Chy6G119790 (gene) Cucumber (hystrix) v1

Overview
NameChy6G119790
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein of unknown function (DUF3754)
LocationchrH06: 15633348 .. 15633701 (-)
RNA-Seq ExpressionChy6G119790
SyntenyChy6G119790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAAGACGTTACTGGTTGATGTTTTACTTATTTTTTGGTTATGTAATTAGGAGCTTGACATGCGGTGTGAGCAGCTGATTCAAAGACAGTTTGATCAGAGCTGTAACTTTGACGTGGACGAAGCAGTTCACAAATTAGAGAAGTTGGGGATCGTTGTCTGGGTGAGAACTTAACGAGCACAAGATAATTTCTACTCATGTTGTTTAATGTCTTCTTATGCCTTCTTTAACTTGGAAAAGAACGGAACACAGGATGCGGATGTAGATTTGGGGAGTGCCAACAAGATCATAGGCATCACCACAGAGGAGATAGTATCCAAAGCTAAAGAAGGCGATGCTACCACCACTTGA

mRNA sequence

ATGAATAAGACGTTACTGGAGCTTGACATGCGGTGTGAGCAGCTGATTCAAAGACAGTTTGATCAGAGCTGTAACTTTGACGTGGACGAAGCAGTTCACAAATTAGAGAAGTTGGGGATCGTTGTCTGGAACGGAACACAGGATGCGGATGTAGATTTGGGGAGTGCCAACAAGATCATAGGCATCACCACAGAGGAGATAGTATCCAAAGCTAAAGAAGGCGATGCTACCACCACTTGA

Coding sequence (CDS)

ATGAATAAGACGTTACTGGAGCTTGACATGCGGTGTGAGCAGCTGATTCAAAGACAGTTTGATCAGAGCTGTAACTTTGACGTGGACGAAGCAGTTCACAAATTAGAGAAGTTGGGGATCGTTGTCTGGAACGGAACACAGGATGCGGATGTAGATTTGGGGAGTGCCAACAAGATCATAGGCATCACCACAGAGGAGATAGTATCCAAAGCTAAAGAAGGCGATGCTACCACCACTTGA

Protein sequence

MNKTLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDADVDLGSANKIIGITTEEIVSKAKEGDATTT*
Homology
BLAST of Chy6G119790 vs. ExPASy TrEMBL
Match: A0A6J1D2Z1 (uncharacterized protein LOC111016855 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016855 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T+ ELD RCE+LIQ QF QSCNFDVD+AVHKLEKLGIVV    +DAD     VDL SANK
Sbjct: 443 TIQELDKRCEELIQGQFGQSCNFDVDDAVHKLEKLGIVV----RDADGAYSCVDLRSANK 502

Query: 64  IIGITTEEIVSKAKEGDATTT 80
           IIG TTEEI+SKAKE DA+ T
Sbjct: 503 IIGTTTEEIISKAKEADASAT 519

BLAST of Chy6G119790 vs. ExPASy TrEMBL
Match: A0A6J1D4B7 (uncharacterized protein LOC111016855 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111016855 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T+ ELD RCE+LIQ QF QSCNFDVD+AVHKLEKLGIVV    +DAD     VDL SANK
Sbjct: 438 TIQELDKRCEELIQGQFGQSCNFDVDDAVHKLEKLGIVV----RDADGAYSCVDLRSANK 497

Query: 64  IIGITTEEIVSKAKEGDATTT 80
           IIG TTEEI+SKAKE DA+ T
Sbjct: 498 IIGTTTEEIISKAKEADASAT 514

BLAST of Chy6G119790 vs. ExPASy TrEMBL
Match: A0A6J1D1Z1 (uncharacterized protein LOC111016855 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016855 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T+ ELD RCE+LIQ QF QSCNFDVD+AVHKLEKLGIVV    +DAD     VDL SANK
Sbjct: 442 TIQELDKRCEELIQGQFGQSCNFDVDDAVHKLEKLGIVV----RDADGAYSCVDLRSANK 501

