Chy5G104780 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G104780
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH05: 18240716 .. 18242092 (-)
RNA-Seq Expression	Chy5G104780
Synteny	Chy5G104780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCTCCATTCCCTCTCATGCCACGGTAAACTCCATCGTTACTACCAATTTCAAATCTCGAATACTTCCATTTCATTTTCCGGTCGTCAAATCCTTCCGATCGACACCCTTGTCTACCAATGCTCTCTCCAATTCCCGTTTTCGGAAGTCTGCCCGCCAGTACGACGCTCAAAGCACCAAGAACACTCTCTCCAAATCTCAAAACCAAACCAGCGATTCTGTCTATAGTCTTCCATCGACGGTGGATTTACTGGCTCTGTGCGAGGAGGGTAAGGTAATTGACGCTCTGGAATACATTGGCCAAGGTGCTAAAGTCGACTATGGCATTTTTACTGCTTTGTTGAATTCTTGTTGTAATTTGAAGTTGCTTGAGGCCGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGGGATGCGGAATTGAACAATCGGTTGATAGAAGTGTATTCGAAATGTGGCTGTATGAAAGATGCACGTAAGGTGTTTGATAAAATGCCTAACAAGGATACTAGGAGTTGGAATTTGATGATCAAAGGGTATGGAGATAATGGGGAAGGGGATAATGGGTTGGCATTGTTTGAGCAAATGAAGAATGTTGGTTTGCAACCAAATTCAGAAACGTTTCTGGTGGTTTTAGCTGCTTGTGCCATGGCTGAAGCTGTGAAGGAAGGTGTATTTTACTTCAAAATAATGGCAAATGAATATGGAATCAATCCTGAGATTGAACATTATTTGGGAGTTGTTGATGTTCTTGGAAAATCTGGTCATTTGATTGAAGCTGAGGAGTTCATTGAGAAAATGCCCATCAATCCCACAGCTAAAATTTGGGATGCCCTTAGAAACTACGCTCGACTGCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCACGATGTCCACAACTATCAAACCATCACTCCCTCCACGGAGGAAGCAATCAAGCACGAACATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGGTGTGCAATGCCTTATAAAGAAGAGGGTGAAGGGAGGCTGAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTTCCGGATACAAGATATGTGCTACACGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGGCTAGCTATTGCTTATGGATTGATCAGTACACCAGCAAGAACGACACTGAGGATCATCAAGAATCTTCGAATTTGCGGCGATTGTCATAATGCAATCAAAATCATGTCAAAGATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGACGGAAAATGCTCTTGTGGGGATTACTGGTAA

mRNA sequence

ATGTCTTCCTCCATTCCCTCTCATGCCACGGTAAACTCCATCGTTACTACCAATTTCAAATCTCGAATACTTCCATTTCATTTTCCGGTCGTCAAATCCTTCCGATCGACACCCTTGTCTACCAATGCTCTCTCCAATTCCCGTTTTCGGAAGTCTGCCCGCCAGTACGACGCTCAAAGCACCAAGAACACTCTCTCCAAATCTCAAAACCAAACCAGCGATTCTGTCTATAGTCTTCCATCGACGGTGGATTTACTGGCTCTGTGCGAGGAGGGTAAGGTAATTGACGCTCTGGAATACATTGGCCAAGGTGCTAAAGTCGACTATGGCATTTTTACTGCTTTGTTGAATTCTTGTTGTAATTTGAAGTTGCTTGAGGCCGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGGGATGCGGAATTGAACAATCGGTTGATAGAAGTGTATTCGAAATGTGGCTGTATGAAAGATGCACGTAAGGTGTTTGATAAAATGCCTAACAAGGATACTAGGAGTTGGAATTTGATGATCAAAGGGTATGGAGATAATGGGGAAGGGGATAATGGGTTGGCATTGTTTGAGCAAATGAAGAATGTTGGTTTGCAACCAAATTCAGAAACGTTTCTGGTGGTTTTAGCTGCTTGTGCCATGGCTGAAGCTGTGAAGGAAGGTGTATTTTACTTCAAAATAATGGCAAATGAATATGGAATCAATCCTGAGATTGAACATTATTTGGGAGTTGTTGATGTTCTTGGAAAATCTGGTCATTTGATTGAAGCTGAGGAGTTCATTGAGAAAATGCCCATCAATCCCACAGCTAAAATTTGGGATGCCCTTAGAAACTACGCTCGACTGCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCACGATGTCCACAACTATCAAACCATCACTCCCTCCACGGAGGAAGCAATCAAGCACGAACATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGGTGTGCAATGCCTTATAAAGAAGAGGGTGAAGGGAGGCTGAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTTCCGGATACAAGATATGTGCTACACGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGGCTAGCTATTGCTTATGGATTGATCAGTACACCAGCAAGAACGACACTGAGGATCATCAAGAATCTTCGAATTTGCGGCGATTGTCATAATGCAATCAAAATCATGTCAAAGATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGACGGAAAATGCTCTTGTGGGGATTACTGGTAA

Coding sequence (CDS)

ATGTCTTCCTCCATTCCCTCTCATGCCACGGTAAACTCCATCGTTACTACCAATTTCAAATCTCGAATACTTCCATTTCATTTTCCGGTCGTCAAATCCTTCCGATCGACACCCTTGTCTACCAATGCTCTCTCCAATTCCCGTTTTCGGAAGTCTGCCCGCCAGTACGACGCTCAAAGCACCAAGAACACTCTCTCCAAATCTCAAAACCAAACCAGCGATTCTGTCTATAGTCTTCCATCGACGGTGGATTTACTGGCTCTGTGCGAGGAGGGTAAGGTAATTGACGCTCTGGAATACATTGGCCAAGGTGCTAAAGTCGACTATGGCATTTTTACTGCTTTGTTGAATTCTTGTTGTAATTTGAAGTTGCTTGAGGCCGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGGGATGCGGAATTGAACAATCGGTTGATAGAAGTGTATTCGAAATGTGGCTGTATGAAAGATGCACGTAAGGTGTTTGATAAAATGCCTAACAAGGATACTAGGAGTTGGAATTTGATGATCAAAGGGTATGGAGATAATGGGGAAGGGGATAATGGGTTGGCATTGTTTGAGCAAATGAAGAATGTTGGTTTGCAACCAAATTCAGAAACGTTTCTGGTGGTTTTAGCTGCTTGTGCCATGGCTGAAGCTGTGAAGGAAGGTGTATTTTACTTCAAAATAATGGCAAATGAATATGGAATCAATCCTGAGATTGAACATTATTTGGGAGTTGTTGATGTTCTTGGAAAATCTGGTCATTTGATTGAAGCTGAGGAGTTCATTGAGAAAATGCCCATCAATCCCACAGCTAAAATTTGGGATGCCCTTAGAAACTACGCTCGACTGCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCACGATGTCCACAACTATCAAACCATCACTCCCTCCACGGAGGAAGCAATCAAGCACGAACATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGGTGTGCAATGCCTTATAAAGAAGAGGGTGAAGGGAGGCTGAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTTCCGGATACAAGATATGTGCTACACGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGGCTAGCTATTGCTTATGGATTGATCAGTACACCAGCAAGAACGACACTGAGGATCATCAAGAATCTTCGAATTTGCGGCGATTGTCATAATGCAATCAAAATCATGTCAAAGATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGACGGAAAATGCTCTTGTGGGGATTACTGGTAA

Protein sequence

MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQSTKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW*

Homology

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BLAST of Chy5G104780 vs. ExPASy Swiss-Prot
Match: Q9ZQE5 (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)

HSP 1 Score: 421.4 bits (1082), Expect = 1.3e-116
Identity = 215/414 (51.93%), Postives = 281/414 (67.87%), Query Frame = 0


Query: 45  SNSRFRKSARQYDAQSTKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQG 104
           + S++    +Q   Q  +++ ++S NQ ++ V   PS  +++ LC+     DA+E + +G
Sbjct: 174 NQSQYYTPQQQQQPQPPRSS-NQSPNQMNE-VAPPPSVEEVMRLCQRRLYKDAIELLDKG 233

Query: 105 AKVDYGIFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDAR 164
           A  D   F  L  SC NLK LE  ++V      +KFRGD +LNN +I ++ +C  + DA+
Sbjct: 234 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 293

Query: 165 KVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAE 224
           +VFD M +KD  SW+LM+  Y DNG GD+ L LFE+M   GL+PN ETFL V  ACA   
Sbjct: 294 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 353

Query: 225 AVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDAL 284
            ++E   +F  M NE+GI+P+ EHYLGV+ VLGK GHL+EAE++I  +P  PTA  W+A+
Sbjct: 354 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 413

Query: 285 RNYARLHGNMELEDRAEELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCA 344
           RNYARLHG+++LED  EELM  +DPS       P+ PP +    TNM+  K R+ EFR  
Sbjct: 414 RNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPT-PPPKSFKETNMVTSKSRILEFRNL 473

Query: 345 MPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTP 404
             YK+E +  +    G +    YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP
Sbjct: 474 TFYKDEAK-EMAAKKGVV----YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTP 533

Query: 405 ARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            R TL IIKNLR+CGDCHN IKIMSKI+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 534 PRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

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BLAST of Chy5G104780 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.6e-77
Identity = 167/461 (36.23%), Postives = 250/461 (54.23%), Query Frame = 0


Query: 27  HFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQSTKNTLSKSQNQTSDS-VYSLPSTVDL 86
           H  ++ +     L +N LS++    S       S  N +  ++    +S   SLPS   +
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASV--STALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 393

Query: 87  LA-LCEEGKVIDALEYIGQGAKVDYG----IFTALLNSCCNLKLLEAGRRVDGLLKGTKF 146
           ++   + G   DA+    +  K ++       T +L++C  L  L  G+ V  L++ T F
Sbjct: 394 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 453

Query: 147 RGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQ 206
                ++  LI +Y+KCG + +AR++FD M  K+  +WN MI GYG +G+G   L +F +
Sbjct: 454 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 513

Query: 207 MKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSG 266
           M N G+ P   TFL VL AC+ A  VKEG   F  M + YG  P ++HY  +VD+LG++G
Sbjct: 514 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 573

Query: 267 HLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTM-------- 326
           HL  A +FIE M I P + +W+ L    R+H +  L     E +F LDP  +        
Sbjct: 574 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 633

Query: 327 ----------STTIKPSLPPRR--KQSSTNMLEEKDRVREFRC---AMPYKEEGEGRLKG 386
                     + T++ +   R+  K     ++E  +    F     + P  +E   +L+ 
Sbjct: 634 IHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEK 693

Query: 387 LNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRI 446
           L G+MREAGY P+T   LHD++EE ++  ++ HSERLAIA+GLI+T   T +RIIKNLR+
Sbjct: 694 LEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRV 753

Query: 447 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           C DCH   K++SKI  R ++VRD  RFHHFKDG CSCGDYW
Sbjct: 754 CLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]

BLAST of Chy5G104780 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 6.0e-77
Identity = 158/396 (39.90%), Postives = 229/396 (57.83%), Query Frame = 0


Query: 90  EEGKVIDALEYIGQ--GAKVDYG--IFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAE 149
           + G+  +AL    Q   AKV  G   F++++ +C +L  L  G+++ G +    F  +  
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 150 LNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVG 209
           + + L+++YSKCG +K ARK+FD+M   D  SW  +I G+  +G G   ++LFE+MK  G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439

Query: 210 LQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEA 269
           ++PN   F+ VL AC+    V E   YF  M   YG+N E+EHY  V D+LG++G L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499

Query: 270 EEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTMSTTI--------- 329
             FI KM + PT  +W  L +   +H N+EL ++  E +F++D   M   +         
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559

Query: 330 -------KPSLPPR----RKQSSTNMLEEKDRVREFRC---AMPYKEEGEGRLKGLNGQM 389
                  K  L  R    RK+ + + +E K++   F     + P  ++    LK +  QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619

Query: 390 REAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCH 449
            + GYV DT  VLHD+DEE K++ L  HSERLA+A+G+I+T   TT+R+ KN+RIC DCH
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679

Query: 450 NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            AIK +SKI  RE+IVRDN RFHHF  G CSCGDYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]

BLAST of Chy5G104780 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.9e-76
Identity = 146/379 (38.52%), Postives = 224/379 (59.10%), Query Frame = 0


Query: 103 QGAKVDYGIFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKD 162
           +G +++   F++ L++C ++  LE G+++ G L    +     + N L+ +Y KCG +++
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 163 ARKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAM 222
           A  +F +M  KD  SWN MI GY  +G G+  L  FE MK  GL+P+  T + VL+AC+ 
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 223 AEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWD 282
              V +G  YF  M  +YG+ P  +HY  +VD+LG++G L +A   ++ MP  P A IW 
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 283 ALRNYARLHGNMELEDRAEELMFSLDPSTMSTTIKPS--------------LPPR----- 342
            L   +R+HGN EL + A + +F+++P      +  S              L  R     
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 343 -RKQSSTNMLEEKDRVREFRCA---MPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDID 402
            +K    + +E +++   F       P K+E    L+ L+ +M++AGYV  T  VLHD++
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 403 EEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 459
           EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

[Close]

BLAST of Chy5G104780 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.5e-75
Identity = 146/378 (38.62%), Postives = 224/378 (59.26%), Query Frame = 0


Query: 104 GAKVDYGIFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDA 163
           G +  +  + +L  +C +   LE G+ V   +  +  +  A   N L+++Y+K G + DA
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316

Query: 164 RKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMA 223
           RK+FD++  +D  SWN ++  Y  +G G   +  FE+M+ VG++PN  +FL VL AC+ +
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376

Query: 224 EAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDA 283
             + EG  Y+++M  + GI PE  HY+ VVD+LG++G L  A  FIE+MPI PTA IW A
Sbjct: 377 GLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKA 436

Query: 284 LRNYARLHGNMELEDRAEELMFSLDPSTMSTTI--------------------KPSLPPR 343
           L N  R+H N EL   A E +F LDP      +                    K      
Sbjct: 437 LLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGV 496

Query: 344 RKQSSTNMLEEKDRVREFRC---AMPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDE 403
           +K+ + + +E ++ +  F       P +EE   + + +  +++E GYVPDT +V+  +D+
Sbjct: 497 KKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQ 556

Query: 404 EAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 459
           + ++  LQYHSE++A+A+ L++TP  +T+ I KN+R+CGDCH AIK+ SK+VGRE+IVRD
Sbjct: 557 QEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 616

[Close]

BLAST of Chy5G104780 vs. ExPASy TrEMBL
Match: A0A0A0LEV9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000530 PE=3 SV=1)

HSP 1 Score: 888.6 bits (2295), Expect = 1.1e-254
Identity = 442/458 (96.51%), Postives = 446/458 (97.38%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MSSSIPSHATVNS  TTNFKSRILPFHFPV+KSFRST LSTNALSNSRFRKSA QYDAQS
Sbjct: 1   MSSSIPSHATVNSTATTNFKSRILPFHFPVLKSFRSTLLSTNALSNSRFRKSAHQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLSKSQN+TSDSVYSLPSTVDLLALCEEGKVID LEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVYSLPSTVDLLALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNNRLIE+YS CGCMKDARKVFDKM NKDT SWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYGDNGEGDNGLALFEQMKN GLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY
Sbjct: 181 MIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST STTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG
Sbjct: 301 EELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. ExPASy TrEMBL
Match: A0A5A7V2K9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00600 PE=3 SV=1)

HSP 1 Score: 871.3 bits (2250), Expect = 1.8e-249
Identity = 430/458 (93.89%), Postives = 444/458 (96.94%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MSSSI SHATVNSI TTNFKS I+P HFP VKSFRSTPLSTNALSNSRFRK+ARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLS+SQNQTSDSVYS PSTVDLLALC+EGKVIDALEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNN+LIE+YS CGCMK+ARKVFDKMPNKDTR+WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYG+NGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST +TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. ExPASy TrEMBL
Match: A0A1S3C9A6 (pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=3656 GN=LOC103498440 PE=3 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 1.1e-248
Identity = 427/458 (93.23%), Postives = 444/458 (96.94%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MSSSI SHATVNSI TTNFKS I+P HFP VKSFRSTPLSTNALSNSRFRK+ARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLS+SQNQTSDSVYS PSTVDLLALCEEGKVIDALEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNN+LIE+YS CGCMK+ARKVFDKMPNKDTR+WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYG+NGEGDNGLALFE+MKNVGLQPNSETFLV+LAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST +TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. ExPASy TrEMBL
Match: A0A5D3CFT5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00860 PE=3 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 5.7e-248
Identity = 426/458 (93.01%), Postives = 443/458 (96.72%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MS SI SHATVNSI TTNFKS I+P HFP VKSFRSTPLSTNALSNSRFRK+ARQYDAQS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLS+SQNQTSDSVYS PSTVDLLALCEEGKVIDALEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNN+LIE+YS CGCMK+ARKVFDKMPNKDTR+WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYG+NGEGDNGLALFE+MKNVGLQPNSETFLV+LAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST +TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. ExPASy TrEMBL
Match: A0A6J1FC52 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444273 PE=3 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 3.9e-220
Identity = 386/459 (84.10%), Postives = 414/459 (90.20%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           M+SSIPS  T NSI+TTNF SRI+PFH P VKSFR T    N+LSNS  RK AR+YD Q+
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNSLSNSSNRKPARRYDGQT 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLSKSQN+TSDSV SLPSTVDL+ALCE G+V+D LE+IGQGA +DYGI TALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           N KLLEAGRRVD LLKGTKF GD  LNN LIE+YS CGCMKDAR+VFDKMP++D R+WNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNNLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYG+NGEGD GLALFE+MK+VGLQPNSETFLVVLAACAMAEAV+EG+FYF  M NEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGVVDVLGKSGHLIEAEEFI+K+PINPTAKIWDALR YARLHGN+ELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGE-GRLKGLN 360
           EEL+FS DPS   T  KP L P RKQS+TNMLEEKDRVREFRCAMPYKEEGE G+LKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLLPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459

[Close]

BLAST of Chy5G104780 vs. NCBI nr
Match: XP_004141167.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sativus])

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 442/458 (96.51%), Postives = 446/458 (97.38%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MSSSIPSHATVNS  TTNFKSRILPFHFPV+KSFRST LSTNALSNSRFRKSA QYDAQS
Sbjct: 1   MSSSIPSHATVNSTATTNFKSRILPFHFPVLKSFRSTLLSTNALSNSRFRKSAHQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLSKSQN+TSDSVYSLPSTVDLLALCEEGKVID LEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSKSQNRTSDSVYSLPSTVDLLALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNNRLIE+YS CGCMKDARKVFDKM NKDT SWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYGDNGEGDNGLALFEQMKN GLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY
Sbjct: 181 MIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST STTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG
Sbjct: 301 EELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. NCBI nr
Match: KAA0061500.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 869 bits (2246), Expect = 0.0
Identity = 430/458 (93.89%), Postives = 444/458 (96.94%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MSSSI SHATVNSI TTNFKS I+P HFP VKSFRSTPLSTNALSNSRFRK+ARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLS+SQNQTSDSVYS PSTVDLLALC+EGKVIDALEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNN+LIE+YS CGCMK+ARKVFDKMPNKDTR+WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYG+NGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST +TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. NCBI nr
Match: XP_008459269.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis melo])

HSP 1 Score: 867 bits (2239), Expect = 0.0
Identity = 427/458 (93.23%), Postives = 444/458 (96.94%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MSSSI SHATVNSI TTNFKS I+P HFP VKSFRSTPLSTNALSNSRFRK+ARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLS+SQNQTSDSVYS PSTVDLLALCEEGKVIDALEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNN+LIE+YS CGCMK+ARKVFDKMPNKDTR+WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYG+NGEGDNGLALFE+MKNVGLQPNSETFLV+LAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST +TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. NCBI nr
Match: TYK10773.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 864 bits (2233), Expect = 1.68e-315
Identity = 426/458 (93.01%), Postives = 443/458 (96.72%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MS SI SHATVNSI TTNFKS I+P HFP VKSFRSTPLSTNALSNSRFRK+ARQYDAQS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLS+SQNQTSDSVYS PSTVDLLALCEEGKVIDALEYIGQGAKVDYG+FTALLNSCC
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRVDGLLKGTKFRGD ELNN+LIE+YS CGCMK+ARKVFDKMPNKDTR+WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYG+NGEGDNGLALFE+MKNVGLQPNSETFLV+LAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPST +TT KPSLPPRRKQSSTNMLEEKDRVREFR AMPYKEEGEG+LKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. NCBI nr
Match: XP_038889181.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 847 bits (2189), Expect = 7.06e-309
Identity = 415/458 (90.61%), Postives = 436/458 (95.20%), Query Frame = 0


Query: 1   MSSSIPSHATVNSIVTTNFKSRILPFHFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQS 60
           MSSSIP HA  NS++T NFKSR LP HFP  KSFRSTPL TNALSNSRFRK+ RQYD QS
Sbjct: 1   MSSSIPPHAAGNSVITANFKSRSLPIHFPTAKSFRSTPLCTNALSNSRFRKAVRQYDDQS 60

Query: 61  TKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQGAKVDYGIFTALLNSCC 120
           T NTLSKSQNQTSDSVYSLPSTVDL+ALCEEGKVIDALEYIGQGA VDYG+FTALLNSCC
Sbjct: 61  TANTLSKSQNQTSDSVYSLPSTVDLMALCEEGKVIDALEYIGQGANVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNL 180
           NLKLLEAGRRV+G+LKGT FRGD ELNN+LIEVYS CGCMKDARKVFDKMP++DTR+WNL
Sbjct: 121 NLKLLEAGRRVNGVLKGTNFRGDVELNNKLIEVYSTCGCMKDARKVFDKMPDRDTRTWNL 180

Query: 181 MIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240
           MIKGYGDNGEGD+GLALFEQMKNVGLQPN ETFLVVLAACA+AEAV+EG+FYF IM NEY
Sbjct: 181 MIKGYGDNGEGDDGLALFEQMKNVGLQPNPETFLVVLAACAIAEAVEEGLFYFNIMENEY 240

Query: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGVVDVLGK GHLIEAEEFIEKMPINPTAK+WDALRNYARLHGNMELEDRA
Sbjct: 241 GISPEIEHYLGVVDVLGKFGHLIEAEEFIEKMPINPTAKLWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360
           EELMFSLDPSTM+TTIKP LPPRRK SSTNMLEEKDRVREFRCAMPYKE+GEG+LKGLNG
Sbjct: 301 EELMFSLDPSTMATTIKPPLPPRRKDSSTNMLEEKDRVREFRCAMPYKEKGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           Q+REAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QIREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Chy5G104780 vs. TAIR 10
Match: AT2G15690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 421.4 bits (1082), Expect = 9.3e-118
Identity = 215/414 (51.93%), Postives = 281/414 (67.87%), Query Frame = 0


Query: 45  SNSRFRKSARQYDAQSTKNTLSKSQNQTSDSVYSLPSTVDLLALCEEGKVIDALEYIGQG 104
           + S++    +Q   Q  +++ ++S NQ ++ V   PS  +++ LC+     DA+E + +G
Sbjct: 174 NQSQYYTPQQQQQPQPPRSS-NQSPNQMNE-VAPPPSVEEVMRLCQRRLYKDAIELLDKG 233

Query: 105 AKVDYGIFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDAR 164
           A  D   F  L  SC NLK LE  ++V      +KFRGD +LNN +I ++ +C  + DA+
Sbjct: 234 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 293

Query: 165 KVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAE 224
           +VFD M +KD  SW+LM+  Y DNG GD+ L LFE+M   GL+PN ETFL V  ACA   
Sbjct: 294 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 353

Query: 225 AVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDAL 284
            ++E   +F  M NE+GI+P+ EHYLGV+ VLGK GHL+EAE++I  +P  PTA  W+A+
Sbjct: 354 GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 413

Query: 285 RNYARLHGNMELEDRAEELMFSLDPSTMSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCA 344
           RNYARLHG+++LED  EELM  +DPS       P+ PP +    TNM+  K R+ EFR  
Sbjct: 414 RNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPT-PPPKSFKETNMVTSKSRILEFRNL 473

Query: 345 MPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTP 404
             YK+E +  +    G +    YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP
Sbjct: 474 TFYKDEAK-EMAAKKGVV----YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTP 533

Query: 405 ARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            R TL IIKNLR+CGDCHN IKIMSKI+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 534 PRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of Chy5G104780 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 290.0 bits (741), Expect = 3.2e-78
Identity = 167/461 (36.23%), Postives = 250/461 (54.23%), Query Frame = 0


Query: 27  HFPVVKSFRSTPLSTNALSNSRFRKSARQYDAQSTKNTLSKSQNQTSDS-VYSLPSTVDL 86
           H  ++ +     L +N LS++    S       S  N +  ++    +S   SLPS   +
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASV--STALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 393

Query: 87  LA-LCEEGKVIDALEYIGQGAKVDYG----IFTALLNSCCNLKLLEAGRRVDGLLKGTKF 146
           ++   + G   DA+    +  K ++       T +L++C  L  L  G+ V  L++ T F
Sbjct: 394 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 453

Query: 147 RGDAELNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQ 206
                ++  LI +Y+KCG + +AR++FD M  K+  +WN MI GYG +G+G   L +F +
Sbjct: 454 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 513

Query: 207 MKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSG 266
           M N G+ P   TFL VL AC+ A  VKEG   F  M + YG  P ++HY  +VD+LG++G
Sbjct: 514 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 573

Query: 267 HLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTM-------- 326
           HL  A +FIE M I P + +W+ L    R+H +  L     E +F LDP  +        
Sbjct: 574 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 633

Query: 327 ----------STTIKPSLPPRR--KQSSTNMLEEKDRVREFRC---AMPYKEEGEGRLKG 386
                     + T++ +   R+  K     ++E  +    F     + P  +E   +L+ 
Sbjct: 634 IHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEK 693

Query: 387 LNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRI 446
           L G+MREAGY P+T   LHD++EE ++  ++ HSERLAIA+GLI+T   T +RIIKNLR+
Sbjct: 694 LEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRV 753

Query: 447 CGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
           C DCH   K++SKI  R ++VRD  RFHHFKDG CSCGDYW
Sbjct: 754 CLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]

BLAST of Chy5G104780 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 289.7 bits (740), Expect = 4.2e-78
Identity = 158/396 (39.90%), Postives = 229/396 (57.83%), Query Frame = 0


Query: 90  EEGKVIDALEYIGQ--GAKVDYG--IFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAE 149
           + G+  +AL    Q   AKV  G   F++++ +C +L  L  G+++ G +    F  +  
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 150 LNNRLIEVYSKCGCMKDARKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVG 209
           + + L+++YSKCG +K ARK+FD+M   D  SW  +I G+  +G G   ++LFE+MK  G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439

Query: 210 LQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEA 269
           ++PN   F+ VL AC+    V E   YF  M   YG+N E+EHY  V D+LG++G L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499

Query: 270 EEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTMSTTI--------- 329
             FI KM + PT  +W  L +   +H N+EL ++  E +F++D   M   +         
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559

Query: 330 -------KPSLPPR----RKQSSTNMLEEKDRVREFRC---AMPYKEEGEGRLKGLNGQM 389
                  K  L  R    RK+ + + +E K++   F     + P  ++    LK +  QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619

Query: 390 REAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCH 449
            + GYV DT  VLHD+DEE K++ L  HSERLA+A+G+I+T   TT+R+ KN+RIC DCH
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679

Query: 450 NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459
            AIK +SKI  RE+IVRDN RFHHF  G CSCGDYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]

BLAST of Chy5G104780 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 287.0 bits (733), Expect = 2.7e-77
Identity = 146/379 (38.52%), Postives = 224/379 (59.10%), Query Frame = 0


Query: 103 QGAKVDYGIFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKD 162
           +G +++   F++ L++C ++  LE G+++ G L    +     + N L+ +Y KCG +++
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 163 ARKVFDKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAM 222
           A  +F +M  KD  SWN MI GY  +G G+  L  FE MK  GL+P+  T + VL+AC+ 
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 223 AEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWD 282
              V +G  YF  M  +YG+ P  +HY  +VD+LG++G L +A   ++ MP  P A IW 
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 283 ALRNYARLHGNMELEDRAEELMFSLDPSTMSTTIKPS--------------LPPR----- 342
            L   +R+HGN EL + A + +F+++P      +  S              L  R     
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 343 -RKQSSTNMLEEKDRVREFRCA---MPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDID 402
            +K    + +E +++   F       P K+E    L+ L+ +M++AGYV  T  VLHD++
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 403 EEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 459
           EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

[Close]

BLAST of Chy5G104780 vs. TAIR 10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1 )

HSP 1 Score: 282.0 bits (720), Expect = 8.8e-76
Identity = 154/374 (41.18%), Postives = 220/374 (58.82%), Query Frame = 0


Query: 108 DYGIFTALLNSCCNLKLLEAGRRVDGLLKGTKFRGDAELNNRLIEVYSKCGCMKDARKVF 167
           DY  F+++++ C N  LLE GR++ GL   + F   + + + L+ +YSKCG  + A +VF
Sbjct: 217 DYS-FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 276

Query: 168 DKMPNKDTRSWNLMIKGYGDNGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVK 227
           +++P K+   WN M+K Y  +      + LF++MK  G++PN  TFL VL AC+ A  V 
Sbjct: 277 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 336

Query: 228 EGVFYFKIMANEYGINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNY 287
           EG +YF  M  E  I P  +HY  +VD+LG++G L EA E I  MPI+PT  +W AL   
Sbjct: 337 EGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 396

Query: 288 ARLHGNMELEDRAEELMFSLDPSTMSTTIKPS------------------LPPR--RKQS 347
             +H N EL   A + +F L P +    I  S                  L  R  +K++
Sbjct: 397 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 456

Query: 348 STNMLEEKDRVREFRCAMPYKEEGE---GRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQ 407
             + +EE+++V  F       E+ +    +L  L  +M +AGY+ DT YVL ++D + K 
Sbjct: 457 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 516

Query: 408 QALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 459
           Q ++YHSERLAIA+GLI+ PA   +R++KNLR+CGDCHNAIK MS    R +IVRDN RF
Sbjct: 517 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 576

The following BLAST results are available for this feature:

BLAST of Chy5G104780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQE5	1.3e-116	51.93	Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidop...	[more]
Q9SUH6	4.6e-77	36.23	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q9LW63	6.0e-77	39.90	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
Q9SY02	3.9e-76	38.52	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9LIQ7	9.5e-75	38.62	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]

BLAST of Chy5G104780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEV9	1.1e-254	96.51	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G0005...	[more]
A0A5A7V2K9	1.8e-249	93.89	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C9A6	1.1e-248	93.23	pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=36...	[more]
A0A5D3CFT5	5.7e-248	93.01	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1FC52	3.9e-220	84.10	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]

BLAST of Chy5G104780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141167.1	0.0	96.51	pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sa...	[more]
KAA0061500.1	0.0	93.89	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008459269.1	0.0	93.23	PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis m...	[more]
TYK10773.1	1.68e-315	93.01	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_038889181.1	7.06e-309	90.61	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benin...	[more]

BLAST of Chy5G104780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15690.1	9.3e-118	51.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	3.2e-78	36.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	4.2e-78	39.90	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	2.7e-77	38.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G52630.1	8.8e-76	41.18	mitochondrial RNAediting factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 249..272 e-value: 0.27 score: 11.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 173..221 e-value: 4.8E-10 score: 39.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 148..173 e-value: 0.0025 score: 15.9 coord: 177..209 e-value: 1.5E-6 score: 26.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 12.178061
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 346..448 e-value: 3.9E-33 score: 114.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 227..321 e-value: 3.5E-6 score: 28.4 coord: 126..226 e-value: 4.3E-22 score: 80.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..73
None	No IPR available	PANTHER	PTHR24015:SF1685	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 4..453
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 4..453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G104780.1	Chy5G104780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding