Chy6G118220 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G118220
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	leucine-rich repeat extensin-like protein 3
Location	chrH06: 12046221 .. 12047760 (+)
RNA-Seq Expression	Chy6G118220
Synteny	Chy6G118220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGGCGCCTTCGGCCGCCATTTTACTCTCTTTTTCTTTCCTCTCCCATCTTCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATCGGTAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCTCCTCCTCCTCCATGTACCCCAACGGTGTCGTCTCCACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCTGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGCTTGGCTGTGGATCTTTGCATCTAATGGGGTTTAGTAAGTGATGAAGGATGAATAGCCATATAAAGCAAATTAATGTGTCCAATTTGATCTAATTACTAAAAGAAATATTTACTCTTAGTTCATCATAAAGTATAAGTATATATATAAATATATATATTATATGATCTTAATTATTAGATGCCTATTTATTTACCTTTTTTCCAACAAAATTTATTTAGTATTTTCTTTCAATATAATTTTGGAGTTATATATATTTTTGGTGTTGATAGGAATATTGAAGGTTACAAATTATTTGTGGTTGATATGTATTGTGATGTTGATGGATGCTTATACATTAATATATATGAAGATTTGTAAAGATGGAACAAAATTTAAAGAGACTTACAGAAGAATAATGTTGGAATTAGATTGTAGGCTTTATTAAAGTTACTTTTATTTTAGTATAGAATTTTAATAATAATTACATAGTTTCTCTTAACTGATTAATCACTATTTTGTGTTTTTTGAAATATAATTTTGTTTACATGATTGTACCTAATTCTTGTTCATATTTGAACGTGTTTGGACAAAGATTAGATGTGCACATAATTAAACTCATACATTCCTTTTTCTATCCGTAGTGTTAGTTGCACAAATCTTACTTAAACTTCTTTTTTTTTTTAATATATTTTTGGTTGAAATTTAAAAACAAAACCAAAATTTAAAAACTTCTTTCGAGTTTTGTCTGTAATCATTTGGTTTTTGAAAATTCTCTATTTTCTATCCATTTCTTACTAATGATTTTCTTTTTTATCTTAAGCACAAAAAAAAAAGCTAAATTTCAGAAACAAATACAAATATATATATATTCATAACTAAGATTAATTTTTGAAAACATTAGTATAGGTAACGAACAAGTGATAAATTTAGAATGAATGTTGGTAGACTTATTTTCTAAAACTAAAAACTAAGTTGCTAAATCAGTAATGACTTTCTTTTAAAAATGGGAAATAGATAAACAAAACTATATAACAAGAAGCTAAATAATAATTCTTTTTTTAACAGAAGAAAAAAGTTAGTTAGTAAATAGGTCTCTATGTGATTTTCTTATATGTATTTTTTTAAAAACAATTGATAGGTTTGGGAAAAGAATGGTGA

mRNA sequence

ATGAAAATGGCGCCTTCGGCCGCCATTTTACTCTCTTTTTCTTTCCTCTCCCATCTTCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATCGGTAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCTCCTCCTCCTCCATGTACCCCAACGGTGTCGTCTCCACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCTGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGCTTGGCTGTGGATCTTTGCATCTAATGGGGTTTAGTTTGGGAAAAGAATGGTGA

Coding sequence (CDS)

ATGAAAATGGCGCCTTCGGCCGCCATTTTACTCTCTTTTTCTTTCCTCTCCCATCTTCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATCGGTAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCTCCTCCTCCTCCATGTACCCCAACGGTGTCGTCTCCACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCTGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGCTTGGCTGTGGATCTTTGCATCTAATGGGGTTTAGTTTGGGAAAAGAATGGTGA

Protein sequence

MKMAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVALGCGSLHLMGFSLGKEW*

Homology

[Close]

BLAST of Chy6G118220 vs. ExPASy TrEMBL
Match: A0A0A0L7R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.0e-69
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFLSHLLLLANSQTSSPI VDPQNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPP----PCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPP    PCTPTVSS PPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTRRTRPGMAAVVVALGCGSLHLMGFS 147
           YFSGTRRTRPGMAAV VA+GCG+LHLMGFS
Sbjct: 121 YFSGTRRTRPGMAAVAVAIGCGALHLMGFS 150

[Close]

BLAST of Chy6G118220 vs. ExPASy TrEMBL
Match: A0A5A7V4T2 (Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00500 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64
Identity = 134/145 (92.41%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62
           M  SAAILLSFSFLS LLLLA+SQTSSPIS+DPQNPDAEIKCGSCPCSNPCIQQLSPPPP
Sbjct: 1   MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 60

Query: 63  PPPPP-PCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT 122
           PPPPP PCTPTVSS PPPPRFIYT SSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT
Sbjct: 61  PPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT 120

Query: 123 RRTRPGMAAVVVALGCGSLHLMGFS 147
             TRPGMAAVVVALGCG+LHLMGFS
Sbjct: 121 TGTRPGMAAVVVALGCGALHLMGFS 145

[Close]

BLAST of Chy6G118220 vs. ExPASy TrEMBL
Match: A0A6J1J7W0 (probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=LOC111482528 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44
Identity = 104/143 (72.73%), Postives = 115/143 (80.42%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62
           MAPSAAI LS SFL   L LANSQ  SP  VDPQ+P++EIKCGSCPCSNPC++Q  PPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSP--VDPQDPNSEIKCGSCPCSNPCVKQF-PPPP 60

Query: 63  PPPPPPCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTR 122
           PPPPP C P +  PPPPPRFIYT+ SP PPPPRF YTTGVPGNLY+IDANN WYYFSGT 
Sbjct: 61  PPPPPNCKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTGVPGNLYQIDANNRWYYFSGTT 120

Query: 123 RTRPGMAAVVVALGCGSLHLMGF 146
           R     AA+VVALGCG+L+LM F
Sbjct: 121 RNWSATAALVVALGCGALNLMAF 139

[Close]

BLAST of Chy6G118220 vs. ExPASy TrEMBL
Match: A0A6J1GAW3 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452509 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-24
Identity = 82/145 (56.55%), Postives = 89/145 (61.38%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCP-CSNPCIQQLSPPP 62
           MAPSAAI LS       LLL+  QTS PIS  P +PD EI C S   CSNP +QQL P P
Sbjct: 1   MAPSAAIFLS-------LLLSFIQTSPPISASPLDPDTEINCDSTTLCSNPSVQQLQPSP 60

Query: 63  PPPPPPPCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT 122
           P PPP         P PPPRF YTT S  PPP RF YTTGVP +LY+ D  N WYYFSG 
Sbjct: 61  PLPPP---------PLPPPRFTYTTLSSPPPPLRFIYTTGVPSDLYQNDEKNRWYYFSGA 120

Query: 123 RRTRPGMAA-VVVALGCGSLHLMGF 146
               P MAA VVV L CG+L L+ F
Sbjct: 121 VGKPPAMAALVVVGLACGALDLIVF 129

[Close]

BLAST of Chy6G118220 vs. ExPASy TrEMBL
Match: A0A061EG52 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_019232 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 9.7e-19
Identity = 65/136 (47.79%), Postives = 79/136 (58.09%), Query Frame = 0


Query: 9   ILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPP 68
           ++LS SFL  ++            V PQ P  EIKCG+CPC NPC QQ  PPPPPPPP  
Sbjct: 19  LILSISFLIPIIASTKKLEEIVPVVVPQAPTTEIKCGTCPCVNPCGQQSLPPPPPPPP-- 78

Query: 69  CTPTVSSPPPPPRFIYTTSSP-APPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPG 128
                 SPPPPPRF Y    P  PPPPRF Y TGVPG LY  DA++ W +FS   R   G
Sbjct: 79  ------SPPPPPRFTYCNPVPMTPPPPRFYYVTGVPGQLYTADADDRWTFFSSAGRDDIG 138

Query: 129 MAAVVVALGCGSLHLM 144
           +  ++++ G G L L+
Sbjct: 139 I--LLLSFGFGLLGLL 144

[Close]

