Chy6G106540 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACTTCCTGCAGCGCCGGTTCAGTATTCTTTCTACTCTACTTTCTTTTTGCTATCTACTATTTCTTCACCTTTTTAAGGTCGATCTACTGATTGCGTCCTTACAACCAGCATCGGTGACTTAGAACAAGTTGTTTATTCTTCTTTTAATTGCAAATTAAGTGGATCCAAATGTTTGTTTGTGGATTGCGTGAAATAGTATCAACTCTGAAATTCAATTATCGTGTTCATAATTAGCTAATCATATGGAAGTCTAGGAATATCGGTTTTGGACTTTGTAGCGTTTACCTGCCATCTCAAATTTACGGTTTAAGTATGGAATATGGTTTCTTGGTTGTCTCTTCTCAAAATAATTGATCATATTGTGGAATGGAATTTGGATAGAAACTGAAGCATGGTAGTTTGATTTTTTTGCATATGCTATGGTTGTTGAAGCAAGACTCTATTGAGTAGGAAACTATAGATACCAGTGGATGTACTGTCTTACTATAGTTTTCTATATTCCAAAACGCGATTCTAAGAATCTTCAAGTTTGAATTATAGTTGATAAAAAAATTGAGCTAAACTCAGAGCGGTGTAATCGCTTAAGATTTAAGTAGGAGATTATAAATATTTTTTTAAAAAAAGGTTGGAGATTATAAATTTATGCTCTGTGTCTGACTTAGATCAGAAAAAGAATCAAATGCCACAATATAAGACAATTGTTAGGTCTTTATTTTTTGACCGAATTAGTCTTTGTTTTATTAAACCTATTTTGTTTCTCCTACAAATGCCACAATATAAGACAATAAGTTGTTCTGTAACAGGTCCTGTGGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTTTTTTTAATTACTATTCACTTCCCTCCCGATTATCCATTTAAGCCTCCCAAGGTATGGCATAAAATCTTACATATCTGTTTATGGTCAACATTTTCTGTAGCCCGTTATTACCGGTTTGTGTCATTTGAAATAATTTGGTTCTTGTTTCATTGGTTTCTCTAGTGGCTTCAATATATGTGTGTTGTCACTGTGGTTAGATCTTATTTGATTAAAAACTTAGTGAAGTCGGTGCTGGAAGTTGTTTGCACACTTCTTGAGCTAAACAGTTCAGTTGCCATTGCTTAACTGTGCTGATTGTTTTTGGAGGTCATTCGGGTAAATAATTTACCATCTAATATCTGCCAATTATATTTTGTGGCAGATGTATTGACCACACAAAGGCCACACTCTGAAAACTTAATATATAAACCACATATCGCATTTGAGGTTATTGAAATAGGCTTACTGCCTATTTGACCATAGTAAGCACTATTTGTAGCTGAATGTAAGAACTCGATTTGGGAAGGTAAGTGTGATGACATCATTTAGGTCAGTTAAGTATAACTCAAAGCTTTGTTTTATCTAGAGGTCTTGTTAGGTTCTGGGGCACCCATTTGTGGATGGAGCTCCCTTTTTTCTTGAGTTTGGCTAGAGTTCAAATCCTGGGAGTTTGTTTCTTAATTTCAGGAATTTTTATCTCTGATCTAATGTGGAACCATAGGTTCTTTTTGTAGACCCTAAATCATGGTGGGCTGATCGCGCCCGGCAGACTTCAGGGTCGAAATCCTAAAATCTGTCTCCCTTGAGTGGTGCAATGTGTGCAGGTCTAACTTTGAAGATATCTTCTCAATTTTTGTGGTGCCCTTGTACCTAGAGCATGTGGAGGTGTATTTTTTTTATATTTCAATTTCGAGGTGGTTTTCGCTATACATCAATATTTTATTCTCGTGTGAGGAGGTCATCCATTTAAAGGAAAGAGCTAGTATCAAGGTCATCTTTTGGGAGAATTGGCTGGAAAGAAATAGCAGAAACTTTCGAGGGATAAATATGGGTTTTTTTATGCAATTTTGAGATCTCTTTTCTTATGTTGCTCCTTCTAGTAGTGGTTTTGATTAAGTTTTGCTAATTGGAGACTTTTTGCCACTGGCTGTAGTGGGAGAAGAAGTCTTTTCTTTCCCTTCTCTTCTGTTTTCCTTCTTTCTTTATAAAATTTTGAGTTTTTTGAGCTTGTACTATTATTTCTATAGATCATTAATTATGCCACTTTATATAGGCCATAGGGAGTCTTTACGTATAAGTTTTCACGTTGTTTCAATTTATTTTTGTTTAGGTTGCTTTCAGGACAAAAGTTTTTCACCCAAACATCAACAGTAATGGTAGTATTTGCCTGGACATCTTGAAAGAGCAATGGAGTCCTGCTTTGACTATATCAAAGGTTTTGACCTCTTGACAATTTTGACATTCAAGTCCTTGATGTTTGAAATCCATTATCACATGCCTCATTTGCACCATGGCTTTGGATCAAATTCTTTAAATTAAGTGTCGGGCAGCATTTATGATTTTCTTGCTTTACTAGGGATTTAAGACACTAAACTGATTACTTATATTAAAGATGAAAAAAACCCACTAAGTTGATTTATTATCGTTCCTGAATCCTGATGACTGATACTAACTTAGCATATTTAATAATGCGATTGGCAATTGTACTAAGGGTGATCAACACTGATGTACAGTTTTTCACATTTCATGTCATCTTTATTTCATATCAGTACTTTTTTTAACGTTGCATTCCAGTTCTAGTAATAAAAAAAATTGTTAGGAGAAGCAGAAATGATATAAAAAAAAAATTAAATCCAAGAACTCGTCATGTGAAAACAAAGCTAAGCTATCAACTTAGACCAAATACTGAAAAAGTAGGATGCGGTTATATTTGACACACAACAAAAGTTTGGGGCATACGAAATTTAGATATGCAGCTTTTGCCATCAAAATCCTGGTGGGGAATAAGAGGATGGGTGACAGCATGATATTCTGGTTAGATTTCAGTTTTTGGGAACTTCATACTGTAAACTTGGAAGGGTTACTTAGCATTTAAGGGGTGAAATGGGTGTCAGTGGTCGCCGTCCACTGTTGACATGGGGAGATCGTGGTCTGTAATTCTGAGTCTGTTTTCCTCTGCTAAAATTCCAGATCTTTCCTAATTTGGTCGGTATGCTGCATCTTATTTTTTAGAATATTGGGATCATTGTCTGCTCTGCAGTGTCTTTGACAAACATCTTTGAGAATAGGGAATGACTATCAATGATTTTCTGCATGTGAATTTCATTATGTTCCTAGCTCTGATTAATGCCACATACAGTTTTTAAGTCTGTTGGGAAGGGTTGTTTCATATTCAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACCGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAGAAATATGCTATGGGCTAGTATGTATTATGGGAAGGGCATGAGGGATGTTGCTGTTAGTTCTCATGTATAAATGAAAGTTTTCTGTACAATCTACTATTGTGGGAGATTGAAATAATTCTATGTTGTCCAATTTGAATCAACCTGATGCTTTAAGTCTGTGTTTCGACTAATATATACCAATTATATGGAATTGATTTTGTACAGTTCTGTGACCTGTGATTCTTAA ATGGCGTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACTTCCTGCAGCGCCGGTCCTGTGGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTTTTTTTAATTACTATTCACTTCCCTCCCGATTATCCATTTAAGCCTCCCAAGGTTGCTTTCAGGACAAAAGTTTTTCACCCAAACATCAACAGTAATGGTAGTATTTGCCTGGACATCTTGAAAGAGCAATGGAGTCCTGCTTTGACTATATCAAAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACCGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAGAAATATGCTATGGGCTATTCTGTGACCTGTGATTCTTAA ATGGCGTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACTTCCTGCAGCGCCGGTCCTGTGGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGCCCTCCAGACAGTCCTTATGCAGGAGGGGTTTTTTTAATTACTATTCACTTCCCTCCCGATTATCCATTTAAGCCTCCCAAGGTTGCTTTCAGGACAAAAGTTTTTCACCCAAACATCAACAGTAATGGTAGTATTTGCCTGGACATCTTGAAAGAGCAATGGAGTCCTGCTTTGACTATATCAAAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACCGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAGAAATATGCTATGGGCTATTCTGTGACCTGTGATTCTTAA MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMGYSVTCDS* Homology
BLAST of Chy6G106540 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 6.1e-82 Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 1.8e-81 Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.1e-80 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.1e-80 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.0e-80 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy TrEMBL
Match: A0A5A7TZB8 (Ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005180 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy TrEMBL
Match: E5GCG7 (Ubiquitin conjugating enzyme OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy TrEMBL
Match: A0A0A0L608 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G120380 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy TrEMBL
Match: A0A6J1EFE0 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111432010 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. ExPASy TrEMBL
Match: A0A1S3AVT6 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483220 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. NCBI nr
Match: XP_004133832.1 (ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus] >XP_008437957.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Cucumis melo] >XP_022924565.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_023526807.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo] >ADN34166.1 ubiquitin conjugating enzyme [Cucumis melo subsp. melo] >KAA0048922.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucumis melo var. makuwa] >KAG6582648.1 hypothetical protein SDJN03_22650, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019044.1 hypothetical protein SDJN02_20921 [Cucurbita argyrosperma subsp. argyrosperma] >TYK17646.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucumis melo var. makuwa]) HSP 1 Score: 310 bits (795), Expect = 1.17e-106 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. NCBI nr
Match: XP_022147328.1 (ubiquitin-conjugating enzyme E2-17 kDa-like isoform X1 [Momordica charantia]) HSP 1 Score: 310 bits (794), Expect = 1.67e-106 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. NCBI nr
Match: XP_038892163.1 (ubiquitin-conjugating enzyme E2-17 kDa-like isoform X1 [Benincasa hispida]) HSP 1 Score: 309 bits (791), Expect = 4.78e-106 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Chy6G106540 vs. NCBI nr
Match: XP_003633968.1 (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Vitis vinifera] >XP_007218561.1 ubiquitin-conjugating enzyme E2-17 kDa [Prunus persica] >XP_008233222.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Prunus mume] >XP_010109445.1 ubiquitin-conjugating enzyme E2-17 kDa [Morus notabilis] >XP_010661877.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Vitis vinifera] >XP_012488739.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium raimondii] >XP_012488740.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium raimondii] >XP_015888845.1 ubiquitin-conjugating enzyme E2-17 kDa [Ziziphus jujuba] >XP_015889380.1 ubiquitin-conjugating enzyme E2-17 kDa [Ziziphus jujuba] >XP_016710561.1 ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_016710562.1 ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_017612195.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium arboreum] >XP_018813336.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Juglans regia] >XP_018827925.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Juglans regia] >XP_020573477.1 ubiquitin-conjugating enzyme E2-17 kDa [Phalaenopsis equestris] >XP_020696552.1 ubiquitin-conjugating enzyme E2-17 kDa [Dendrobium catenatum] >XP_020701147.1 ubiquitin-conjugating enzyme E2-17 kDa [Dendrobium catenatum] >XP_020701148.1 ubiquitin-conjugating enzyme E2-17 kDa [Dendrobium catenatum] >XP_021807991.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Prunus avium] >XP_028770394.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Prosopis alba] >XP_028770395.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Prosopis alba] >XP_028791957.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Prosopis alba] >XP_030489350.1 ubiquitin-conjugating enzyme E2-17 kDa [Cannabis sativa] >XP_034202805.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Prunus dulcis] >XP_034693187.1 ubiquitin-conjugating enzyme E2-17 kDa [Vitis riparia] >XP_034693189.1 ubiquitin-conjugating enzyme E2-17 kDa [Vitis riparia] >XP_034709265.1 ubiquitin-conjugating enzyme E2-17 kDa [Vitis riparia] >XP_041011615.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Juglans microcarpa x Juglans regia] >XP_042424845.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042424846.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042424847.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042424848.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042430543.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042430544.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042430545.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042430546.1 ubiquitin-conjugating enzyme E2-17 kDa [Zingiber officinale] >XP_042965830.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Carya illinoinensis] >XP_042980951.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Carya illinoinensis] >KAB2001850.1 hypothetical protein ES319_D11G024000v1 [Gossypium barbadense] >KAE7999404.1 hypothetical protein FH972_003837 [Carpinus fangiana] >KAF3439906.1 hypothetical protein FNV43_RR18184 [Rhamnella rubrinervis] >MBA0787037.1 hypothetical protein [Gossypium trilobum] >MBA0860856.1 hypothetical protein [Gossypium schwendimanii] >PON34138.1 Ubiquitin-fold modifier-conjugating enzyme [Parasponia andersonii] >PON81834.1 Ubiquitin-fold modifier-conjugating enzyme [Trema orientale] >TYG43537.1 hypothetical protein ES288_D11G025400v1 [Gossypium darwinii] >TYH98868.1 hypothetical protein ES332_A11G027100v1 [Gossypium tomentosum] >TYI53729.1 hypothetical protein E1A91_D11G025000v1 [Gossypium mustelinum] >CAB4270189.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 307 bits (787), Expect = 1.95e-105 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Chy6G106540 vs. NCBI nr
Match: XP_016686350.1 (ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_040961384.1 ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >KAG4118559.1 hypothetical protein ERO13_D11G023400v2 [Gossypium hirsutum] >TYH41882.1 hypothetical protein ES332_D11G024700v1 [Gossypium tomentosum]) HSP 1 Score: 306 bits (785), Expect = 3.93e-105 Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Chy6G106540 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 303.1 bits (775), Expect = 1.3e-82 Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Chy6G106540 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 ) HSP 1 Score: 303.1 bits (775), Expect = 1.3e-82 Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Chy6G106540 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 300.4 bits (768), Expect = 8.2e-82 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Chy6G106540 vs. TAIR 10
Match: AT5G41700.1 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 300.4 bits (768), Expect = 8.2e-82 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Chy6G106540 vs. TAIR 10
Match: AT5G41700.5 (ubiquitin conjugating enzyme 8 ) HSP 1 Score: 300.4 bits (768), Expect = 8.2e-82 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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