Chy6G112470 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGGACTCAGTGTAATCTTAGAAACTCGGAAACGCGACGTCGTCACTGAGTCAACTCGTCAAGTCATTGACAAAACTACCCTTATCATGATTAACAACAACAACCACAACCACCGCCTTCGCCACCACTCTCTTGCTTCTTCTTCTAAATCTCCAAGATTTCTGGAGCGATGCTTTCTGTGCGCCCAGAAGTTTCTCCCCGGAAAGGACATCTATATGTACCAGTAAGTAGTTAATATTTAACCCCTTTTTTTCTTTTTATTAAAAAATAGTTATTTATATTTATATACATACACAGAGGGGACAAGGGTTTCTGCAGTGAAGAGTGCAGATGCCGGCAGATGTTCATGGACGAAGAAGAAACAATGGTAGATGCCGGAAACTGCTCCTTCTCCGCCGCCATTAACCAACAAACCACCGCTACTTCTCCCTCTCCTCCACCTTCTCGCCTCCCTAAACCCACCAAAAACCACTCCACAGGTTTTGCTTACTGA ATGGTAGGACTCAGTGTAATCTTAGAAACTCGGAAACGCGACGTCGTCACTGAGTCAACTCGTCAAGTCATTGACAAAACTACCCTTATCATGATTAACAACAACAACCACAACCACCGCCTTCGCCACCACTCTCTTGCTTCTTCTTCTAAATCTCCAAGATTTCTGGAGCGATGCTTTCTGTGCGCCCAGAAGTTTCTCCCCGGAAAGGACATCTATATGTACCAAGGGGACAAGGGTTTCTGCAGTGAAGAGTGCAGATGCCGGCAGATGTTCATGGACGAAGAAGAAACAATGGTAGATGCCGGAAACTGCTCCTTCTCCGCCGCCATTAACCAACAAACCACCGCTACTTCTCCCTCTCCTCCACCTTCTCGCCTCCCTAAACCCACCAAAAACCACTCCACAGGTTTTGCTTACTGA ATGGTAGGACTCAGTGTAATCTTAGAAACTCGGAAACGCGACGTCGTCACTGAGTCAACTCGTCAAGTCATTGACAAAACTACCCTTATCATGATTAACAACAACAACCACAACCACCGCCTTCGCCACCACTCTCTTGCTTCTTCTTCTAAATCTCCAAGATTTCTGGAGCGATGCTTTCTGTGCGCCCAGAAGTTTCTCCCCGGAAAGGACATCTATATGTACCAAGGGGACAAGGGTTTCTGCAGTGAAGAGTGCAGATGCCGGCAGATGTTCATGGACGAAGAAGAAACAATGGTAGATGCCGGAAACTGCTCCTTCTCCGCCGCCATTAACCAACAAACCACCGCTACTTCTCCCTCTCCTCCACCTTCTCGCCTCCCTAAACCCACCAAAAACCACTCCACAGGTTTTGCTTACTGA MVGLSVILETRKRDVVTESTRQVIDKTTLIMINNNNHNHRLRHHSLASSSKSPRFLERCFLCAQKFLPGKDIYMYQGDKGFCSEECRCRQMFMDEEETMVDAGNCSFSAAINQQTTATSPSPPPSRLPKPTKNHSTGFAY* Homology
BLAST of Chy6G112470 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14 Identity = 57/164 (34.76%), Postives = 76/164 (46.34%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.8e-09 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.4e-08 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy Swiss-Prot
Match: Q8LGS1 (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=1 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 9.0e-08 Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07 Identity = 32/85 (37.65%), Postives = 45/85 (52.94%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy TrEMBL
Match: A0A0A0L925 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164460 PE=3 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.7e-65 Identity = 130/144 (90.28%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy TrEMBL
Match: A0A5D3D154 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001170 PE=3 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 8.6e-62 Identity = 125/144 (86.81%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy TrEMBL
Match: A0A1S3AY62 (uncharacterized protein LOC103483860 OS=Cucumis melo OX=3656 GN=LOC103483860 PE=3 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 8.6e-62 Identity = 125/144 (86.81%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy TrEMBL
Match: A0A6J1IC26 (uncharacterized protein LOC111472297 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472297 PE=3 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 4.3e-45 Identity = 99/148 (66.89%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of Chy6G112470 vs. ExPASy TrEMBL
Match: A0A6J1FRH3 (uncharacterized protein LOC111448140 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448140 PE=3 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 4.3e-45 Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 0
BLAST of Chy6G112470 vs. NCBI nr
Match: XP_004134222.1 (FCS-Like Zinc finger 15 [Cucumis sativus] >KGN57127.1 hypothetical protein Csa_009915 [Cucumis sativus]) HSP 1 Score: 256 bits (655), Expect = 1.16e-85 Identity = 130/144 (90.28%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of Chy6G112470 vs. NCBI nr
Match: XP_008438900.1 (PREDICTED: uncharacterized protein LOC103483860 [Cucumis melo] >KAA0049509.1 senescence-associated family protein [Cucumis melo var. makuwa] >TYK16189.1 senescence-associated family protein [Cucumis melo var. makuwa]) HSP 1 Score: 245 bits (626), Expect = 3.18e-81 Identity = 125/144 (86.81%), Postives = 132/144 (91.67%), Query Frame = 0
BLAST of Chy6G112470 vs. NCBI nr
Match: XP_038882229.1 (FCS-Like Zinc finger 15-like [Benincasa hispida]) HSP 1 Score: 238 bits (606), Expect = 3.11e-78 Identity = 121/141 (85.82%), Postives = 130/141 (92.20%), Query Frame = 0
BLAST of Chy6G112470 vs. NCBI nr
Match: XP_022943356.1 (uncharacterized protein LOC111448140 isoform X1 [Cucurbita moschata]) HSP 1 Score: 190 bits (483), Expect = 1.72e-59 Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 0
BLAST of Chy6G112470 vs. NCBI nr
Match: XP_022973720.1 (uncharacterized protein LOC111472297 isoform X1 [Cucurbita maxima]) HSP 1 Score: 190 bits (482), Expect = 3.15e-59 Identity = 99/148 (66.89%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of Chy6G112470 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15 Identity = 57/164 (34.76%), Postives = 76/164 (46.34%), Query Frame = 0
BLAST of Chy6G112470 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 0
BLAST of Chy6G112470 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 60.1 bits (144), Expect = 1.7e-09 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Chy6G112470 vs. TAIR 10
Match: AT3G63210.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 58.2 bits (139), Expect = 6.4e-09 Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of Chy6G112470 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 27/61 (44.26%), Postives = 33/61 (54.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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