BLAST of Chy6G118220 vs. NCBI nr
Match: XP_011651408.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])

HSP 1 Score: 270 bits (691), Expect = 8.29e-91
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFLSHLLLLANSQTSSPI VDPQNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPPP----CTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPPP    CTPTVSS PPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTRRTRPGMAAVVVALGCGSLHLMGFS 146
           YFSGTRRTRPGMAAV VA+GCG+LHLMGFS
Sbjct: 121 YFSGTRRTRPGMAAVAVAIGCGALHLMGFS 150

[Close]

BLAST of Chy6G118220 vs. NCBI nr
Match: KAE8650628.1 (hypothetical protein Csa_011452 [Cucumis sativus])

HSP 1 Score: 270 bits (690), Expect = 2.25e-90
Identity = 140/153 (91.50%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFLSHLLLLANSQTSSPI VDPQNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPPP----CTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPPP    CTPTVSS PPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTRRTRPGMAAVVVALGCGSLHLMGFSLGK 149
           YFSGTRRTRPGMAAV VA+GCG+LHLMGF + K
Sbjct: 121 YFSGTRRTRPGMAAVAVAIGCGALHLMGFRILK 153

[Close]

BLAST of Chy6G118220 vs. NCBI nr
Match: KAA0060761.1 (formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (653), Expect = 4.34e-85
Identity = 134/145 (92.41%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 3   MAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62
           M  SAAILLSFSFLS LLLLA+SQTSSPIS+DPQNPDAEIKCGSCPCSNPCIQQLSPPPP
Sbjct: 1   MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 60

Query: 63  PPPPP-PCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT 122
           PPPPP PCTPTVSS PPPPRFIYT SSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT
Sbjct: 61  PPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGT 120

Query: 123 RRTRPGMAAVVVALGCGSLHLMGFS 146
             TRPGMAAVVVALGCG+LHLMGFS
Sbjct: 121 TGTRPGMAAVVVALGCGALHLMGFS 145

[Close]

BLAST of Chy6G118220 vs. NCBI nr
Match: KAE8653002.1 (hypothetical protein Csa_004575 [Cucumis sativus])

HSP 1 Score: 231 bits (589), Expect = 2.55e-75
Identity = 122/129 (94.57%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAP AAILLSFSFLSHLLLLANSQTSSPI VDPQNPDAEIKCGSCPCSNPCIQQLSPP
Sbjct: 1   MKMAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60

Query: 61  PPPPPPPP----CTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120
           PPPPPPPP    CTPTVSS PPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY
Sbjct: 61  PPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWY 120

Query: 121 YFSGTRRTR 125
           YFSGTRRTR
Sbjct: 121 YFSGTRRTR 129

[Close]

BLAST of Chy6G118220 vs. NCBI nr
Match: XP_023528316.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199 bits (507), Expect = 7.12e-63
Identity = 106/146 (72.60%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MKMAPSAAILLSFSFLSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPP 60
           MKMAPSAAI LS SFL   L LA+SQ  SP  VDPQ+P++EIKCGSCPCSNPC++Q  PP
Sbjct: 1   MKMAPSAAIPLSLSFLFLFLHLADSQPFSP--VDPQDPNSEIKCGSCPCSNPCVKQFPPP 60

Query: 61  PPPPPPPPCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSG 120
           PPPPPPP C P +  PPPPPRFIYT  SP PPPPRF YTTGVPGNLY+IDANN WYYFSG
Sbjct: 61  PPPPPPPNCKPALPPPPPPPRFIYTALSP-PPPPRFIYTTGVPGNLYQIDANNRWYYFSG 120

Query: 121 TRRTRPGMAAVVVALGCGSLHLMGFS 146
           T R RP  A +VVALGCG+L+LM F 
Sbjct: 121 TTRNRPATAVLVVALGCGALNLMAFG 143

[Close]

BLAST of Chy6G118220 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.9e-08
Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 0


Query: 22  LANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQ---LSPPPPPPPPPPCTPTVSSPPP 81
           L N  +SS  S++ +  D   +     CS  CIQ     SPPPP PPPP C P  + PPP
Sbjct: 27  LINGSSSSDASLEARKLD---EVDPIKCSPSCIQNPPPPSPPPPSPPPPACPPPPALPPP 86

Query: 82  PPRFIYTTSSPAPPPPRFTYTTGVPGNLYEID 111
           PP+ + ++  P PPP  F Y TG PGNLY +D
Sbjct: 87  PPKKV-SSYCPPPPPANFLYITGPPGNLYPVD 114

[Close]

BLAST of Chy6G118220 vs. TAIR 10
Match: AT3G03350.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.9e-08
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 77  PPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAL 136
           PPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S   R       V+V +
Sbjct: 30  PPPPRKTYCSKSSSSPPPPKYMYVTGVPGELYRTEPDDQWGYNSSVNRNLVKCLLVIVIV 89

Query: 137 GCGSLH 142
           G G ++
Sbjct: 90  GFGVIN 95

[Close]

BLAST of Chy6G118220 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 41/103 (39.81%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 16  LSHLLLLANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPCTPTVSS 75
           L+  +L+A    +SPI ++ ++  AE+         PC+Q   PPPP PPPP CTP+   
Sbjct: 11  LAATILMAIVILASPIIINAEDSSAEVDVNCI----PCLQNQPPPPPSPPPPSCTPSPPP 70

Query: 76  P-PPPPRFIYTTSSPAPPPPR-------FTYTTGVPGNLYEID 111
           P PPPP+      SP PPPP        FTY    PG+LY I+
Sbjct: 71  PSPPPPKKSSCPPSPLPPPPPPPPPNYVFTYP---PGDLYPIE 106

[Close]

BLAST of Chy6G118220 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.9e-04
Identity = 40/109 (36.70%), Postives = 54/109 (49.54%), Query Frame = 0


Query: 4   APSAAILLSFSFLSHLLLL--ANSQTSSPISVDPQNPDAEIKCGSCPCSNPCIQQLSPPP 63
           A +A +L +  FL+  +++  ++S T+  +  DP      IKC       PC+Q + PP 
Sbjct: 48  ALAATLLTTVVFLTFPMIINASDSSTNRKLEEDP------IKC------TPCLQNIPPPS 107

Query: 64  PPPPPPPCTPTVSSPPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEID 111
           PPPP PP       PPP P      S   PPP  + Y TG PG LY ID
Sbjct: 108 PPPPSPPPPSQACPPPPLPPSPPKKSYCPPPPSTYIYMTGPPGELYPID 144

The following BLAST results are available for this feature:

BLAST of Chy6G118220 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G118220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7R0	6.0e-69	93.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1	[more]
A0A5A7V4T2	1.5e-64	92.41	Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A6J1J7W0	2.3e-44	72.73	probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GAW3	2.0e-24	56.55	leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A061EG52	9.7e-19	47.79	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_019232 PE=4 SV=1	[more]

BLAST of Chy6G118220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651408.1	8.29e-91	93.33	leucine-rich repeat extensin-like protein 3 [Cucumis sativus]	[more]
KAE8650628.1	2.25e-90	91.50	hypothetical protein Csa_011452 [Cucumis sativus]	[more]
KAA0060761.1	4.34e-85	92.41	formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein...	[more]
KAE8653002.1	2.55e-75	94.57	hypothetical protein Csa_004575 [Cucumis sativus]	[more]
XP_023528316.1	7.12e-63	72.60	leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy6G118220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	9.9e-08	44.57	hydroxyproline-rich glycoprotein family protein	[more]
AT3G03350.2	9.9e-08	42.42	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G02405.1	1.6e-05	39.81	proline-rich family protein	[more]
AT1G70990.1	3.9e-04	36.70	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..95
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 90..143 coord: 5..89
None	No IPR available	PANTHER	PTHR35094:SF7	PROTEIN, PUTATIVE-RELATED	coord: 90..143 coord: 5..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G118220.1	Chy6G118220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane