL AC + NVK+G YF R
Sbjct: 319 TWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTR 378
Query: 387 MTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
M Q YGI+PI EH CM +L ++ +++A +++ +PD
Sbjct: 379 MIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
BLAST of Chy6G119860 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 298.9 bits (764), Expect = 9.2e-80
Identity = 157/458 (34.28%), Postives = 241/458 (52.62%), Query Frame = 0
Query: 35 LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTW 94
L C N ++Q+HA+IIR L D + KLI S + A+ +F Q++ P
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 95 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 154
N +IRA+ N QA ++ M G+ AD FT+PF++KAC+ + + K++H + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 155 YGFSGDAFVQNNLIDFYFKCG--HTRCALKVFEKMCVRNVVSWTTVISGLISCGHLQEAR 214
G S D +V N LID Y +CG R A+K+FEKM R+ VSW +++ GL+ G L++AR
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 215 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP---------------- 274
R+FDE+P ++++SW M++GY R ++ +A ELF++M N
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 275 ------------------------------------------------NEYTMVSLIKAC 334
+ ++S++ AC
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 335 TEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWN 394
TE G+LSLG I+ ++ + Y+ AL+DMY+KCG++K A +VF +P+K L +WN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 395 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFKRMTQH 427
+M+ LGVHG G+EA+ LFS M R ++PD +TFI VLC+C H + EG YF M +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
BLAST of Chy6G119860 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 294.3 bits (752), Expect = 2.3e-78
Identity = 149/419 (35.56%), Postives = 244/419 (58.23%), Query Frame = 0
Query: 13 FPSKNIPLTP-RGNIRAKKALFLLQ-NCKNFKHLRQIHAKIIRSGLSNDQL-LTRKLIHL 72
F +P P G++ L L+ C + L+QIHA +I++GL +D + +R L
Sbjct: 8 FSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFC 67
Query: 73 YSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GIAADKF 132
++ + +A L+F +I + F WN IIR + + E A+ ++ +M+C + +
Sbjct: 68 CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRL 127
Query: 133 TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKM 192
T+P V KA G+ +HG +IK G D+F++N ++ Y CG A ++F M
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 193 CVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFK 252
+VV+W ++I G CG + +A+ +FDE+P +N VSW +MI+G++RN + ++AL++F+
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 253 RMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCG 312
MQ +++ P+ +TMVSL+ AC +G GR I++Y ++N E+ + TALIDMY KCG
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 313 SIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 372
I++ + VFE P+K L WNSMI L +G + A++LFSE+ER ++PD+++FIGVL
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 373 ACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
AC H V +F+ M + Y I P +HY M + + L+EA K + +E D
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
BLAST of Chy6G119860 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 5.0e-78
Identity = 144/402 (35.82%), Postives = 237/402 (58.96%), Query Frame = 0
Query: 32 LFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLY---STHGR----IAFAILLFY 91
L LLQ+C +F L+ IH ++R+ L +D + +L+ L ST + + +A +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 92 QIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDL 151
QI+NP F +NL+IR + +A Y M+ I D TFPF+IKA + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 152 GKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKMCVRNVVSWTTVISGLIS 211
G+ H ++++GF D +V+N+L+ Y CG A ++F +M R+VVSWT++++G
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 212 CGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 271
CG ++ AR +FDE+P +N+ +W+ MINGY +N E+A++LF+ M+ E + NE MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 272 IKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 331
I +C +G L G +Y +K+ + + + LGTAL+DM+ +CG I+ AI VFE +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 332 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFKR 391
+W+S+I L VHG +A++ FS+M + P +TF VL AC H V++G ++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 392 MTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
M + +GI P EHY C+ ++ R+ L EA + ++P+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN 417
BLAST of Chy6G119860 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 285.8 bits (730), Expect = 8.0e-76
Identity = 151/403 (37.47%), Postives = 239/403 (59.31%), Query Frame = 0
Query: 29 KKALFLLQNCKNFKHLRQIHAKIIRSGL---SNDQLLTRKLIHLYSTHGRIAFAILLFYQ 88
+K L+ ++ + QIHA I+R L +L KL Y++HG+I ++ LF+Q
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 89 IRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG 148
+P F + I +INGL +QA +LY ++ I ++FTF ++K+C S G
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSG 149
Query: 149 KVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKMCVRNVVSWTTVISGLISC 208
K++H ++K+G D +V L+D Y K G A KVF++M R++VS T +I+
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209
Query: 209 GHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE-NIFPNEYTMVSL 268
G+++ AR +FD + +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269
Query: 269 IKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 328
+ AC+++G L GR I+ + + I + V + T LIDMYSKCGS+++A+ VF PRK +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329
Query: 329 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFIGVLCACVHIKNVKEGCAYFK 388
WN+MI +HG Q+AL LF+EM+ + ++P ITFIG L AC H V EG F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389
Query: 389 RMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
M Q YGI P EHY C+ L R+ L A+++ K ++++ D
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
BLAST of Chy6G119860 vs. ExPASy TrEMBL
Match:
A0A1S3BNB7 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)
HSP 1 Score: 832.0 bits (2148), Expect = 1.1e-237
Identity = 401/425 (94.35%), Postives = 412/425 (96.94%), Query Frame = 0
Query: 2 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 61
MVPCLSYTHDVFPSKN LTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL
Sbjct: 1 MVPCLSYTHDVFPSKNFSLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60
Query: 62 LTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 121
LTRKLIHLYSTHGRI +AI LFYQI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSTHGRIVYAIFLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 122 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCAL 181
IAADKFTFPFVIKACTNFLSIDLGKVVHGS IKYGFSGDAFVQNNLIDFYFKCGH CAL
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSSIKYGFSGDAFVQNNLIDFYFKCGHKHCAL 180
Query: 182 KVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 241
KVFEKM V NVVSWTTVISGLISCG L EARRIFDE+PSKNVVSWTAMINGYIRNQQPEE
Sbjct: 181 KVFEKMRVCNVVSWTTVISGLISCGDLLEARRIFDEMPSKNVVSWTAMINGYIRNQQPEE 240
Query: 242 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALID 301
ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGI+DY IKNC EIGVYLGTALID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGIHDYTIKNCFEIGVYLGTALID 300
Query: 302 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 361
MYSKCGSIKDAIEVFETMPR+SLPTWNSMITSLGVHGLGQ+ALN+FSEMERVNV+PDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQQALNIFSEMERVNVEPDAIT 360
Query: 362 FIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 421
F+GVLCACVH+KNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI
Sbjct: 361 FVGVLCACVHMKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 420
Query: 422 SIEPD 427
S+EPD
Sbjct: 421 SVEPD 425
BLAST of Chy6G119860 vs. ExPASy TrEMBL
Match:
A0A6J1F6V3 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441407 PE=4 SV=1)
HSP 1 Score: 755.0 bits (1948), Expect = 1.7e-214
Identity = 366/426 (85.92%), Postives = 393/426 (92.25%), Query Frame = 0
Query: 1 MMVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQ 60
+MVPCLS THDVF + N+ L+ RGNI AKKALFLLQNCKNFK LRQIHAKIIRS +SNDQ
Sbjct: 16 IMVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQ 75
Query: 61 LLTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ 120
LLTRKLIHLYS+HGRIA+AI LF+QI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ
Sbjct: 76 LLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ 135
Query: 121 GIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCA 180
GIAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFYFKCGH RCA
Sbjct: 136 GIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCA 195
Query: 181 LKVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 240
LKVFEKM V NVVSWTT+ISGL+SCG +Q ARRIFDE+P KNVVSWTAMINGYIRNQ PE
Sbjct: 196 LKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPE 255
Query: 241 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALI 300
EALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGI+DYAI N EIGVYLGTALI
Sbjct: 256 EALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALI 315
Query: 301 DMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 360
DMYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI
Sbjct: 316 DMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 375
Query: 361 TFIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKA 420
TF+GVLCACVH+KNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYA+ DEAF+STKA
Sbjct: 376 TFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQ----DEAFESTKA 435
Query: 421 ISIEPD 427
+S+EPD
Sbjct: 436 MSMEPD 437
BLAST of Chy6G119860 vs. ExPASy TrEMBL
Match:
A0A6J1F116 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441407 PE=4 SV=1)
HSP 1 Score: 754.6 bits (1947), Expect = 2.3e-214
Identity = 366/425 (86.12%), Postives = 392/425 (92.24%), Query Frame = 0
Query: 2 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 61
MVPCLS THDVF + N+ L+ RGNI AKKALFLLQNCKNFK LRQIHAKIIRS +SNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 60
Query: 62 LTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 121
LTRKLIHLYS+HGRIA+AI LF+QI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 122 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCAL 181
IAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFYFKCGH RCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 182 KVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 241
KVFEKM V NVVSWTT+ISGL+SCG +Q ARRIFDE+P KNVVSWTAMINGYIRNQ PEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 242 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALID 301
ALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGI+DYAI N EIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 302 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 361
MYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 362 FIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 421
F+GVLCACVH+KNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYA+ DEAF+STKA+
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQ----DEAFESTKAM 420
Query: 422 SIEPD 427
S+EPD
Sbjct: 421 SMEPD 421
BLAST of Chy6G119860 vs. ExPASy TrEMBL
Match:
A0A6J1J2R2 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482147 PE=4 SV=1)
HSP 1 Score: 741.5 bits (1913), Expect = 2.0e-210
Identity = 359/415 (86.51%), Postives = 383/415 (92.29%), Query Frame = 0
Query: 1 MMVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQ 60
+MVPCLS THDVF + N+ L+ RGNI AKKALFLLQNCKNFKHLRQIHAKIIR G+SNDQ
Sbjct: 16 IMVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRCGISNDQ 75
Query: 61 LLTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ 120
LLTRKLIHLYS+HGRIA+AI LF+QI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ
Sbjct: 76 LLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ 135
Query: 121 GIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCA 180
GIAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFYFKCGH RCA
Sbjct: 136 GIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCA 195
Query: 181 LKVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 240
LKVFEKM V NVVSWTT+ISGL+SCG +Q ARRIFDE+P KNVVSWTAMINGYIRNQ PE
Sbjct: 196 LKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPE 255
Query: 241 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALI 300
EALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGI+DYAI N EIGVYLGTALI
Sbjct: 256 EALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALI 315
Query: 301 DMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 360
DMYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI
Sbjct: 316 DMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 375
Query: 361 TFIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 416
TF+GVLCACVH+KNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYA+ DEAF
Sbjct: 376 TFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQ----DEAF 426
BLAST of Chy6G119860 vs. ExPASy TrEMBL
Match:
A0A6J1IZS9 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482147 PE=4 SV=1)
HSP 1 Score: 741.1 bits (1912), Expect = 2.6e-210
Identity = 359/414 (86.71%), Postives = 382/414 (92.27%), Query Frame = 0
Query: 2 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 61
MVPCLS THDVF + N+ L+ RGNI AKKALFLLQNCKNFKHLRQIHAKIIR G+SNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRCGISNDQL 60
Query: 62 LTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 121
LTRKLIHLYS+HGRIA+AI LF+QI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 122 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCAL 181
IAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFYFKCGH RCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 182 KVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 241
KVFEKM V NVVSWTT+ISGL+SCG +Q ARRIFDE+P KNVVSWTAMINGYIRNQ PEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 242 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALID 301
ALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGI+DYAI N EIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 302 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 361
MYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 362 FIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 416
F+GVLCACVH+KNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYA+ DEAF
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQ----DEAF 410
BLAST of Chy6G119860 vs. NCBI nr
Match:
XP_011651588.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Cucumis sativus])
HSP 1 Score: 848 bits (2192), Expect = 1.94e-310
Identity = 416/425 (97.88%), Postives = 420/425 (98.82%), Query Frame = 0
Query: 2 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 61
MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL
Sbjct: 1 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60
Query: 62 LTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 121
LTRKLIHLYSTHGRIA+AILLFYQI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 122 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCAL 181
IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGD FVQNNLIDFYFKCGHTR AL
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180
Query: 182 KVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 241
KVFEKM VRNVVSWTTVISGLISCG LQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240
Query: 242 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALID 301
ALELFKRMQAENIFPNEYTMVSLIKACTEMGIL+LGRGI+DYAIKNCIEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALID 300
Query: 302 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 361
MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 362 FIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 421
FIGVLCACVHIKNVKEGCAYF RMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI
Sbjct: 361 FIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 420
Query: 422 SIEPD 426
SIEPD
Sbjct: 421 SIEPD 425
BLAST of Chy6G119860 vs. NCBI nr
Match:
XP_008450021.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 [Cucumis melo] >XP_008450022.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 [Cucumis melo])
HSP 1 Score: 827 bits (2136), Expect = 6.67e-302
Identity = 401/425 (94.35%), Postives = 412/425 (96.94%), Query Frame = 0
Query: 2 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 61
MVPCLSYTHDVFPSKN LTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL
Sbjct: 1 MVPCLSYTHDVFPSKNFSLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60
Query: 62 LTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 121
LTRKLIHLYSTHGRI +AI LFYQI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSTHGRIVYAIFLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 122 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCAL 181
IAADKFTFPFVIKACTNFLSIDLGKVVHGS IKYGFSGDAFVQNNLIDFYFKCGH CAL
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSSIKYGFSGDAFVQNNLIDFYFKCGHKHCAL 180
Query: 182 KVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 241
KVFEKM V NVVSWTTVISGLISCG L EARRIFDE+PSKNVVSWTAMINGYIRNQQPEE
Sbjct: 181 KVFEKMRVCNVVSWTTVISGLISCGDLLEARRIFDEMPSKNVVSWTAMINGYIRNQQPEE 240
Query: 242 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALID 301
ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGI+DY IKNC EIGVYLGTALID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGIHDYTIKNCFEIGVYLGTALID 300
Query: 302 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 361
MYSKCGSIKDAIEVFETMPR+SLPTWNSMITSLGVHGLGQ+ALN+FSEMERVNV+PDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQQALNIFSEMERVNVEPDAIT 360
Query: 362 FIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 421
F+GVLCACVH+KNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI
Sbjct: 361 FVGVLCACVHMKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 420
Query: 422 SIEPD 426
S+EPD
Sbjct: 421 SVEPD 425
BLAST of Chy6G119860 vs. NCBI nr
Match:
XP_038880756.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Benincasa hispida])
HSP 1 Score: 765 bits (1976), Expect = 1.24e-277
Identity = 372/418 (89.00%), Postives = 390/418 (93.30%), Query Frame = 0
Query: 2 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 61
MVPCLSYTHDVFPSKN LT RGNIRAKKALFLLQNCKNFK LRQIHAKIIRSGLSNDQL
Sbjct: 1 MVPCLSYTHDVFPSKNFSLTSRGNIRAKKALFLLQNCKNFKQLRQIHAKIIRSGLSNDQL 60
Query: 62 LTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 121
LTRKLIHLYS+HGRIA+AI LF QI+NPCTFTWNLIIRANTINGLSE+ALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFNQIQNPCTFTWNLIIRANTINGLSEEALMLYKNMVCQG 120
Query: 122 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCAL 181
IAADKFTFPFVIKACT F +IDLGKVVH S IKYGFS D FVQNNLIDFYFKCGH C L
Sbjct: 121 IAADKFTFPFVIKACTIFFAIDLGKVVHASSIKYGFSRDTFVQNNLIDFYFKCGHKHCGL 180
Query: 182 KVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 241
KVFEKM V NVVSWTT+ISGL+SCG +QEARRIFDE+PSKNVVSWTAMINGYIRNQQPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQQPEE 240
Query: 242 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALID 301
ALELFKRMQAENI PNEYTMVSLIKACTE+GILS+GRGI+DYAIKN EIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEIGILSVGRGIHDYAIKNSFEIGVYLGTALID 300
Query: 302 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 361
MYSKCGSIKDAIEVFETMPR+SLPTWNSMITSLGVHGLGQEALNLFSEMER NVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQEALNLFSEMERENVKPDAIT 360
Query: 362 FIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTK 419
F+G+LCACVH+KNVK GCAYFKRMTQHYGIAPIPEHY+CM ELYARSN+LDEA K
Sbjct: 361 FVGILCACVHMKNVKAGCAYFKRMTQHYGIAPIPEHYKCMAELYARSNSLDEALNQQK 418
BLAST of Chy6G119860 vs. NCBI nr
Match:
XP_023527079.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 754 bits (1948), Expect = 5.20e-273
Identity = 368/425 (86.59%), Postives = 393/425 (92.47%), Query Frame = 0
Query: 2 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 61
MVPCLS THDVF + N+ L+ RGNI AKKALFLLQNCKNFKHLRQIHAKIIRS +SNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISNDQL 60
Query: 62 LTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 121
LTRKLIHLYS+HGRIA+AI LF+QI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 122 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCAL 181
IAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFYFKCGH RCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 182 KVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 241
KVFEKM V NVVSWTT+ISGL+SCG +Q ARRIFDE+P KNVVSWTAMINGYIRNQ PEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 242 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALID 301
ALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGI+DYAI N EIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 302 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 361
MYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 362 FIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 421
F+GVLCACVH+KNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYAR DEAF+STKA+
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAM 420
Query: 422 SIEPD 426
S+EPD
Sbjct: 421 SMEPD 421
BLAST of Chy6G119860 vs. NCBI nr
Match:
XP_023527078.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 755 bits (1949), Expect = 6.66e-273
Identity = 368/426 (86.38%), Postives = 394/426 (92.49%), Query Frame = 0
Query: 1 MMVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQ 60
+MVPCLS THDVF + N+ L+ RGNI AKKALFLLQNCKNFKHLRQIHAKIIRS +SNDQ
Sbjct: 16 IMVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISNDQ 75
Query: 61 LLTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ 120
LLTRKLIHLYS+HGRIA+AI LF+QI+NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ
Sbjct: 76 LLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ 135
Query: 121 GIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCA 180
GIAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFYFKCGH RCA
Sbjct: 136 GIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCA 195
Query: 181 LKVFEKMCVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 240
LKVFEKM V NVVSWTT+ISGL+SCG +Q ARRIFDE+P KNVVSWTAMINGYIRNQ PE
Sbjct: 196 LKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPE 255
Query: 241 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALI 300
EALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGI+DYAI N EIGVYLGTALI
Sbjct: 256 EALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALI 315
Query: 301 DMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 360
DMYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI
Sbjct: 316 DMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 375
Query: 361 TFIGVLCACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKA 420
TF+GVLCACVH+KNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYAR DEAF+STKA
Sbjct: 376 TFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKA 435
Query: 421 ISIEPD 426
+S+EPD
Sbjct: 436 MSMEPD 437
BLAST of Chy6G119860 vs. TAIR 10
Match:
AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 429.9 bits (1104), Expect = 2.4e-120
Identity = 209/402 (51.99%), Postives = 288/402 (71.64%), Query Frame = 0
Query: 27 RAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAFAILLFYQI 86
R+ +A + L+ C NF L+QIH KII+ L+NDQLL R+LI + S+ G +A L+F Q+
Sbjct: 19 RSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL 78
Query: 87 RNPCTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTNFLSIDLG 146
++P TFTWNL+IR+ ++N +AL+L+ M+ DKFTFPFVIKAC SI LG
Sbjct: 79 QSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLG 138
Query: 147 KVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKMCVRNVVSWTTVISGLISC 206
VHG IK GF D F QN L+D YFKCG KVF+KM R++VSWTT++ GL+S
Sbjct: 139 TQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSN 198
Query: 207 GHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 266
L A +F+++P +NVVSWTAMI Y++N++P+EA +LF+RMQ +++ PNE+T+V+L+
Sbjct: 199 SQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLL 258
Query: 267 KACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP 326
+A T++G LS+GR ++DYA KN + +LGTALIDMYSKCGS++DA +VF+ M KSL
Sbjct: 259 QASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLA 318
Query: 327 TWNSMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFIGVLCACVHIKNVKEGCAYFKR 386
TWNSMITSLGVHG G+EAL+LF EM E +V+PDAITF+GVL AC + NVK+G YF R
Sbjct: 319 TWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTR 378
Query: 387 MTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
M Q YGI+PI EH CM +L ++ +++A +++ +PD
Sbjct: 379 MIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
BLAST of Chy6G119860 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 298.9 bits (764), Expect = 6.5e-81
Identity = 157/458 (34.28%), Postives = 241/458 (52.62%), Query Frame = 0
Query: 35 LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAFAILLFYQIRNPCTFTW 94
L C N ++Q+HA+IIR L D + KLI S + A+ +F Q++ P
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 95 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 154
N +IRA+ N QA ++ M G+ AD FT+PF++KAC+ + + K++H + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 155 YGFSGDAFVQNNLIDFYFKCG--HTRCALKVFEKMCVRNVVSWTTVISGLISCGHLQEAR 214
G S D +V N LID Y +CG R A+K+FEKM R+ VSW +++ GL+ G L++AR
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 215 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP---------------- 274
R+FDE+P ++++SW M++GY R ++ +A ELF++M N
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 275 ------------------------------------------------NEYTMVSLIKAC 334
+ ++S++ AC
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 335 TEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWN 394
TE G+LSLG I+ ++ + Y+ AL+DMY+KCG++K A +VF +P+K L +WN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 395 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFKRMTQH 427
+M+ LGVHG G+EA+ LFS M R ++PD +TFI VLC+C H + EG YF M +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
BLAST of Chy6G119860 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 294.3 bits (752), Expect = 1.6e-79
Identity = 149/419 (35.56%), Postives = 244/419 (58.23%), Query Frame = 0
Query: 13 FPSKNIPLTP-RGNIRAKKALFLLQ-NCKNFKHLRQIHAKIIRSGLSNDQL-LTRKLIHL 72
F +P P G++ L L+ C + L+QIHA +I++GL +D + +R L
Sbjct: 8 FSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFC 67
Query: 73 YSTHGRIAFAILLFYQIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GIAADKF 132
++ + +A L+F +I + F WN IIR + + E A+ ++ +M+C + +
Sbjct: 68 CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRL 127
Query: 133 TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKM 192
T+P V KA G+ +HG +IK G D+F++N ++ Y CG A ++F M
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 193 CVRNVVSWTTVISGLISCGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFK 252
+VV+W ++I G CG + +A+ +FDE+P +N VSW +MI+G++RN + ++AL++F+
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 253 RMQAENIFPNEYTMVSLIKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCG 312
MQ +++ P+ +TMVSL+ AC +G GR I++Y ++N E+ + TALIDMY KCG
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 313 SIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLC 372
I++ + VFE P+K L WNSMI L +G + A++LFSE+ER ++PD+++FIGVL
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 373 ACVHIKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
AC H V +F+ M + Y I P +HY M + + L+EA K + +E D
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
BLAST of Chy6G119860 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 293.1 bits (749), Expect = 3.6e-79
Identity = 144/402 (35.82%), Postives = 237/402 (58.96%), Query Frame = 0
Query: 32 LFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLY---STHGR----IAFAILLFY 91
L LLQ+C +F L+ IH ++R+ L +D + +L+ L ST + + +A +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 92 QIRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDL 151
QI+NP F +NL+IR + +A Y M+ I D TFPF+IKA + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 152 GKVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKMCVRNVVSWTTVISGLIS 211
G+ H ++++GF D +V+N+L+ Y CG A ++F +M R+VVSWT++++G
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 212 CGHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 271
CG ++ AR +FDE+P +N+ +W+ MINGY +N E+A++LF+ M+ E + NE MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 272 IKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 331
I +C +G L G +Y +K+ + + + LGTAL+DM+ +CG I+ AI VFE +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 332 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFKR 391
+W+S+I L VHG +A++ FS+M + P +TF VL AC H V++G ++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 392 MTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
M + +GI P EHY C+ ++ R+ L EA + ++P+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN 417
BLAST of Chy6G119860 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 285.8 bits (730), Expect = 5.7e-77
Identity = 151/403 (37.47%), Postives = 239/403 (59.31%), Query Frame = 0
Query: 29 KKALFLLQNCKNFKHLRQIHAKIIRSGL---SNDQLLTRKLIHLYSTHGRIAFAILLFYQ 88
+K L+ ++ + QIHA I+R L +L KL Y++HG+I ++ LF+Q
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 89 IRNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG 148
+P F + I +INGL +QA +LY ++ I ++FTF ++K+C S G
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSG 149
Query: 149 KVVHGSLIKYGFSGDAFVQNNLIDFYFKCGHTRCALKVFEKMCVRNVVSWTTVISGLISC 208
K++H ++K+G D +V L+D Y K G A KVF++M R++VS T +I+
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209
Query: 209 GHLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE-NIFPNEYTMVSL 268
G+++ AR +FD + +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269
Query: 269 IKACTEMGILSLGRGINDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 328
+ AC+++G L GR I+ + + I + V + T LIDMYSKCGS+++A+ VF PRK +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329
Query: 329 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFIGVLCACVHIKNVKEGCAYFK 388
WN+MI +HG Q+AL LF+EM+ + ++P ITFIG L AC H V EG F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389
Query: 389 RMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAISIEPD 427
M Q YGI P EHY C+ L R+ L A+++ K ++++ D
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q38959 | 3.4e-119 | 51.99 | Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... | [more] |
Q9LS72 | 9.2e-80 | 34.28 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9SJG6 | 2.3e-78 | 35.56 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
Q9FG16 | 5.0e-78 | 35.82 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q9SZT8 | 8.0e-76 | 37.47 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BNB7 | 1.1e-237 | 94.35 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 ... | [more] |
A0A6J1F6V3 | 1.7e-214 | 85.92 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
A0A6J1F116 | 2.3e-214 | 86.12 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
A0A6J1J2R2 | 2.0e-210 | 86.51 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 ... | [more] |
A0A6J1IZS9 | 2.6e-210 | 86.71 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X2 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_011651588.1 | 1.94e-310 | 97.88 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Cucumis sa... | [more] |
XP_008450021.1 | 6.67e-302 | 94.35 | PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic ... | [more] |
XP_038880756.1 | 1.24e-277 | 89.00 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Benincasa ... | [more] |
XP_023527079.1 | 5.20e-273 | 86.59 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
XP_023527078.1 | 6.66e-273 | 86.38 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
AT3G26630.1 | 2.4e-120 | 51.99 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 6.5e-81 | 34.28 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G42920.1 | 1.6e-79 | 35.56 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G06540.1 | 3.6e-79 | 35.82 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G37380.1 | 5.7e-77 | 37.47 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |