Chy6G111090 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G111090
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	preprotein translocase subunit SECE1
Location	chrH06: 3942590 .. 3943129 (+)
RNA-Seq Expression	Chy6G111090
Synteny	Chy6G111090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCGTCCTTGTTCGTACCACTACGGCGGAGCTCCCCTCATCATTCTCATCCTCACTTACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGCTAAGTTCTCCGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGGATGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGCTCTGCTCACTGTGAATGCCTTGTTGGCAGAACTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

mRNA sequence

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCGTCCTTGTTCGTACCACTACGGCGGAGCTCCCCTCATCATTCTCATCCTCACTTACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGCTAAGTTCTCCGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGGATGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGCTCTGCTCACTGTGAATGCCTTGTTGGCAGAACTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

Coding sequence (CDS)

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCGTCCTTGTTCGTACCACTACGGCGGAGCTCCCCTCATCATTCTCATCCTCACTTACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGCTAAGTTCTCCGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGGATGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGCTCTGCTCACTGTGAATGCCTTGTTGGCAGAACTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

Protein sequence

MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAVNAVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS*

Homology

[Close]

BLAST of Chy6G111090 vs. ExPASy Swiss-Prot
Match: O23342 (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 43  IRFPTIRSNRNAKFSAVNAVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEI 102
           IR  T  + R +      A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVN 162
           + A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSV LLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

[Close]

BLAST of Chy6G111090 vs. ExPASy TrEMBL
Match: A0A0A0L5J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.8e-87
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPH QHTIRFPTIRSNRN KFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDG+EVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Chy6G111090 vs. ExPASy TrEMBL
Match: A0A1S3AWM4 (preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.6e-83
Identity = 171/180 (95.00%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAV 60
           MAVPISLKFPTVPSTLTNRTASLFVP LR+SS HHSHPH QHTIR PTIRSNRN KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDG+EVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Chy6G111090 vs. ExPASy TrEMBL
Match: A0A5D3D089 (Preprotein translocase subunit SECE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00410 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 171/180 (95.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAV 60
           MAVPI LKFPTVPSTLTNRTASLFVP LRRSS HHSHPH QHTIR PTIRSNRN KFSAV
Sbjct: 1   MAVPIYLKFPTVPSTLTNRTASLFVPLLRRSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDG+EVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Chy6G111090 vs. ExPASy TrEMBL
Match: A0A6J1GWU8 (preprotein translocase subunit SECE1 OS=Cucurbita moschata OX=3662 GN=LOC111457882 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.0e-75
Identity = 157/179 (87.71%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAVN 60
           MAVPISL+FPTVPST TNR ASLFV LRRSS +HSHPHL  TIR P IRS RN+ FSAVN
Sbjct: 1   MAVPISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60

Query: 61  AVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDG+EVQAGPP EE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Chy6G111090 vs. ExPASy TrEMBL
Match: A0A6J1IW64 (preprotein translocase subunit SECE1 OS=Cucurbita maxima OX=3661 GN=LOC111479153 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.6e-75
Identity = 156/179 (87.15%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAVN 60
           MAVPISL+FP VPSTLT+R ASLFV LRRSS H SHPH   TIR P +RS RN+KFSAVN
Sbjct: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60

Query: 61  AVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDG+EVQAGPPTEE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Chy6G111090 vs. NCBI nr
Match: XP_004134136.1 (preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical protein Csa_011409 [Cucumis sativus])

HSP 1 Score: 330 bits (846), Expect = 1.53e-113
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPH QHTIRFPTIRSNRN KFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDG+EVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 179
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Chy6G111090 vs. NCBI nr
Match: XP_008438678.1 (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo])

HSP 1 Score: 317 bits (811), Expect = 3.44e-108
Identity = 171/180 (95.00%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPL-RRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAV 60
           MAVPISLKFPTVPSTLTNRTASLFVPL R+SS HHSHPH QHTIR PTIRSNRN KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDG+EVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 179
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Chy6G111090 vs. NCBI nr
Match: KAA0049363.1 (preprotein translocase subunit SECE1 [Cucumis melo var. makuwa] >TYK17195.1 preprotein translocase subunit SECE1 [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (809), Expect = 6.94e-108
Identity = 171/180 (95.00%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPL-RRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAV 60
           MAVPI LKFPTVPSTLTNRTASLFVPL RRSS HHSHPH QHTIR PTIRSNRN KFSAV
Sbjct: 1   MAVPIYLKFPTVPSTLTNRTASLFVPLLRRSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDG+EVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 179
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of Chy6G111090 vs. NCBI nr
Match: XP_038896581.1 (preprotein translocase subunit SECE1 [Benincasa hispida])

HSP 1 Score: 303 bits (777), Expect = 5.05e-103
Identity = 163/179 (91.06%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAVN 60
           MAVPISLKFPTVPSTLTNR+ASLF+ LRRSS HHSHPH QHTIR PTIR  R   FSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRSASLFLSLRRSSAHHSHPHSQHTIRLPTIRFIRKINFSAVN 60

Query: 61  AVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTES+G+EVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESNGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 179
           VAEEIKEIEWPAF+KVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFQKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Chy6G111090 vs. NCBI nr
Match: XP_023528201.1 (preprotein translocase subunit SECE1 [Cucurbita pepo subsp. pepo] >KAG6582298.1 Preprotein translocase subunit SECE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (749), Expect = 9.34e-99
Identity = 158/179 (88.27%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHLQHTIRFPTIRSNRNAKFSAVN 60
           MAVPISL+FPTVPSTLTNR ASLFV LRRSS +HSHPHL  TIR P IRS RN+ FSAVN
Sbjct: 1   MAVPISLRFPTVPSTLTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60

Query: 61  AVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDG+EVQAGPP EE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVNALLAELSDRVFAGKGVQDFFS 179
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSV LLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of Chy6G111090 vs. TAIR 10
Match: AT4G14870.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 43  IRFPTIRSNRNAKFSAVNAVQESQENTESDGMEVQAGPPTEEPKTADQSAESGANLGAEI 102
           IR  T  + R +      A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVALLTVN 162
           + A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSV LLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

The following BLAST results are available for this feature:

BLAST of Chy6G111090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23342	2.5e-26	49.65	Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE...	[more]

BLAST of Chy6G111090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5J0	5.8e-87	97.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1	[more]
A0A1S3AWM4	6.6e-83	95.00	preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=...	[more]
A0A5D3D089	1.1e-82	95.00	Preprotein translocase subunit SECE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1GWU8	3.0e-75	87.71	preprotein translocase subunit SECE1 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]
A0A6J1IW64	6.6e-75	87.15	preprotein translocase subunit SECE1 OS=Cucurbita maxima OX=3661 GN=LOC111479153...	[more]

BLAST of Chy6G111090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134136.1	1.53e-113	97.77	preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical ...	[more]
XP_008438678.1	3.44e-108	95.00	PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]	[more]
KAA0049363.1	6.94e-108	95.00	preprotein translocase subunit SECE1 [Cucumis melo var. makuwa] >TYK17195.1 prep...	[more]
XP_038896581.1	5.05e-103	91.06	preprotein translocase subunit SECE1 [Benincasa hispida]	[more]
XP_023528201.1	9.34e-99	88.27	preprotein translocase subunit SECE1 [Cucurbita pepo subsp. pepo] >KAG6582298.1 ...	[more]

BLAST of Chy6G111090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14870.1	1.7e-27	49.65	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038379	SecE superfamily	GENE3D	1.20.5.1030	Preprotein translocase secy subunit	coord: 115..166 e-value: 5.1E-5 score: 25.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	PANTHER	PTHR37240	PREPROTEIN TRANSLOCASE SUBUNIT SECE1	coord: 4..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G111090.1	Chy6G111090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008320	protein transmembrane transporter activity