Chy6G109510 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGAGGGCGGACGTCGACGGCACCTTCTAGAAAGGTTATGGTGGTAGTAGATCCTACCCGAGAGTCCGCCGCTGCACTCCAGTATGCTCTTTCGCATGCTCTTATGGATAATGATCAGGTAATTCTCCTCCATATCGATAACCCTAATTCTTGGAGGAACGCTATTTCTACGTTCCTTAAGAGACCTAATGGTGGTGGATCTACTAATAGTAATAATAATAATAATGTTCATGCTGCCGCTACTGCCACTGCCGCTTCCGACGGTGGACAAGGAGGAGTTACGGCGGAGGTTGATTTTCTTGAGGAGATGAAGAAGGCCTGTAAGAATGCTCATCCGAAACTGAAAGTGGGGACGTTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAAATCTCTCGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCTATCTTAGGGTTTGTCTTCTTCTTCCTTCCCTCCCTCCCTCCATCAATGAAATTCATTTTCTTTCATGATTTTGATCGAGATGGTTTTGAATGTGTATGAGCATGTATCTTTTAAGTCAAGTAGGTTTGGTTCGATGTGCGTGTATTCCTTTATAGATGGATTTGACAAAGACTCGTAGAAAATGAATTCAATTCATAGCGGTCCTATTGACAAAGACCCATAAGTCAATTTTGTTATTCCTTCAATTTCTTCGGTATCGGAATGTTATTGGATTAGGTAGGTTATTTTGAAAGATTAGTGGGGTGGACGGGAGTTTGGCTTAGCAAATTAATAAACAAGAAAAACTAAGGTTTTATAAGGATATAAGATAATTTAGATCATGTTATGAAGGTCAAATATGTGCTAACTTGTTGACTTGAATATGTCTTGGAGATTTGTAGTCGAGTAGGTTAAGTTGGTTAAGAGATGCATATCAGGTGGAGCAAAAACTGATGACAAATAAAAGACAATGGAAAAGTTGAATGTTTCTTAAAAAAAAAAAGAGTCAGTAGATTCTAATTGACAATTAGATAGTTCAAAACAAAGAATATCATGAATTTGTTGGGTAGAATGAGGAATCAATATTTCTTGAAGATCCGTAGCTAAATGTTTAGACTCCATAGTATAATCATTTGATTTTTTATTTTTGAAAATCAAGCTTTTTCGGAATCCACTGACATAGATGTTTGCAAAACTCAAGTAAAAGCTTTGAACACTAAACAAAGATTTAAATCTGTGTTTTTTCTTTTGGAATGGGCTATGAATTCAAATATTTAGTTATAAAAGAAAAAACCATTTGTAAAGAAATTGAAGATATCAAGCATAATATCCAAAACCAAATACTTATCCAGCAAAGTTAGAATGTTTTCCAACTTTAAGCAGCTGGGAAGAATAGTTGATAATTTGAAACGCATATATGTGTCAACCCTTTTGTGACATAGGTCTCTATGGGTCCTTTTCAATTGAATATTGGAAGTTTATCTTCTCTTCTCTTCTTCTTTTTCTTTTTTCTTTGTTCCAACTATATGAGGATGGAGAGCTTCAAAACCTCTATAATTTTTTCATCGTAAATATATGTCTCAATCAGTTAAAGCTATTTATTTGTTTAAATGCAGATATAGAAGGACAGGAGGGGCAATGAAAGGGGCAAAAATGTTGGACACAGCAGAGTATTTGATTGAGAACAGCAAATGCACTTGTGTTGCTGTACAAAAGAAGGGACAAAATGCAGGCTATCTTTTAAACACCAAAACCCACAGAAACTTCTGGCTCCTGGCTTGA ATGGGAGGAGGGCGGACGTCGACGGCACCTTCTAGAAAGGTTATGGTGGTAGTAGATCCTACCCGAGAGTCCGCCGCTGCACTCCAGTATGCTCTTTCGCATGCTCTTATGGATAATGATCAGGTAATTCTCCTCCATATCGATAACCCTAATTCTTGGAGGAACGCTATTTCTACGTTCCTTAAGAGACCTAATGGTGGTGGATCTACTAATAGTAATAATAATAATAATGTTCATGCTGCCGCTACTGCCACTGCCGCTTCCGACGGTGGACAAGGAGGAGTTACGGCGGAGGTTGATTTTCTTGAGGAGATGAAGAAGGCCTGTAAGAATGCTCATCCGAAACTGAAAGTGGGGACGTTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAAATCTCTCGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCTATCTTAGGATATAGAAGGACAGGAGGGGCAATGAAAGGGGCAAAAATGTTGGACACAGCAGAGTATTTGATTGAGAACAGCAAATGCACTTGTGTTGCTGTACAAAAGAAGGGACAAAATGCAGGCTATCTTTTAAACACCAAAACCCACAGAAACTTCTGGCTCCTGGCTTGA ATGGGAGGAGGGCGGACGTCGACGGCACCTTCTAGAAAGGTTATGGTGGTAGTAGATCCTACCCGAGAGTCCGCCGCTGCACTCCAGTATGCTCTTTCGCATGCTCTTATGGATAATGATCAGGTAATTCTCCTCCATATCGATAACCCTAATTCTTGGAGGAACGCTATTTCTACGTTCCTTAAGAGACCTAATGGTGGTGGATCTACTAATAGTAATAATAATAATAATGTTCATGCTGCCGCTACTGCCACTGCCGCTTCCGACGGTGGACAAGGAGGAGTTACGGCGGAGGTTGATTTTCTTGAGGAGATGAAGAAGGCCTGTAAGAATGCTCATCCGAAACTGAAAGTGGGGACGTTGAGAGTTGAATTGGAAGGCAAAGACAAAGCCTCCATGATTATGGCTCAAACCAAATCTCTCGGTGTTGATCTGCTAGTCATAGGGCAGAGGCGAAGTCTCTCCACAGCTATCTTAGGATATAGAAGGACAGGAGGGGCAATGAAAGGGGCAAAAATGTTGGACACAGCAGAGTATTTGATTGAGAACAGCAAATGCACTTGTGTTGCTGTACAAAAGAAGGGACAAAATGCAGGCTATCTTTTAAACACCAAAACCCACAGAAACTTCTGGCTCCTGGCTTGA MGGGRTSTAPSRKVMVVVDPTRESAAALQYALSHALMDNDQVILLHIDNPNSWRNAISTFLKRPNGGGSTNSNNNNNVHAAATATAASDGGQGGVTAEVDFLEEMKKACKNAHPKLKVGTLRVELEGKDKASMIMAQTKSLGVDLLVIGQRRSLSTAILGYRRTGGAMKGAKMLDTAEYLIENSKCTCVAVQKKGQNAGYLLNTKTHRNFWLLA* Homology
BLAST of Chy6G109510 vs. ExPASy TrEMBL
Match: A0A0A0L6Y4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134530 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110 Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Chy6G109510 vs. ExPASy TrEMBL
Match: A0A5A7U1M3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002120 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 8.4e-109 Identity = 206/215 (95.81%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Chy6G109510 vs. ExPASy TrEMBL
Match: A0A1S3AWE0 (uncharacterized protein LOC103483538 OS=Cucumis melo OX=3656 GN=LOC103483538 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 8.4e-109 Identity = 206/215 (95.81%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Chy6G109510 vs. ExPASy TrEMBL
Match: A0A6J1IW69 (uncharacterized protein LOC111479780 OS=Cucurbita maxima OX=3661 GN=LOC111479780 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 2.2e-85 Identity = 174/219 (79.45%), Postives = 189/219 (86.30%), Query Frame = 0
BLAST of Chy6G109510 vs. ExPASy TrEMBL
Match: A0A6J1E9S8 (uncharacterized protein LOC111432005 OS=Cucurbita moschata OX=3662 GN=LOC111432005 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.9e-84 Identity = 174/227 (76.65%), Postives = 189/227 (83.26%), Query Frame = 0
BLAST of Chy6G109510 vs. NCBI nr
Match: XP_004134033.1 (uncharacterized protein LOC101222608 [Cucumis sativus] >KGN56804.1 hypothetical protein Csa_011229 [Cucumis sativus]) HSP 1 Score: 409 bits (1052), Expect = 8.93e-144 Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Chy6G109510 vs. NCBI nr
Match: XP_008438448.1 (PREDICTED: uncharacterized protein LOC103483538 [Cucumis melo] >KAA0049204.1 uncharacterized protein E6C27_scaffold171G004420 [Cucumis melo var. makuwa] >TYK17355.1 uncharacterized protein E5676_scaffold434G002120 [Cucumis melo var. makuwa]) HSP 1 Score: 403 bits (1036), Expect = 2.46e-141 Identity = 206/215 (95.81%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of Chy6G109510 vs. NCBI nr
Match: XP_038881793.1 (homeobox protein 5 [Benincasa hispida]) HSP 1 Score: 374 bits (960), Expect = 1.30e-129 Identity = 194/224 (86.61%), Postives = 206/224 (91.96%), Query Frame = 0
BLAST of Chy6G109510 vs. NCBI nr
Match: XP_023527285.1 (uncharacterized protein LOC111790565 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 326 bits (835), Expect = 1.33e-110 Identity = 175/223 (78.48%), Postives = 190/223 (85.20%), Query Frame = 0
BLAST of Chy6G109510 vs. NCBI nr
Match: XP_022980405.1 (uncharacterized protein LOC111479780 [Cucurbita maxima]) HSP 1 Score: 325 bits (834), Expect = 1.64e-110 Identity = 174/219 (79.45%), Postives = 189/219 (86.30%), Query Frame = 0
BLAST of Chy6G109510 vs. TAIR 10
Match: AT4G13450.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 222.2 bits (565), Expect = 3.9e-58 Identity = 118/218 (54.13%), Postives = 160/218 (73.39%), Query Frame = 0
BLAST of Chy6G109510 vs. TAIR 10
Match: AT4G13450.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31 Identity = 78/165 (47.27%), Postives = 113/165 (68.48%), Query Frame = 0
BLAST of Chy6G109510 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.7e-19 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 0
BLAST of Chy6G109510 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 6.3e-16 Identity = 61/203 (30.05%), Postives = 91/203 (44.83%), Query Frame = 0
BLAST of Chy6G109510 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 9.1e-15 Identity = 58/208 (27.88%), Postives = 88/208 (42.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|