Query: 64  IIGITTEEIVSKAKEGDATTT 80
           IIG TTEEI+SKAKE DA+ T
Sbjct: 502 IIGTTTEEIISKAKEADASAT 518

BLAST of Chy6G119790 vs. ExPASy TrEMBL
Match: A0A6J1J295 (uncharacterized protein LOC111482053 OS=Cucurbita maxima OX=3661 GN=LOC111482053 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.1e-17
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T  ELDMRCE+LIQ QFDQSCNF+VD+AVHKLEKLGI++    +DAD     VDL SAN 
Sbjct: 411 TKQELDMRCEELIQVQFDQSCNFEVDDAVHKLEKLGILI----RDADGAYSCVDLRSAND 470

Query: 64  IIGITTEEIVSKAKE 74
           IIGITTEEIV+KAKE
Sbjct: 471 IIGITTEEIVNKAKE 481

BLAST of Chy6G119790 vs. ExPASy TrEMBL
Match: A0A6J1F2F4 (uncharacterized protein LOC111441529 OS=Cucurbita moschata OX=3662 GN=LOC111441529 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T  ELD RCE+LIQ QFDQSCNF+VD+AVHKLEKLGI++    +DAD     VDL SAN 
Sbjct: 431 TKQELDRRCEELIQVQFDQSCNFEVDDAVHKLEKLGILI----RDADGAYSCVDLRSAND 490

Query: 64  IIGITTEEIVSKAKE 74
           IIGITTEEIV+KAKE
Sbjct: 491 IIGITTEEIVNKAKE 501

BLAST of Chy6G119790 vs. NCBI nr
Match: XP_038892952.1 (uncharacterized protein LOC120081846 [Benincasa hispida])

HSP 1 Score: 107 bits (267), Expect = 5.14e-25
Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD--VDLGSANKIIG 63
           T  ELD+RCE+LI+ +FDQSCNFDVD+AVHKL+KLGI+V  G   A   VDL SANKIIG
Sbjct: 445 TKQELDLRCEELIKGEFDQSCNFDVDDAVHKLQKLGIIV-RGADGAYSCVDLRSANKIIG 504

Query: 64  ITTEEIVSKAKEGDATTT 79
           ITTEEIVSKAKEGDA+TT
Sbjct: 505 ITTEEIVSKAKEGDASTT 521

BLAST of Chy6G119790 vs. NCBI nr
Match: XP_022148091.1 (uncharacterized protein LOC111016855 isoform X3 [Momordica charantia])

HSP 1 Score: 104 bits (260), Expect = 4.67e-24
Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T+ ELD RCE+LIQ QF QSCNFDVD+AVHKLEKLGIVV    +DAD     VDL SANK
Sbjct: 438 TIQELDKRCEELIQGQFGQSCNFDVDDAVHKLEKLGIVV----RDADGAYSCVDLRSANK 497

Query: 64  IIGITTEEIVSKAKEGDATTT 79
           IIG TTEEI+SKAKE DA+ T
Sbjct: 498 IIGTTTEEIISKAKEADASAT 514

BLAST of Chy6G119790 vs. NCBI nr
Match: XP_022148090.1 (uncharacterized protein LOC111016855 isoform X2 [Momordica charantia])

HSP 1 Score: 104 bits (260), Expect = 4.75e-24
Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T+ ELD RCE+LIQ QF QSCNFDVD+AVHKLEKLGIVV    +DAD     VDL SANK
Sbjct: 442 TIQELDKRCEELIQGQFGQSCNFDVDDAVHKLEKLGIVV----RDADGAYSCVDLRSANK 501

Query: 64  IIGITTEEIVSKAKEGDATTT 79
           IIG TTEEI+SKAKE DA+ T
Sbjct: 502 IIGTTTEEIISKAKEADASAT 518

BLAST of Chy6G119790 vs. NCBI nr
Match: XP_022148089.1 (uncharacterized protein LOC111016855 isoform X1 [Momordica charantia])

HSP 1 Score: 104 bits (260), Expect = 4.77e-24
Identity = 58/81 (71.60%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T+ ELD RCE+LIQ QF QSCNFDVD+AVHKLEKLGIVV    +DAD     VDL SANK
Sbjct: 443 TIQELDKRCEELIQGQFGQSCNFDVDDAVHKLEKLGIVV----RDADGAYSCVDLRSANK 502

Query: 64  IIGITTEEIVSKAKEGDATTT 79
           IIG TTEEI+SKAKE DA+ T
Sbjct: 503 IIGTTTEEIISKAKEADASAT 519

BLAST of Chy6G119790 vs. NCBI nr
Match: XP_022983456.1 (uncharacterized protein LOC111482053 [Cucurbita maxima])

HSP 1 Score: 98.6 bits (244), Expect = 6.79e-22
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANK 63
           T  ELDMRCE+LIQ QFDQSCNF+VD+AVHKLEKLGI++    +DAD     VDL SAN 
Sbjct: 411 TKQELDMRCEELIQVQFDQSCNFEVDDAVHKLEKLGILI----RDADGAYSCVDLRSAND 470

Query: 64  IIGITTEEIVSKAKE 73
           IIGITTEEIV+KAKE
Sbjct: 471 IIGITTEEIVNKAKE 481

BLAST of Chy6G119790 vs. TAIR 10
Match: AT3G19340.1 (Protein of unknown function (DUF3754) )

HSP 1 Score: 74.3 bits (181), Expect = 4.9e-14
Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 0

Query: 4   TLLELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGT-QDADVDLGSANKIIGI 63
           TL +LD+RCE+LI+ +F   CNFDV++AV KLEKLGIV  +   +   + L  AN+IIG 
Sbjct: 412 TLEDLDLRCEELIKEEFGARCNFDVEDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGT 471

Query: 64  TTEEIVSKAKEG 75
           TTEE+V KAK+G
Sbjct: 472 TTEELVLKAKQG 483

BLAST of Chy6G119790 vs. TAIR 10
Match: AT5G13940.1 (aminopeptidases )

HSP 1 Score: 70.9 bits (172), Expect = 5.4e-13
Identity = 36/73 (49.32%), Postives = 55/73 (75.34%), Query Frame = 0

Query: 7   ELDMRCEQLIQRQFDQSCNFDVDEAVHKLEKLGIVVWNGTQDAD-----VDLGSANKIIG 66
           ELDM+ E  I+ +F++SCNFDVD+A+ KLEKLG+V    ++D++     V++  AN+I+G
Sbjct: 701 ELDMKSEAFIKEEFNESCNFDVDDAITKLEKLGLV----SRDSEDKYRCVEMKEANEIMG 760

Query: 67  ITTEEIVSKAKEG 75
            TTEE+V KA++G
Sbjct: 761 TTTEEMVLKARQG 769

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D2Z12.3e-1971.60uncharacterized protein LOC111016855 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1D4B72.3e-1971.60uncharacterized protein LOC111016855 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1D1Z12.3e-1971.60uncharacterized protein LOC111016855 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1J2952.1e-1772.00uncharacterized protein LOC111482053 OS=Cucurbita maxima OX=3661 GN=LOC111482053... [more]
A0A6J1F2F41.1e-1670.67uncharacterized protein LOC111441529 OS=Cucurbita moschata OX=3662 GN=LOC1114415... [more]
Match NameE-valueIdentityDescription
XP_038892952.15.14e-2574.36uncharacterized protein LOC120081846 [Benincasa hispida][more]
XP_022148091.14.67e-2471.60uncharacterized protein LOC111016855 isoform X3 [Momordica charantia][more]
XP_022148090.14.75e-2471.60uncharacterized protein LOC111016855 isoform X2 [Momordica charantia][more]
XP_022148089.14.77e-2471.60uncharacterized protein LOC111016855 isoform X1 [Momordica charantia][more]
XP_022983456.16.79e-2272.00uncharacterized protein LOC111482053 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G19340.14.9e-1455.56Protein of unknown function (DUF3754) [more]
AT5G13940.15.4e-1349.32aminopeptidases [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33645:SF5AMINOPEPTIDASEcoord: 6..77
NoneNo IPR availablePANTHERPTHR33645AMINOPEPTIDASE (DUF3754)coord: 6..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G119790.1Chy6G119790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane